RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 EzrP26040 586 aaKnown RBP18.54■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Plekhh1Q80TI1 1356 aa18.54■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Rsph4aQ8BYM7 716 aa18.54■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Kif3aP28741 701 aa18.53■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Sox12Q04890 314 aa18.53■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Bicd2Q921C5 820 aa18.53■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Cplx2P84086 134 aa18.52■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Phactr2B1AVP0 632 aa18.52■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Triml2E9PW10 424 aa18.52■□□□□ 0.56
Col2a1-201ENSMUST00000023123 Ftsj3Q9DBE9 838 aaKnown RBP18.52■□□□□ 0.56
Col2a1-201ENSMUST00000023123 PnisrA2AJT4 805 aaKnown RBP18.52■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Polr3gQ6NXY9 223 aa18.51■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Smc3Q9CW03 1217 aaKnown RBP18.51■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Ipo7Q9EPL8 1038 aaKnown RBP18.51■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Washc2Q6PGL7 1334 aa18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Pank1Q8K4K6 548 aa18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Q9D2X8 372 aa18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Gabpb2P81069 414 aa18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 IbspQ61711 324 aa18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Isy1Q69ZQ2 285 aaKnown RBP18.5■□□□□ 0.55
Col2a1-201ENSMUST00000023123 HdgfP51859 237 aaKnown RBP18.49■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Rnf20Q5DTM8 973 aa18.49■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Cc2d1aQ8K1A6 943 aa18.49■□□□□ 0.55
Col2a1-201ENSMUST00000023123 A0A1L1SQF0 893 aa18.49■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Gm21969J3QJZ1 289 aa18.49■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Slc4a2P13808 1237 aaKnown RBP18.48■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Evc2Q8K1G2 1220 aa18.48■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Drc7Q6V3W6 876 aa18.48■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Dixdc1Q80Y83 711 aa18.48■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Ppp1r18Q8BQ30 594 aa18.48■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Ppp2r3aB2RXC8 1150 aa18.47■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Phf14Q9D4H9 881 aa18.47■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Rab11fip3Q8CHD8 1047 aa18.47■□□□□ 0.55
Col2a1-201ENSMUST00000023123 NaspQ99MD9 773 aaKnown RBP18.47■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Ipo4Q8VI75 1082 aa18.46■□□□□ 0.55
Col2a1-201ENSMUST00000023123 Tceal9Q9DD24 104 aa18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Ddx11Q6AXC6 880 aa18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Gnai1B2RSH2 354 aa18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 1700010I14RikQ7TPG0 532 aa18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Tnpo1Q8BFY9 898 aaKnown RBP18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Gnai3Q9DC51 354 aa18.45■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Anp32eP97822 260 aaKnown RBP18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 PogkQ80TC5 607 aa18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Nek4Q9Z1J2 792 aa18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Vps8Q0P5W1 1427 aa18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Ric3Q8BPM6 367 aa18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Rec8Q8C5S7 591 aa18.44■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Smc4Q8CG47 1286 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Mcm2P97310 904 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 SkilQ60665 675 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Tpm4Q6IRU2 248 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Rnf214Q8BFU3 668 aaKnown RBP18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Cchcr1Q8K2I2 770 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Gtf2a1Q99PM3 378 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 BccipQ9CWI3 316 aa18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Znhit6Q3UFB2 460 aaKnown RBP18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Zrsr2Q62377 462 aaKnown RBP18.43■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Pnmal2G3X9N3 661 aa18.42■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Zfp444Q3TDV8 331 aaKnown RBP18.42■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Ap3b2Q9JME5 1082 aa18.41■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Cplx1P63040 134 aa18.41■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Cabp4Q8VHC5 271 aa18.41■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Hook1Q8BIL5 728 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Gpatch3Q8BIY1 525 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Ubxn4Q8VCH8 506 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 PhaxQ9JJT9 385 aaKnown RBP18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Samd1D3YXK1 519 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Usp16Q99LG0 825 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 AppP12023 770 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Swt1Q9DBQ9 907 aa18.4■□□□□ 0.54
Col2a1-201ENSMUST00000023123 Rbm25B2RY56 838 aaKnown RBP18.39■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Erc2Q6PH08 957 aa18.39■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Fez1Q8K0X8 392 aa18.39■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Mad1l1Q9WTX8 717 aaKnown RBP18.38■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Ints3Q7TPD0 1041 aaKnown RBP18.37■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Krt82Q99M74 516 aa18.37■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Ccdc171E9Q1U1 1324 aa18.37■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Q7TT23 1179 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Zkscan1Q8BGS3 561 aaKnown RBP18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 PdcQ9QW08 244 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Cux1P53564 1515 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Shq1Q7TMX5 569 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Cyp46a1Q9WVK8 500 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Mink1Q9JM52 1308 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Cdkn1cP49919 348 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Fam13bQ8K2H3 851 aa18.36■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Hmox1P14901 289 aa18.35■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Gcom1E9PZ54 550 aa18.35■□□□□ 0.53
Col2a1-201ENSMUST00000023123 MyzapQ3UIJ9 466 aa18.35■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Dusp9Q7TNL7 452 aa18.35■□□□□ 0.53
Col2a1-201ENSMUST00000023123 WrnO09053 1401 aa18.34■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Chmp4cQ9D7F7 232 aa18.34■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Nsd2Q8BVE8 1365 aa18.33■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Mns1Q61884 491 aa18.33■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Kri1Q8VDQ9 704 aaKnown RBP18.33■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Cwc15Q9JHS9 229 aaKnown RBP18.33■□□□□ 0.53
Col2a1-201ENSMUST00000023123 Cc2d2bA0A286YDU8 1405 aa18.33■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Tdrd9Q14BI7 1383 aa18.33■□□□□ 0.52
Col2a1-201ENSMUST00000023123 ErbinQ80TH2 1402 aa18.33■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Nectin2P32507 530 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms