RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	VPS28	Q02767	242 aa		10.22	□□□□□ -0.77
TIR4	YOR009W	ASM4	Q05166	528 aa		10.22	□□□□□ -0.77
TIR4	YOR009W	ALG6	Q12001	544 aa	Known RBP	10.22	□□□□□ -0.77
TIR4	YOR009W	SWT1	Q12104	458 aa		10.22	□□□□□ -0.77
TIR4	YOR009W	MRS4	P23500	304 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	SPC29	P33419	253 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	SNX4	P47057	423 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	HSK3	P69852	69 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	RIM9	Q04734	239 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	ANT1	Q06497	328 aa		10.21	□□□□□ -0.78
TIR4	YOR009W	NOC4	Q06512	552 aa	Predicted RBP	10.21	□□□□□ -0.78
TIR4	YOR009W	PDC2	P32896	925 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	YUH1	P35127	236 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	BNA2	P47125	453 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	MEH1	Q02205	184 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	DPB4	Q04603	196 aa	Known RBP	10.2	□□□□□ -0.78
TIR4	YOR009W	YOR292C	Q08743	309 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	YOR029W	Q12243	111 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	ATG31	Q12421	196 aa		10.2	□□□□□ -0.78
TIR4	YOR009W	YKL187C	P34231	750 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	SRY1	P36007	326 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	SLM1	P40485	686 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	QRI1	P43123	477 aa	Known RBP	10.19	□□□□□ -0.78
TIR4	YOR009W	PEF1	P53238	335 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	ACT1	P60010	375 aa	Known RBP	10.19	□□□□□ -0.78
TIR4	YOR009W	LIP2	Q06005	328 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	RFM1	Q12192	310 aa		10.19	□□□□□ -0.78
TIR4	YOR009W	GLR1	P41921	483 aa	Known RBP	10.18	□□□□□ -0.78
TIR4	YOR009W	PNC1	P53184	216 aa	Known RBP	10.18	□□□□□ -0.78
TIR4	YOR009W	RPL43A	P0CX25	92 aa	Known RBP	10.17	□□□□□ -0.78
TIR4	YOR009W	RPL43B	P0CX26	92 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	EMP24	P32803	203 aa	Known RBP	10.17	□□□□□ -0.78
TIR4	YOR009W	CTR2	P38865	189 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	YNL046W	P53956	172 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	EST3	Q03096	181 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	AEP3	Q12089	606 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	YLR146W-A	Q2V2P1	62 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	YER121W	P40076	114 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	GAT2	P40209	560 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	YGL117W	P53133	265 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	CWC25	P53854	179 aa	Known RBP	10.17	□□□□□ -0.78
TIR4	YOR009W	SNA4	Q07549	140 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	YMR105W-A	Q8TGS8	64 aa		10.17	□□□□□ -0.78
TIR4	YOR009W	ERV15	P38312	142 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	SSO2	P39926	295 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	PCL7	P40186	285 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	RFC2	P40348	353 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	PIR5	P46999	287 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	XPT1	P47165	209 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	YGL262W	P53054	175 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	TEX1	P53851	422 aa	Known RBP	10.16	□□□□□ -0.78
TIR4	YOR009W	GMC1	Q04399	608 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	DGK1	Q12382	290 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	ISN1	Q99312	450 aa		10.16	□□□□□ -0.78
TIR4	YOR009W	CUE1	P38428	203 aa		10.15	□□□□□ -0.78
TIR4	YOR009W	OSH7	P38755	437 aa		10.15	□□□□□ -0.78
TIR4	YOR009W	YJR012C	P47087	207 aa		10.15	□□□□□ -0.78
TIR4	YOR009W	DID2	P69771	204 aa		10.15	□□□□□ -0.78
TIR4	YOR009W	RPL21A	Q02753	160 aa	Known RBP	10.15	□□□□□ -0.78
TIR4	YOR009W	YDR415C	Q04033	374 aa	Predicted RBP	10.15	□□□□□ -0.78
TIR4	YOR009W	ATP14	Q12349	124 aa		10.15	□□□□□ -0.78
TIR4	YOR009W	RPL21B	Q12672	160 aa	Known RBP	10.15	□□□□□ -0.78
TIR4	YOR009W	GCV3	P39726	170 aa	Predicted RBP	10.14	□□□□□ -0.79
TIR4	YOR009W	PKP2	P53170	491 aa		10.14	□□□□□ -0.79
TIR4	YOR009W	GPI15	P53961	229 aa		10.14	□□□□□ -0.79
TIR4	YOR009W	ERP1	Q05359	219 aa	Known RBP	10.14	□□□□□ -0.79
TIR4	YOR009W	REC104	P33323	182 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	CPR5	P35176	225 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	YEA6	P39953	335 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	RPL13B	P40212	199 aa	Known RBP	10.13	□□□□□ -0.79
TIR4	YOR009W	AGX1	P43567	385 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	YIF1	P53845	314 aa	Known RBP	10.13	□□□□□ -0.79
TIR4	YOR009W	BER1	Q06688	274 aa	Known RBP	10.13	□□□□□ -0.79
TIR4	YOR009W	YFH1	Q07540	174 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	YOL029C	Q08187	201 aa		10.13	□□□□□ -0.79
TIR4	YOR009W	RPL13A	Q12690	199 aa	Predicted RBP	10.13	□□□□□ -0.79
TIR4	YOR009W	YBR085C-A	O43137	85 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	DBP2	P24783	546 aa	Known RBP	10.12	□□□□□ -0.79
TIR4	YOR009W	IKI1	P38874	309 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	ASP1	P38986	381 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR4	YOR009W	MSO1	P53604	210 aa	Known RBP	10.12	□□□□□ -0.79
TIR4	YOR009W	WSC2	P53832	503 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	INN1	P53901	409 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	TMC1	Q08422	150 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR4	YOR009W	ATG5	Q12380	294 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	YBR255C-A	Q3E776	120 aa		10.12	□□□□□ -0.79
TIR4	YOR009W	COQ2	P32378	372 aa		10.11	□□□□□ -0.79
TIR4	YOR009W	LSM12	P38828	187 aa	Known RBP	10.11	□□□□□ -0.79
TIR4	YOR009W	AIR1	P40507	360 aa	Known RBP	10.11	□□□□□ -0.79
TIR4	YOR009W	UBC12	P52491	188 aa		10.11	□□□□□ -0.79
TIR4	YOR009W	PML1	Q07930	204 aa	Predicted RBP	10.11	□□□□□ -0.79
TIR4	YOR009W	YCL048W-A	Q2V2Q2	79 aa		10.11	□□□□□ -0.79
TIR4	YOR009W	BOL1	Q3E793	110 aa		10.11	□□□□□ -0.79
TIR4	YOR009W	COA2	Q3E823	68 aa		10.11	□□□□□ -0.79
TIR4	YOR009W	LSB5	P25369	354 aa		10.1	□□□□□ -0.79
TIR4	YOR009W	RPD3	P32561	433 aa		10.1	□□□□□ -0.79
TIR4	YOR009W	YFL015C	P43578	164 aa		10.1	□□□□□ -0.79
TIR4	YOR009W	GEP7	P53171	287 aa		10.1	□□□□□ -0.79
TIR4	YOR009W	ROX3	P25046	220 aa		10.1	□□□□□ -0.79
TIR4	YOR009W	GAR1	P28007	205 aa	Known RBP	10.1	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms