RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C MNS1P32906 549 aa2.94□□□□□ -1.94
RPA135YPR010C RRP4P38792 359 aaKnown RBP2.94□□□□□ -1.94
RPA135YPR010C SMB1P40018 196 aaKnown RBP2.94□□□□□ -1.94
RPA135YPR010C SNX4P47057 423 aa2.94□□□□□ -1.94
RPA135YPR010C SCW4P53334 386 aaKnown RBP2.94□□□□□ -1.94
RPA135YPR010C WSC2P53832 503 aa2.94□□□□□ -1.94
RPA135YPR010C VAM3Q12241 283 aa2.94□□□□□ -1.94
RPA135YPR010C YDL180WQ12301 547 aa2.94□□□□□ -1.94
RPA135YPR010C FRE7Q12333 620 aa2.94□□□□□ -1.94
RPA135YPR010C YOS1Q3E834 85 aa2.94□□□□□ -1.94
RPA135YPR010C DFR1P07807 211 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
RPA135YPR010C MRS4P23500 304 aa2.94□□□□□ -1.94
RPA135YPR010C APL3P38065 1025 aa2.94□□□□□ -1.94
RPA135YPR010C OSH7P38755 437 aa2.94□□□□□ -1.94
RPA135YPR010C EMC5P40540 141 aa2.94□□□□□ -1.94
RPA135YPR010C PGU1P47180 361 aa2.94□□□□□ -1.94
RPA135YPR010C YOR192C-CQ3E736 78 aa2.94□□□□□ -1.94
RPA135YPR010C CMC2Q3E7A4 109 aa2.94□□□□□ -1.94
RPA135YPR010C SPO13P23624 291 aa2.93□□□□□ -1.94
RPA135YPR010C LAG1P38703 411 aa2.93□□□□□ -1.94
RPA135YPR010C YGL159WP53110 370 aa2.93□□□□□ -1.94
RPA135YPR010C ADD37Q03233 198 aa2.93□□□□□ -1.94
RPA135YPR010C CAC2Q04199 468 aa2.93□□□□□ -1.94
RPA135YPR010C ORM2Q06144 216 aa2.93□□□□□ -1.94
RPA135YPR010C BER1Q06688 274 aaKnown RBP2.93□□□□□ -1.94
RPA135YPR010C PAA1Q12447 191 aaKnown RBP2.93□□□□□ -1.94
RPA135YPR010C UBA3Q99344 299 aa2.93□□□□□ -1.94
RPA135YPR010C EHD3P28817 500 aa2.93□□□□□ -1.94
RPA135YPR010C RPD3P32561 433 aa2.93□□□□□ -1.94
RPA135YPR010C CMC1P36064 111 aa2.93□□□□□ -1.94
RPA135YPR010C BMT5P40493 336 aa2.93□□□□□ -1.94
RPA135YPR010C CTK2P46962 323 aa2.93□□□□□ -1.94
RPA135YPR010C YGL204CP53089 101 aa2.93□□□□□ -1.94
RPA135YPR010C CRR1Q05790 422 aa2.93□□□□□ -1.94
RPA135YPR010C RAF1Q06891 181 aa2.93□□□□□ -1.94
RPA135YPR010C FIT3Q08907 204 aa2.93□□□□□ -1.94
RPA135YPR010C RFM1Q12192 310 aa2.93□□□□□ -1.94
RPA135YPR010C FOL3Q12676 427 aaPredicted RBP2.93□□□□□ -1.94
RPA135YPR010C PCC1Q3E833 88 aa2.93□□□□□ -1.94
RPA135YPR010C YLR302CO13544 120 aa2.93□□□□□ -1.94
RPA135YPR010C CKS1P20486 150 aaKnown RBP2.93□□□□□ -1.94
RPA135YPR010C SRB6P32570 121 aa2.93□□□□□ -1.94
RPA135YPR010C YKR073CP36153 106 aa2.93□□□□□ -1.94
RPA135YPR010C YJR056CP47115 236 aa2.93□□□□□ -1.94
RPA135YPR010C DLT1Q04216 342 aa2.93□□□□□ -1.94
RPA135YPR010C YMR090WQ04304 227 aaKnown RBP2.93□□□□□ -1.94
RPA135YPR010C GTO3Q04806 366 aa2.93□□□□□ -1.94
RPA135YPR010C GAS2Q06135 555 aa2.93□□□□□ -1.94
RPA135YPR010C HNT3Q08702 217 aa2.93□□□□□ -1.94
RPA135YPR010C SCP1Q08873 200 aa2.93□□□□□ -1.94
RPA135YPR010C SME1Q12330 94 aaPredicted RBP2.93□□□□□ -1.94
RPA135YPR010C MED4Q12343 284 aa2.93□□□□□ -1.94
RPA135YPR010C DGK1Q12382 290 aa2.93□□□□□ -1.94
RPA135YPR010C ATG40Q99325 256 aa2.93□□□□□ -1.94
RPA135YPR010C CSF1Q12150 2958 aa2.93□□□□□ -1.94
RPA135YPR010C COX1P00401 534 aa2.92□□□□□ -1.94
RPA135YPR010C SCEIP03882 235 aa2.92□□□□□ -1.94
RPA135YPR010C RFA3P26755 122 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C COQ2P32378 372 aa2.92□□□□□ -1.94
RPA135YPR010C MSS1P32559 526 aaPredicted RBP2.92□□□□□ -1.94
RPA135YPR010C PTI1P39927 425 aaPredicted RBP2.92□□□□□ -1.94
RPA135YPR010C YIL029CP40538 142 aa2.92□□□□□ -1.94
RPA135YPR010C PHO23P50947 330 aa2.92□□□□□ -1.94
RPA135YPR010C RIM9Q04734 239 aa2.92□□□□□ -1.94
RPA135YPR010C TFC7Q12415 435 aa2.92□□□□□ -1.94
RPA135YPR010C YCR101CP25607 182 aa2.92□□□□□ -1.94
RPA135YPR010C TRR1P29509 319 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C GCV3P39726 170 aaPredicted RBP2.92□□□□□ -1.94
RPA135YPR010C MOB2P43563 287 aa2.92□□□□□ -1.94
RPA135YPR010C YGL235WP53071 178 aa2.92□□□□□ -1.94
RPA135YPR010C CGR1P53188 120 aa2.92□□□□□ -1.94
RPA135YPR010C ATG4P53867 494 aa2.92□□□□□ -1.94
RPA135YPR010C YDR209CQ03480 137 aa2.92□□□□□ -1.94
RPA135YPR010C YPR098CQ06089 161 aa2.92□□□□□ -1.94
RPA135YPR010C YOR029WQ12243 111 aa2.92□□□□□ -1.94
RPA135YPR010C AGC1Q12482 902 aa2.92□□□□□ -1.94
RPA135YPR010C YIL046W-AQ3E7Z4 54 aa2.92□□□□□ -1.94
RPA135YPR010C YML003WP0CF16 290 aa2.92□□□□□ -1.94
RPA135YPR010C FRS1P15624 595 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C RFA1P22336 621 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C STP22P25604 385 aa2.92□□□□□ -1.94
RPA135YPR010C DEG1P31115 442 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C PET100P38958 111 aa2.92□□□□□ -1.94
RPA135YPR010C YJL118WP47022 219 aa2.92□□□□□ -1.94
RPA135YPR010C PRY1P47032 299 aa2.92□□□□□ -1.94
RPA135YPR010C MTL1P53214 551 aa2.92□□□□□ -1.94
RPA135YPR010C ACT1P60010 375 aaKnown RBP2.92□□□□□ -1.94
RPA135YPR010C RCE1Q03530 315 aa2.92□□□□□ -1.94
RPA135YPR010C YML108WQ03759 105 aa2.92□□□□□ -1.94
RPA135YPR010C ATC1Q04005 294 aa2.92□□□□□ -1.94
RPA135YPR010C RRG8Q06109 277 aa2.92□□□□□ -1.94
RPA135YPR010C ANT1Q06497 328 aa2.92□□□□□ -1.94
RPA135YPR010C NDE2Q07500 545 aa2.92□□□□□ -1.94
RPA135YPR010C WSC3Q12215 556 aa2.92□□□□□ -1.94
RPA135YPR010C ATG5Q12380 294 aa2.92□□□□□ -1.94
RPA135YPR010C RPL7AP05737 244 aaKnown RBP2.91□□□□□ -1.94
RPA135YPR010C COX9P07255 59 aa2.91□□□□□ -1.94
RPA135YPR010C ZRC1P20107 442 aa2.91□□□□□ -1.94
RPA135YPR010C SEC22P22214 214 aa2.91□□□□□ -1.94
RPA135YPR010C RAD23P32628 398 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms