RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Rhox8Q6VSS7 320 aa16.49■□□□□ 0.23
Prpf40a-201ENSMUST00000076313 Rpgrip1Q9EPQ2 1331 aa15.32■□□□□ 0.04
Prpf40a-201ENSMUST00000076313 Ehmt2Q9Z148 1263 aaKnown RBP15.2■□□□□ 0.02
Prpf40a-201ENSMUST00000076313 Las1lA2BE28 776 aaKnown RBP14.78□□□□□ -0.04
Prpf40a-201ENSMUST00000076313 Cngb1E1AZ71 1325 aa14.72□□□□□ -0.05
Prpf40a-201ENSMUST00000076313 Wdr66E9Q743 1299 aa14.69□□□□□ -0.06
Prpf40a-201ENSMUST00000076313 Ccdc136Q3TVA9 1136 aa14.68□□□□□ -0.06
Prpf40a-201ENSMUST00000076313 Zeb1Q64318 1117 aa14.61□□□□□ -0.07
Prpf40a-201ENSMUST00000076313 Esf1Q3V1V3 845 aaKnown RBP14.45□□□□□ -0.1
Prpf40a-201ENSMUST00000076313 Gab3Q8BSM5 595 aa14.44□□□□□ -0.1
Prpf40a-201ENSMUST00000076313 Pelp1Q9DBD5 1123 aaKnown RBP14.38□□□□□ -0.11
Prpf40a-201ENSMUST00000076313 Ube2uB1AUC4 352 aa14.36□□□□□ -0.11
Prpf40a-201ENSMUST00000076313 Trim41Q5NCC3 630 aa14.27□□□□□ -0.13
Prpf40a-201ENSMUST00000076313 Acin1Q9JIX8 1338 aaKnown RBP14.22□□□□□ -0.13
Prpf40a-201ENSMUST00000076313 Npm2Q80W85 207 aa14.2□□□□□ -0.14
Prpf40a-201ENSMUST00000076313 Myt1lP97500 1187 aa14.17□□□□□ -0.14
Prpf40a-201ENSMUST00000076313 NischQ80TM9 1593 aa14.17□□□□□ -0.14
Prpf40a-201ENSMUST00000076313 CenpbP27790 599 aa14.1□□□□□ -0.15
Prpf40a-201ENSMUST00000076313 UbtfP25976 765 aaKnown RBP14□□□□□ -0.17
Prpf40a-201ENSMUST00000076313 NefmP08553 848 aa13.99□□□□□ -0.17
Prpf40a-201ENSMUST00000076313 Amer1Q7TS75 1132 aa13.99□□□□□ -0.17
Prpf40a-201ENSMUST00000076313 Slc24a1Q91WD8 1130 aa13.9□□□□□ -0.18
Prpf40a-201ENSMUST00000076313 Ccdc180J3QNE4 1664 aa13.89□□□□□ -0.19
Prpf40a-201ENSMUST00000076313 Pcgf6Q99NA9 353 aa13.85□□□□□ -0.19
Prpf40a-201ENSMUST00000076313 Stra8P70278 393 aa13.83□□□□□ -0.2
Prpf40a-201ENSMUST00000076313 Cdk11bP24788 784 aaKnown RBP13.77□□□□□ -0.21
Prpf40a-201ENSMUST00000076313 Rtl1Q7M732 1744 aa13.74□□□□□ -0.21
Prpf40a-201ENSMUST00000076313 HrcG5E8J6 738 aa13.69□□□□□ -0.22
Prpf40a-201ENSMUST00000076313 Ttbk1Q6PCN3 1308 aa13.68□□□□□ -0.22
Prpf40a-201ENSMUST00000076313 Il27Q8K3I6 234 aa13.63□□□□□ -0.23
Prpf40a-201ENSMUST00000076313 Ppargc1bQ8VHJ7 1014 aa13.63□□□□□ -0.23
Prpf40a-201ENSMUST00000076313 Nop58Q6DFW4 536 aaKnown RBP13.61□□□□□ -0.23
Prpf40a-201ENSMUST00000076313 Supt5hO55201 1082 aaKnown RBP13.6□□□□□ -0.23
Prpf40a-201ENSMUST00000076313 Myt1Q8CFC2 1127 aa13.53□□□□□ -0.24
Prpf40a-201ENSMUST00000076313 Tnnt3Q9QZ47 272 aa13.51□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 Ap3b1Q9Z1T1 1105 aa13.5□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 NclP09405 707 aaKnown RBP13.49□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 Eif5bQ05D44 1216 aaKnown RBP13.49□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 4933416C03RikQ3V063 378 aa13.49□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 Fam50aQ9WV03 339 aaKnown RBP13.48□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 Neurod1Q60867 357 aa13.48□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 NrdcQ8BHG1 1161 aa13.48□□□□□ -0.25
Prpf40a-201ENSMUST00000076313 Abcc9P70170 1546 aa13.44□□□□□ -0.26
Prpf40a-201ENSMUST00000076313 Gm35339A0A140LHH9 1649 aa13.39□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 TonslQ6NZL6 1363 aa13.39□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 NeflP08551 543 aa13.37□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 Zcchc6Q5BLK4 1491 aaKnown RBP13.36□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 Mier1Q5UAK0 511 aa13.36□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 Anp32bQ9EST5 272 aaKnown RBP13.35□□□□□ -0.27
Prpf40a-201ENSMUST00000076313 4930567H17RikQ3V0K5 233 aa13.32□□□□□ -0.28
Prpf40a-201ENSMUST00000076313 Os9Q8K2C7 672 aa13.22□□□□□ -0.29
Prpf40a-201ENSMUST00000076313 Rtl5Q5DTT4 599 aa13.19□□□□□ -0.3
Prpf40a-201ENSMUST00000076313 ClspnQ80YR7 1315 aa13.15□□□□□ -0.3
Prpf40a-201ENSMUST00000076313 Plekhg3Q4VAC9 1341 aa13.11□□□□□ -0.31
Prpf40a-201ENSMUST00000076313 Gm38655A0A286YDK6 273 aa13.1□□□□□ -0.31
Prpf40a-201ENSMUST00000076313 Anp32aO35381 247 aa13.08□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 DiexfQ8BTT6 772 aaKnown RBP13.07□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 Mapk8ip2Q9ERE9 830 aa13.07□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 Lmod2Q3UHZ5 550 aa13.06□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 Zbtb7cQ8VCZ7 619 aa13.05□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 Csrnp3P59055 597 aa13.04□□□□□ -0.32
Prpf40a-201ENSMUST00000076313 DaxxO35613 739 aa13.02□□□□□ -0.33
Prpf40a-201ENSMUST00000076313 Sall2Q9QX96 1004 aa13□□□□□ -0.33
Prpf40a-201ENSMUST00000076313 Anks4bQ8K3X6 423 aa12.96□□□□□ -0.33
Prpf40a-201ENSMUST00000076313 Eid3Q3V124 375 aa12.96□□□□□ -0.33
Prpf40a-201ENSMUST00000076313 Zbtb4Q5F293 982 aa12.95□□□□□ -0.34
Prpf40a-201ENSMUST00000076313 Ifnlr1Q8CGK5 535 aa12.93□□□□□ -0.34
Prpf40a-201ENSMUST00000076313 Npm1Q61937 292 aaKnown RBP12.91□□□□□ -0.34
Prpf40a-201ENSMUST00000076313 Hnrnpul2Q00PI9 745 aaKnown RBP12.9□□□□□ -0.34
Prpf40a-201ENSMUST00000076313 Dcaf1Q80TR8 1506 aa12.87□□□□□ -0.35
Prpf40a-201ENSMUST00000076313 Chic1Q8CBW7 227 aa12.85□□□□□ -0.35
Prpf40a-201ENSMUST00000076313 ArxO35085 564 aa12.84□□□□□ -0.35
Prpf40a-201ENSMUST00000076313 Aplp2Q06335 707 aa12.84□□□□□ -0.35
Prpf40a-201ENSMUST00000076313 Nlrp6Q91WS2 869 aa12.82□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Polr3glQ8R0C0 218 aa12.82□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Prdm10Q3UTQ7 1184 aa12.81□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Abcc8B2RUS7 1588 aa12.81□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Ppp4r2Q0VGB7 417 aa12.79□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Clip1Q922J3 1391 aa12.78□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Calr4Q3TQS0 420 aa12.78□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Erich6D3Z6S9 713 aa12.78□□□□□ -0.36
Prpf40a-201ENSMUST00000076313 Fkbp15Q6P9Q6 1216 aaKnown RBP12.76□□□□□ -0.37
Prpf40a-201ENSMUST00000076313 Cep164Q5DU05 1446 aa12.75□□□□□ -0.37
Prpf40a-201ENSMUST00000076313 Gm13697A2AK42 830 aa12.7□□□□□ -0.38
Prpf40a-201ENSMUST00000076313 Atp1b4Q99ME6 356 aa12.7□□□□□ -0.38
Prpf40a-201ENSMUST00000076313 Brd4Q9ESU6 1400 aaKnown RBP12.65□□□□□ -0.38
Prpf40a-201ENSMUST00000076313 Wdr43Q6ZQL4 677 aaKnown RBP12.64□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Plppr3Q7TPB0 716 aa12.64□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Rad21Q61550 635 aaKnown RBP12.63□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Rangap1P46061 589 aaKnown RBP12.63□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Ccer2J3QPU5 274 aa12.61□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Mrs2Q5NCE8 434 aa12.6□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 1700123L14RikQ3V2K7 440 aa12.6□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Chic2Q9D9G3 165 aa12.59□□□□□ -0.39
Prpf40a-201ENSMUST00000076313 Aebp2Q9Z248 504 aaKnown RBP12.56□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 Fam71e1A1L3C1 212 aa12.55□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 Upf2A2AT37 1269 aaKnown RBP12.55□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 Hsp90aa1P07901 733 aaKnown RBP12.55□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 Ubl4bQ9CQ84 188 aa12.55□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 Rb1cc1Q9ESK9 1588 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 129.7 ms