RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLP1	YOR250C	GPI15	P53961	229 aa		5	□□□□□ -1.61
CLP1	YOR250C	RHO4	Q00246	291 aa		5	□□□□□ -1.61
CLP1	YOR250C	CGI121	Q03705	181 aa	Known RBP	5	□□□□□ -1.61
CLP1	YOR250C	YDR391C	Q04170	232 aa		5	□□□□□ -1.61
CLP1	YOR250C	SEC13	Q04491	297 aa	Known RBP	5	□□□□□ -1.61
CLP1	YOR250C	CNL1	Q06333	122 aa		5	□□□□□ -1.61
CLP1	YOR250C	ATG10	Q07879	167 aa		5	□□□□□ -1.61
CLP1	YOR250C	RAD28	Q12021	506 aa		5	□□□□□ -1.61
CLP1	YOR250C	CHO1	P08456	276 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	MCK1	P21965	375 aa	Known RBP	4.99	□□□□□ -1.61
CLP1	YOR250C	PET18	P25362	215 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	RFA2	P26754	273 aa	Known RBP	4.99	□□□□□ -1.61
CLP1	YOR250C	ADE1	P27616	306 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	COQ3	P27680	312 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	ARO2	P28777	376 aa	Known RBP	4.99	□□□□□ -1.61
CLP1	YOR250C	ERG3	P32353	365 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	MRPL27	P36526	146 aa	Predicted RBP	4.99	□□□□□ -1.61
CLP1	YOR250C	IML3	P38265	245 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	TRR2	P38816	342 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	PFS1	P38872	237 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	YIL060W	P40519	144 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	SYS1	P41544	203 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	NIT2	P47016	307 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	BOR1	P53838	576 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	EST3	Q03096	181 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	YMR178W	Q03219	274 aa	Known RBP	4.99	□□□□□ -1.61
CLP1	YOR250C	BSP1	Q06604	576 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	YPQ1	Q12010	308 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	POM33	Q12164	279 aa		4.99	□□□□□ -1.61
CLP1	YOR250C	HIP1	P06775	603 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	RPS28B	P0C0X0	67 aa	Known RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	YSR3	P23501	404 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	ADK2	P26364	225 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	PAN3	P36102	679 aa	Predicted RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	SDS24	P38314	527 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	YER121W	P40076	114 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	SPG5	P42933	373 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	SFH5	P47008	294 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	TOS2	P50078	622 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	NIF3	P53081	288 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	FLC3	P53121	802 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	YGR126W	P53274	230 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	ACT1	P60010	375 aa	Known RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	NAT4	Q04751	285 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	SNT309	Q06091	175 aa	Predicted RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	TAZ1	Q06510	381 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	RDR1	Q08904	546 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	YDL211C	Q12121	372 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	PRS5	Q12265	496 aa	Known RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	TPT1	Q12272	230 aa	Known RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	YPR064W	Q12492	139 aa		4.98	□□□□□ -1.61
CLP1	YOR250C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.98	□□□□□ -1.61
CLP1	YOR250C	RPL9A	P05738	191 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	YBR121C-A	P0C5L4	52 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	CPR1	P14832	162 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	EHD3	P28817	500 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	TRR1	P29509	319 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	GCS1	P35197	352 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YBR013C	P38215	129 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	SPC25	P40014	221 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	GAT2	P40209	560 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	AVT7	P40501	490 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	PAU15	P40585	124 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	BUD8	P41698	603 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	CIN2	P46670	268 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	TAX4	P47030	604 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	IKS1	P47042	667 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	RPL9B	P51401	191 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	YGL235W	P53071	178 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	EMC4	P53073	190 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	SKO1	Q02100	647 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	STD1	Q02794	444 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	RSM10	Q03201	203 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	MTQ2	Q03920	221 aa	Predicted RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	CUE4	Q04201	117 aa	Predicted RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	BSC6	Q08280	497 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	FOL3	Q12676	427 aa	Predicted RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	RPS21B	Q3E754	87 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	DET1	Q99288	334 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	TPI1	P00942	248 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	YFL068W	P0CX99	160 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YLL066W-A	P0CY00	160 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YLL067W-A	P0CY01	160 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YCR023C	P25351	611 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	MET30	P39014	640 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	HEM14	P40012	539 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YJR012C	P47087	207 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YGL185C	P53100	379 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	CDH1	P53197	566 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YGR250C	P53316	781 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	BUD25	P85052	153 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	TIM10	P87108	93 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	ELC1	Q03071	99 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	SNO4	Q04902	237 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	HSP33	Q08914	237 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	HSP32	Q08992	237 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	FSF1	Q12029	327 aa	Known RBP	4.97	□□□□□ -1.61
CLP1	YOR250C	COX19	Q3E731	98 aa		4.97	□□□□□ -1.61
CLP1	YOR250C	YLR422W	Q06409	1932 aa		4.96	□□□□□ -1.61
CLP1	YOR250C	ATP10	P18496	279 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms