RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YCL048W-AQ2V2Q2 79 aa12.14□□□□□ -0.47
SHR5YOL110W YPC1P38298 316 aa12.13□□□□□ -0.47
SHR5YOL110W SMM1P53720 384 aaKnown RBP12.13□□□□□ -0.47
SHR5YOL110W RPL21AQ02753 160 aaKnown RBP12.13□□□□□ -0.47
SHR5YOL110W FEX1Q08913 375 aa12.13□□□□□ -0.47
SHR5YOL110W SWT1Q12104 458 aa12.13□□□□□ -0.47
SHR5YOL110W RPL21BQ12672 160 aaKnown RBP12.13□□□□□ -0.47
SHR5YOL110W YMR105W-AQ8TGS8 64 aa12.13□□□□□ -0.47
SHR5YOL110W CKS1P20486 150 aaKnown RBP12.12□□□□□ -0.47
SHR5YOL110W ISC10P32645 267 aa12.12□□□□□ -0.47
SHR5YOL110W YIL012WP40551 113 aa12.12□□□□□ -0.47
SHR5YOL110W MRPL22P53881 309 aa12.12□□□□□ -0.47
SHR5YOL110W PRP11Q07350 266 aaPredicted RBP12.12□□□□□ -0.47
SHR5YOL110W YOR292CQ08743 309 aa12.12□□□□□ -0.47
SHR5YOL110W GDH1P07262 454 aaKnown RBP12.11□□□□□ -0.47
SHR5YOL110W SSO2P39926 295 aa12.11□□□□□ -0.47
SHR5YOL110W YLR224WQ05947 369 aa12.11□□□□□ -0.47
SHR5YOL110W YOL029CQ08187 201 aa12.11□□□□□ -0.47
SHR5YOL110W YCT1Q12235 531 aa12.11□□□□□ -0.47
SHR5YOL110W YOR029WQ12243 111 aa12.11□□□□□ -0.47
SHR5YOL110W RTR2Q12378 196 aa12.11□□□□□ -0.47
SHR5YOL110W HUG1Q6Q5K6 68 aa12.11□□□□□ -0.47
SHR5YOL110W APA2P22108 325 aa12.1□□□□□ -0.47
SHR5YOL110W MRP20P32387 263 aa12.1□□□□□ -0.47
SHR5YOL110W TCA17P32613 152 aa12.1□□□□□ -0.47
SHR5YOL110W CPR5P35176 225 aa12.1□□□□□ -0.47
SHR5YOL110W VMA22P38784 181 aa12.1□□□□□ -0.47
SHR5YOL110W PCL7P40186 285 aa12.1□□□□□ -0.47
SHR5YOL110W SWM2P40342 146 aa12.1□□□□□ -0.47
SHR5YOL110W YIR035CP40579 254 aa12.1□□□□□ -0.47
SHR5YOL110W NCA3P46955 337 aa12.1□□□□□ -0.47
SHR5YOL110W ECM27P47144 725 aa12.1□□□□□ -0.47
SHR5YOL110W TTI2P47168 421 aa12.1□□□□□ -0.47
SHR5YOL110W PLP1Q04004 230 aa12.1□□□□□ -0.47
SHR5YOL110W IRC25Q07951 179 aa12.1□□□□□ -0.47
SHR5YOL110W YDL009CQ12210 107 aa12.1□□□□□ -0.47
SHR5YOL110W STF2P16965 84 aa12.09□□□□□ -0.47
SHR5YOL110W ATP10P18496 279 aa12.09□□□□□ -0.47
SHR5YOL110W INN1P53901 409 aa12.09□□□□□ -0.47
SHR5YOL110W ASM4Q05166 528 aa12.09□□□□□ -0.47
SHR5YOL110W YDL086WQ07505 273 aa12.09□□□□□ -0.47
SHR5YOL110W YFH1Q07540 174 aa12.09□□□□□ -0.47
SHR5YOL110W ALG6Q12001 544 aaKnown RBP12.09□□□□□ -0.47
SHR5YOL110W BPH1P25356 2167 aa12.08□□□□□ -0.48
SHR5YOL110W LSB5P25369 354 aa12.08□□□□□ -0.48
SHR5YOL110W ERG2P32352 222 aa12.08□□□□□ -0.48
SHR5YOL110W GPI18P38211 433 aa12.08□□□□□ -0.48
SHR5YOL110W YGL262WP53054 175 aa12.08□□□□□ -0.48
SHR5YOL110W YNG1Q08465 219 aa12.08□□□□□ -0.48
SHR5YOL110W TFC7Q12415 435 aa12.08□□□□□ -0.48
SHR5YOL110W Q0297Q9ZZV8 51 aa12.08□□□□□ -0.48
SHR5YOL110W YCR061WP25639 631 aa12.07□□□□□ -0.48
SHR5YOL110W SOR1P35497 357 aaKnown RBP12.07□□□□□ -0.48
SHR5YOL110W IKI1P38874 309 aa12.07□□□□□ -0.48
SHR5YOL110W YIR020CP40575 100 aa12.07□□□□□ -0.48
SHR5YOL110W YHC3P47040 408 aa12.07□□□□□ -0.48
SHR5YOL110W CWC25P53854 179 aaKnown RBP12.07□□□□□ -0.48
SHR5YOL110W DMA2P53924 522 aa12.07□□□□□ -0.48
SHR5YOL110W SOR2Q07786 357 aa12.07□□□□□ -0.48
SHR5YOL110W MAG1P22134 296 aaKnown RBP12.06□□□□□ -0.48
SHR5YOL110W TIP1P27654 210 aaPredicted RBP12.06□□□□□ -0.48
SHR5YOL110W GAR1P28007 205 aaKnown RBP12.06□□□□□ -0.48
SHR5YOL110W IES6P32617 166 aa12.06□□□□□ -0.48
SHR5YOL110W ERV15P38312 142 aa12.06□□□□□ -0.48
SHR5YOL110W RPL13BP40212 199 aaKnown RBP12.06□□□□□ -0.48
SHR5YOL110W VPS28Q02767 242 aa12.06□□□□□ -0.48
SHR5YOL110W GEP5Q12393 293 aa12.06□□□□□ -0.48
SHR5YOL110W RPL13AQ12690 199 aaPredicted RBP12.06□□□□□ -0.48
SHR5YOL110W COQ2P32378 372 aa12.04□□□□□ -0.48
SHR5YOL110W REC104P33323 182 aa12.04□□□□□ -0.48
SHR5YOL110W WSC2P53832 503 aa12.04□□□□□ -0.48
SHR5YOL110W LPP1Q04396 274 aa12.04□□□□□ -0.48
SHR5YOL110W CSI2Q08054 341 aa12.04□□□□□ -0.48
SHR5YOL110W YGL194C-AQ2V2P6 80 aa12.04□□□□□ -0.48
SHR5YOL110W YJR112W-AQ3E743 109 aa12.04□□□□□ -0.48
SHR5YOL110W GLY1P37303 387 aaKnown RBP12.03□□□□□ -0.48
SHR5YOL110W CUE1P38428 203 aa12.03□□□□□ -0.48
SHR5YOL110W ACT1P60010 375 aaKnown RBP12.03□□□□□ -0.48
SHR5YOL110W RRT7Q07829 113 aa12.03□□□□□ -0.48
SHR5YOL110W RDL1Q12305 139 aaKnown RBP12.03□□□□□ -0.48
SHR5YOL110W PDC2P32896 925 aa12.02□□□□□ -0.49
SHR5YOL110W PHM8P40025 321 aa12.02□□□□□ -0.49
SHR5YOL110W YPD1Q07688 167 aa12.02□□□□□ -0.49
SHR5YOL110W PAM18Q07914 168 aa12.02□□□□□ -0.49
SHR5YOL110W HRD1Q08109 551 aa12.02□□□□□ -0.49
SHR5YOL110W YLR146W-AQ2V2P1 62 aa12.02□□□□□ -0.49
SHR5YOL110W ISN1Q99312 450 aa12.02□□□□□ -0.49
SHR5YOL110W SEC22P22214 214 aa12.01□□□□□ -0.49
SHR5YOL110W GEP4P38812 185 aa12.01□□□□□ -0.49
SHR5YOL110W LSM12P38828 187 aaKnown RBP12.01□□□□□ -0.49
SHR5YOL110W PKP2P53170 491 aa12.01□□□□□ -0.49
SHR5YOL110W JAC1P53193 184 aa12.01□□□□□ -0.49
SHR5YOL110W ROX3P25046 220 aa12□□□□□ -0.49
SHR5YOL110W YJR012CP47087 207 aa12□□□□□ -0.49
SHR5YOL110W ABM1P47146 123 aa12□□□□□ -0.49
SHR5YOL110W YGL114WP53134 725 aa12□□□□□ -0.49
SHR5YOL110W PNC1P53184 216 aaKnown RBP12□□□□□ -0.49
SHR5YOL110W GPI15P53961 229 aa12□□□□□ -0.49
SHR5YOL110W COA4Q05809 96 aa12□□□□□ -0.49
SHR5YOL110W BOL1Q3E793 110 aa12□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms