RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	YPC1	P38298	316 aa		12.91	□□□□□ -0.34
CCC1	YLR220W	LAG1	P38703	411 aa		12.91	□□□□□ -0.34
CCC1	YLR220W	CAB5	Q03941	241 aa		12.91	□□□□□ -0.34
CCC1	YLR220W	DPB4	Q04603	196 aa	Known RBP	12.91	□□□□□ -0.34
CCC1	YLR220W	RIM9	Q04734	239 aa		12.91	□□□□□ -0.34
CCC1	YLR220W	YOR292C	Q08743	309 aa		12.91	□□□□□ -0.34
CCC1	YLR220W	URA2	P07259	2214 aa	Known RBP	12.9	□□□□□ -0.34
CCC1	YLR220W	GCN3	P14741	305 aa		12.9	□□□□□ -0.34
CCC1	YLR220W	SRL3	P36167	246 aa		12.9	□□□□□ -0.34
CCC1	YLR220W	TTI2	P47168	421 aa		12.9	□□□□□ -0.34
CCC1	YLR220W	YDL009C	Q12210	107 aa		12.9	□□□□□ -0.34
CCC1	YLR220W	QCR2	P07257	368 aa		12.89	□□□□□ -0.35
CCC1	YLR220W	SOR1	P35497	357 aa	Known RBP	12.89	□□□□□ -0.35
CCC1	YLR220W	GZF3	P42944	551 aa	Known RBP	12.89	□□□□□ -0.35
CCC1	YLR220W	SOR2	Q07786	357 aa		12.89	□□□□□ -0.35
CCC1	YLR220W	SAR1	P20606	190 aa	Known RBP	12.88	□□□□□ -0.35
CCC1	YLR220W	MRP20	P32387	263 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	RRF1	P38771	230 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	BOL3	P39724	118 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	YHC3	P47040	408 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	BBP1	Q12365	385 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	HUG1	Q6Q5K6	68 aa		12.88	□□□□□ -0.35
CCC1	YLR220W	TCA17	P32613	152 aa		12.87	□□□□□ -0.35
CCC1	YLR220W	UTP30	P36144	274 aa	Known RBP	12.87	□□□□□ -0.35
CCC1	YLR220W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	12.87	□□□□□ -0.35	not detected
CCC1	YLR220W	YFL015C	P43578	164 aa		12.87	□□□□□ -0.35
CCC1	YLR220W	NGL2	Q03264	515 aa	Known RBP	12.87	□□□□□ -0.35
CCC1	YLR220W	ARR2	Q06597	130 aa		12.87	□□□□□ -0.35
CCC1	YLR220W	IRC25	Q07951	179 aa		12.87	□□□□□ -0.35
CCC1	YLR220W	CSI2	Q08054	341 aa		12.87	□□□□□ -0.35
CCC1	YLR220W	GRX2	P17695	143 aa	Known RBP	12.86	□□□□□ -0.35
CCC1	YLR220W	SUA5	P32579	426 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	REC104	P33323	182 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	MIA40	P36046	403 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	COS8	P38723	381 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	YGL262W	P53054	175 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	MEH1	Q02205	184 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	TSA2	Q04120	196 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	SWT1	Q12104	458 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	TFC7	Q12415	435 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	PRM4	Q12498	284 aa		12.86	□□□□□ -0.35
CCC1	YLR220W	SPS18	P32572	300 aa		12.85	□□□□□ -0.35
CCC1	YLR220W	IKI1	P38874	309 aa		12.85	□□□□□ -0.35
CCC1	YLR220W	UBP8	P50102	471 aa		12.85	□□□□□ -0.35
CCC1	YLR220W	IRC24	P40580	263 aa		12.84	□□□□□ -0.35
CCC1	YLR220W	YJL118W	P47022	219 aa		12.84	□□□□□ -0.35
CCC1	YLR220W	YGL114W	P53134	725 aa		12.84	□□□□□ -0.35
CCC1	YLR220W	PRP11	Q07350	266 aa	Predicted RBP	12.84	□□□□□ -0.35
CCC1	YLR220W	YOL029C	Q08187	201 aa		12.84	□□□□□ -0.35
CCC1	YLR220W	CKS1	P20486	150 aa	Known RBP	12.83	□□□□□ -0.36
CCC1	YLR220W	ERG2	P32352	222 aa		12.83	□□□□□ -0.36
CCC1	YLR220W	VMA11	P32842	164 aa		12.83	□□□□□ -0.36
CCC1	YLR220W	ADH5	P38113	351 aa	Known RBP	12.83	□□□□□ -0.36
CCC1	YLR220W	WSC2	P53832	503 aa		12.83	□□□□□ -0.36
CCC1	YLR220W	FEX2	Q08991	375 aa		12.83	□□□□□ -0.36
CCC1	YLR220W	TFB5	Q3E7C1	72 aa	Predicted RBP	12.83	□□□□□ -0.36
CCC1	YLR220W	TPI1	P00942	248 aa	Known RBP	12.82	□□□□□ -0.36
CCC1	YLR220W	LSB5	P25369	354 aa		12.82	□□□□□ -0.36
CCC1	YLR220W	ALG14	P38242	237 aa		12.82	□□□□□ -0.36
CCC1	YLR220W	YGR210C	P42942	411 aa		12.82	□□□□□ -0.36
CCC1	YLR220W	YCT1	Q12235	531 aa		12.82	□□□□□ -0.36
CCC1	YLR220W	OLE1	P21147	510 aa	Known RBP	12.81	□□□□□ -0.36
CCC1	YLR220W	CBT1	P36038	271 aa	Predicted RBP	12.81	□□□□□ -0.36
CCC1	YLR220W	YDR415C	Q04033	374 aa	Predicted RBP	12.81	□□□□□ -0.36
CCC1	YLR220W	ADH6	Q04894	360 aa	Known RBP	12.81	□□□□□ -0.36
CCC1	YLR220W	YLR125W	Q12138	136 aa		12.81	□□□□□ -0.36
CCC1	YLR220W	BOL1	Q3E793	110 aa		12.81	□□□□□ -0.36
CCC1	YLR220W	ACB1	P31787	87 aa		12.8	□□□□□ -0.36
CCC1	YLR220W	SSO2	P39926	295 aa		12.8	□□□□□ -0.36
CCC1	YLR220W	LSM4	P40070	187 aa	Known RBP	12.8	□□□□□ -0.36
CCC1	YLR220W	PCL7	P40186	285 aa		12.8	□□□□□ -0.36
CCC1	YLR220W	CWC25	P53854	179 aa	Known RBP	12.8	□□□□□ -0.36
CCC1	YLR220W	HRD1	Q08109	551 aa		12.8	□□□□□ -0.36
CCC1	YLR220W	STF2	P16965	84 aa		12.79	□□□□□ -0.36
CCC1	YLR220W	YMR31	P19955	123 aa		12.79	□□□□□ -0.36
CCC1	YLR220W	ROX3	P25046	220 aa		12.79	□□□□□ -0.36
CCC1	YLR220W	YMR317W	Q04893	1140 aa		12.79	□□□□□ -0.36
CCC1	YLR220W	CUE1	P38428	203 aa		12.78	□□□□□ -0.36
CCC1	YLR220W	YPD1	Q07688	167 aa		12.78	□□□□□ -0.36
CCC1	YLR220W	FEX1	Q08913	375 aa		12.78	□□□□□ -0.36
CCC1	YLR220W	COQ2	P32378	372 aa		12.77	□□□□□ -0.37
CCC1	YLR220W	RPL13B	P40212	199 aa	Known RBP	12.76	□□□□□ -0.37
CCC1	YLR220W	VPS28	Q02767	242 aa		12.76	□□□□□ -0.37
CCC1	YLR220W	STD1	Q02794	444 aa		12.76	□□□□□ -0.37
CCC1	YLR220W	MIX17	Q03667	156 aa		12.76	□□□□□ -0.37
CCC1	YLR220W	YFH1	Q07540	174 aa		12.76	□□□□□ -0.37
CCC1	YLR220W	RPL13A	Q12690	199 aa	Predicted RBP	12.76	□□□□□ -0.37
CCC1	YLR220W	YER145C-A	A0A023PYF4	145 aa		12.75	□□□□□ -0.37
CCC1	YLR220W	DBP2	P24783	546 aa	Known RBP	12.75	□□□□□ -0.37
CCC1	YLR220W	ERV15	P38312	142 aa		12.75	□□□□□ -0.37
CCC1	YLR220W	YIR035C	P40579	254 aa		12.75	□□□□□ -0.37
CCC1	YLR220W	LPP1	Q04396	274 aa		12.75	□□□□□ -0.37
CCC1	YLR220W	YOR097C	Q12274	175 aa	Predicted RBP	12.75	□□□□□ -0.37
CCC1	YLR220W	YPR071W	Q12346	211 aa		12.75	□□□□□ -0.37
CCC1	YLR220W	RPL15A	P05748	204 aa	Known RBP	12.74	□□□□□ -0.37
CCC1	YLR220W	YJR012C	P47087	207 aa		12.74	□□□□□ -0.37
CCC1	YLR220W	YGR045C	P53229	120 aa		12.74	□□□□□ -0.37
CCC1	YLR220W	RPL15B	P54780	204 aa	Predicted RBP	12.74	□□□□□ -0.37
CCC1	YLR220W	HED1	Q03937	162 aa		12.74	□□□□□ -0.37
CCC1	YLR220W	PAM18	Q07914	168 aa		12.74	□□□□□ -0.37

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms