RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	SWD2	P36104	329 aa	Predicted RBP	5.65	□□□□□ -1.5
MSC3	YLR219W	PCL7	P40186	285 aa		5.65	□□□□□ -1.5
MSC3	YLR219W	YIL012W	P40551	113 aa		5.65	□□□□□ -1.5
MSC3	YLR219W	GMC1	Q04399	608 aa		5.65	□□□□□ -1.5
MSC3	YLR219W	TRM13	Q12383	476 aa		5.65	□□□□□ -1.5
MSC3	YLR219W	YMR105W-A	Q8TGS8	64 aa		5.65	□□□□□ -1.5
MSC3	YLR219W	ARG80	P07249	177 aa		5.65	□□□□□ -1.51
MSC3	YLR219W	NTC20	P38302	140 aa	Predicted RBP	5.65	□□□□□ -1.51
MSC3	YLR219W	SOL1	P50278	321 aa		5.65	□□□□□ -1.51
MSC3	YLR219W	SMX3	P54999	86 aa	Predicted RBP	5.65	□□□□□ -1.51
MSC3	YLR219W	FIT1	Q04433	528 aa		5.65	□□□□□ -1.51
MSC3	YLR219W	SCP1	Q08873	200 aa		5.65	□□□□□ -1.51
MSC3	YLR219W	FEX2	Q08991	375 aa		5.65	□□□□□ -1.51
MSC3	YLR219W	PUT1	P09368	476 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	CKA1	P15790	372 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	TRR1	P29509	319 aa	Known RBP	5.64	□□□□□ -1.51
MSC3	YLR219W	MIA40	P36046	403 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	UBP8	P50102	471 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	SBH2	P52871	88 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	RTT103	Q05543	409 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	LIP2	Q06005	328 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	ALG6	Q12001	544 aa	Known RBP	5.64	□□□□□ -1.51
MSC3	YLR219W	MED4	Q12343	284 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	YCL048W-A	Q2V2Q2	79 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	YPR108W-A	Q3E7B3	70 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	HBN1	Q96VH4	193 aa		5.64	□□□□□ -1.51
MSC3	YLR219W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
MSC3	YLR219W	MRPL22	P53881	309 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	HSK3	P69852	69 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	THI74	Q04083	370 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	RFM1	Q12192	310 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	RTR2	Q12378	196 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	Q0297	Q9ZZV8	51 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	STF1	P01098	86 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	FUS3	P16892	353 aa	Known RBP	5.63	□□□□□ -1.51
MSC3	YLR219W	UTP30	P36144	274 aa	Known RBP	5.63	□□□□□ -1.51
MSC3	YLR219W	OSH7	P38755	437 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	SIT1	P39980	628 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	NCA3	P46955	337 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	PIR5	P46999	287 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	NIF3	P53081	288 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	CAB5	Q03941	241 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	TSA2	Q04120	196 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	FEX1	Q08913	375 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	VAM3	Q12241	283 aa		5.63	□□□□□ -1.51
MSC3	YLR219W	COS8	P38723	381 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	PRM5	P40476	318 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	YGR210C	P42942	411 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	GEP7	P53171	287 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	ASM4	Q05166	528 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	YDL086W	Q07505	273 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	CKS1	P20486	150 aa	Known RBP	5.62	□□□□□ -1.51
MSC3	YLR219W	PAC2	P39937	518 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	RPA34	P47006	233 aa	Predicted RBP	5.62	□□□□□ -1.51
MSC3	YLR219W	XPT1	P47165	209 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	YGL262W	P53054	175 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	RIM9	Q04734	239 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	SWT1	Q12104	458 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	HUG1	Q6Q5K6	68 aa		5.62	□□□□□ -1.51
MSC3	YLR219W	TPI1	P00942	248 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-DR6	P0CX70	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-ER1	P0CX71	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-LR2	P0CX72	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-PL	P0CX73	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-JR1	P0CX74	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-LR3	P0CX75	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-ML2	P0CX76	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	YUH1	P35127	236 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	YIR020C	P40575	100 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	YFL015C	P43578	164 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	SMM1	P53720	384 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	YNR064C	P53750	290 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	RPL21A	Q02753	160 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	YDR415C	Q04033	374 aa	Predicted RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-GR1	Q12085	440 aa		5.61	□□□□□ -1.51
MSC3	YLR219W	RPL21B	Q12672	160 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	TY1A-OL	Q92392	440 aa	Known RBP	5.61	□□□□□ -1.51
MSC3	YLR219W	SUA5	P32579	426 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	CPR5	P35176	225 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	BMT5	P40493	336 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	NOC4	Q06512	552 aa	Predicted RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	YOR292C	Q08743	309 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	ADE8	P04161	214 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	QCR2	P07257	368 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	APA2	P22108	325 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	DBP2	P24783	546 aa	Known RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	ERG2	P32352	222 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	YER137C	P40083	148 aa	Known RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	CWC25	P53854	179 aa	Known RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	INN1	P53901	409 aa		5.6	□□□□□ -1.51
MSC3	YLR219W	DPB4	Q04603	196 aa	Known RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	RDL1	Q12305	139 aa	Known RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.6	□□□□□ -1.51
MSC3	YLR219W	OLE1	P21147	510 aa	Known RBP	5.59	□□□□□ -1.51
MSC3	YLR219W	ACB1	P31787	87 aa		5.59	□□□□□ -1.51
MSC3	YLR219W	REC104	P33323	182 aa		5.59	□□□□□ -1.51
MSC3	YLR219W	GLY1	P37303	387 aa	Known RBP	5.59	□□□□□ -1.51
MSC3	YLR219W	YDL009C	Q12210	107 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms