RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 PnisrA2AJT4 805 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Gnai1B2RSH2 354 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Gsdma3Q5Y4Y6 464 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Rufy1Q8BIJ7 712 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Plin1Q8CGN5 517 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Gnai3Q9DC51 354 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Arid3cA6PWV5 409 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 CalrP14211 416 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Anp32eP97822 260 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Cwc15Q9JHS9 229 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Sart1Q9Z315 806 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Pank3Q8R2W9 370 aa11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Utp3Q9JI13 469 aaKnown RBP11.11□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Gpatch3Q8BIY1 525 aa11.1□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Smc3Q9CW03 1217 aaKnown RBP11.1□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Gnl3lQ6PGG6 577 aaKnown RBP11.1□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Nsd2Q8BVE8 1365 aa11.1□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Bicd2Q921C5 820 aa11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Fan1Q69ZT1 1020 aa11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Smc2Q8CG48 1191 aaKnown RBP11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Vps53Q8CCB4 832 aa11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Psma5Q9Z2U1 241 aaKnown RBP11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 PdcQ9QW08 244 aa11.09□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Pip4k2aO70172 405 aa11.08□□□□□ -0.63
Ccdc47-201ENSMUST00000002043 Ccdc88bQ4QRL3 1481 aa11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Prkrip1Q9CWV6 186 aaKnown RBP11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ankrd36D3Z4K0 1415 aa11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Usp47Q8BY87 1376 aa11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 OptnQ8K3K8 584 aa11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Chmp7Q8R1T1 451 aa11.08□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Cfap99A0A140LIX9 648 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 1700010I14RikQ7TPG0 532 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Pdcl3Q8BVF2 240 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Cabp4Q8VHC5 271 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 NexnQ7TPW1 607 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ccdc171E9Q1U1 1324 aa11.07□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Zscan10Q3URR7 782 aa11.06□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 FanciQ8K368 1330 aa11.06□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ints3Q7TPD0 1041 aaKnown RBP11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Mns1Q61884 491 aa11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 HmmrQ00547 794 aaKnown RBP11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 CrcpO35427 148 aa11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 AppP12023 770 aa11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ccdc43Q9CR29 222 aaKnown RBP11.05□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Phldb1Q6PDH0 1371 aaKnown RBP11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Sox12Q04890 314 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Usp40Q8BWR4 1235 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Kdm5dQ62240 1548 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 ChgaP26339 463 aaKnown RBP11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ak7Q9D2H2 614 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Cux2P70298 1426 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Luc7lQ9CYI4 371 aaKnown RBP11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Swt1Q9DBQ9 907 aa11.04□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Pak3Q61036 559 aa11.03□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Q8BT18 775 aa11.03□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Prdm16A2A935 1275 aa11.03□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 March6Q6ZQ89 909 aa11.03□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 Ercc6lQ8BHK9 1240 aa11.02□□□□□ -0.64
Ccdc47-201ENSMUST00000002043 AnlnQ8K298 1121 aaKnown RBP11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Inpp5dQ9ES52 1191 aa11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Pibf1E9Q6K3 756 aa11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Zkscan2G3X952 960 aa11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Q8C5K5 320 aa11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 BccipQ9CWI3 316 aa11.02□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Plekhh1Q80TI1 1356 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Cdkn1cP49919 348 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 TxlnbQ8VBT1 685 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Ppp4r3bQ922R5 820 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Dapk1Q80YE7 1442 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Ncoa2Q61026 1462 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Nop14Q8R3N1 860 aaKnown RBP11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Tomm22Q9CPQ3 142 aa11.01□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Nat10Q8K224 1024 aaKnown RBP11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Fez1Q8K0X8 392 aa11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Q9D2X8 372 aa11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 ErbinQ80TH2 1402 aa11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Nolc1E9Q5C9 702 aaKnown RBP11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Dhx16G3X8X0 1044 aaKnown RBP11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Plcd4Q8K3R3 807 aa11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Dhx29Q6PGC1 1365 aaKnown RBP11□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Tmco3Q8BH01 678 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Ric3Q8BPM6 367 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 SkilQ60665 675 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Drc7Q6V3W6 876 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Kiaa0753Q6A000 959 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Ccdc30Q8BVF4 654 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Rrp9Q91WM3 475 aaKnown RBP10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Gcc1Q9D4H2 778 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Dixdc1Q80Y83 711 aa10.99□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 PrkcshO08795 521 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Rfx1P48377 963 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Ccp110Q7TSH4 1004 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Triml2E9PW10 424 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Gsto1O09131 240 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 PsapQ61207 557 aaKnown RBP10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Erlin2Q8BFZ9 340 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 CftrP26361 1476 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Phldb2Q8K1N2 1249 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Odf2lQ9D478 642 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 LrpprcQ6PB66 1392 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms