RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C RPB9P27999 122 aa1.08□□□□□ -2.24
VPS55YJR044C SRY1P36007 326 aa1.08□□□□□ -2.24
VPS55YJR044C YKR032WP36127 104 aa1.08□□□□□ -2.24
VPS55YJR044C YBR063CP38083 404 aa1.08□□□□□ -2.24
VPS55YJR044C ECM13P38195 257 aa1.08□□□□□ -2.24
VPS55YJR044C AVT2P39981 480 aa1.08□□□□□ -2.24
VPS55YJR044C YER076CP40049 302 aa1.08□□□□□ -2.24
VPS55YJR044C LSM4P40070 187 aaKnown RBP1.08□□□□□ -2.24
VPS55YJR044C SOK1P40317 901 aa1.08□□□□□ -2.24
VPS55YJR044C YIL059CP40520 121 aa1.08□□□□□ -2.24
VPS55YJR044C YKE4P40544 346 aa1.08□□□□□ -2.24
VPS55YJR044C COS4P43542 379 aa1.08□□□□□ -2.24
VPS55YJR044C UFD1P53044 361 aa1.08□□□□□ -2.24
VPS55YJR044C TOS8P53147 276 aa1.08□□□□□ -2.24
VPS55YJR044C SMD1Q02260 146 aaPredicted RBP1.08□□□□□ -2.24
VPS55YJR044C AIM34Q03673 198 aa1.08□□□□□ -2.24
VPS55YJR044C GRH1Q04410 372 aaKnown RBP1.08□□□□□ -2.24
VPS55YJR044C BRX1Q08235 291 aaKnown RBP1.08□□□□□ -2.24
VPS55YJR044C YPR063CQ12160 140 aa1.08□□□□□ -2.24
VPS55YJR044C TIM22Q12328 207 aa1.08□□□□□ -2.24
VPS55YJR044C GEP5Q12393 293 aa1.08□□□□□ -2.24
VPS55YJR044C AGC1Q12482 902 aa1.08□□□□□ -2.24
VPS55YJR044C YOR1P53049 1477 aa1.07□□□□□ -2.24
VPS55YJR044C ADH1P00330 348 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C RAD10P06838 210 aa1.07□□□□□ -2.24
VPS55YJR044C BET1P22804 142 aa1.07□□□□□ -2.24
VPS55YJR044C BUB2P26448 306 aaPredicted RBP1.07□□□□□ -2.24
VPS55YJR044C UBC6P33296 250 aaPredicted RBP1.07□□□□□ -2.24
VPS55YJR044C TKL2P33315 681 aa1.07□□□□□ -2.24
VPS55YJR044C YER121WP40076 114 aa1.07□□□□□ -2.24
VPS55YJR044C YER188WP40103 239 aa1.07□□□□□ -2.24
VPS55YJR044C ARC15P40518 154 aaRIP-Chip data1.07□□□□□ -2.24not detected
VPS55YJR044C PFS2P42841 465 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C FMP32P43557 207 aa1.07□□□□□ -2.24
VPS55YJR044C TMA22P47089 198 aaPredicted RBP1.07□□□□□ -2.24
VPS55YJR044C PGU1P47180 361 aa1.07□□□□□ -2.24
VPS55YJR044C DSK2P48510 373 aa1.07□□□□□ -2.24
VPS55YJR044C MDM34P53083 459 aa1.07□□□□□ -2.24
VPS55YJR044C SYF2P53277 215 aaPredicted RBP1.07□□□□□ -2.24
VPS55YJR044C ACT1P60010 375 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C TMA20P89886 181 aaPredicted RBP1.07□□□□□ -2.24
VPS55YJR044C LPP1Q04396 274 aa1.07□□□□□ -2.24
VPS55YJR044C SHH4Q06236 168 aa1.07□□□□□ -2.24
VPS55YJR044C NIP7Q08962 181 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C YOR283WQ12040 230 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C YPL162CQ12042 273 aa1.07□□□□□ -2.24
VPS55YJR044C YLR050CQ12155 161 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C USB1Q12208 290 aaKnown RBP1.07□□□□□ -2.24
VPS55YJR044C PRR2Q12310 699 aa1.07□□□□□ -2.24
VPS55YJR044C YBL112CQ3E7Y4 105 aa1.07□□□□□ -2.24
VPS55YJR044C PET20Q99373 253 aa1.07□□□□□ -2.24
VPS55YJR044C MBF1O14467 151 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C RPL9AP05738 191 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C CDC7P06243 507 aa1.06□□□□□ -2.24
VPS55YJR044C SEC4P07560 215 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C URA5P13298 226 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C DPM1P14020 267 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C POP7P38291 140 aa1.06□□□□□ -2.24
VPS55YJR044C DER1P38307 211 aa1.06□□□□□ -2.24
VPS55YJR044C POP4P38336 279 aa1.06□□□□□ -2.24
VPS55YJR044C RPF1P38805 295 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C YHR125WP38831 101 aa1.06□□□□□ -2.24
VPS55YJR044C GIM4P40005 111 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C PRM10P42946 383 aa1.06□□□□□ -2.24
VPS55YJR044C OST2P46964 130 aa1.06□□□□□ -2.24
VPS55YJR044C GON7P46984 123 aa1.06□□□□□ -2.24
VPS55YJR044C RPL9BP51401 191 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C YGR026WP53217 278 aa1.06□□□□□ -2.24
VPS55YJR044C YNL184CP53876 108 aa1.06□□□□□ -2.24
VPS55YJR044C YNL140CP53910 189 aa1.06□□□□□ -2.24
VPS55YJR044C DGA1Q08650 418 aa1.06□□□□□ -2.24
VPS55YJR044C YLR053CQ12026 108 aa1.06□□□□□ -2.24
VPS55YJR044C RIO1Q12196 484 aaKnown RBP1.06□□□□□ -2.24
VPS55YJR044C NOT5Q12514 560 aaPredicted RBP1.06□□□□□ -2.24
VPS55YJR044C YPL247CQ12523 523 aa1.06□□□□□ -2.24
VPS55YJR044C MHT1Q12525 324 aa1.06□□□□□ -2.24
VPS55YJR044C SAS5Q99314 248 aa1.06□□□□□ -2.24
VPS55YJR044C TAF2P23255 1407 aa1.06□□□□□ -2.24
VPS55YJR044C YHR032W-AP0C5N6 59 aa1.05□□□□□ -2.24
VPS55YJR044C YLR156WP0CE96 114 aa1.05□□□□□ -2.24
VPS55YJR044C YLR159WP0CE97 114 aa1.05□□□□□ -2.24
VPS55YJR044C YLR161WP0CE98 114 aa1.05□□□□□ -2.24
VPS55YJR044C PBI2P0CT04 75 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C PET9P18239 318 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C MRPS28P21771 286 aa1.05□□□□□ -2.24
VPS55YJR044C PEX34P25584 144 aa1.05□□□□□ -2.24
VPS55YJR044C YCR090CP25654 182 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C KDX1P36005 433 aa1.05□□□□□ -2.24
VPS55YJR044C NVJ1P38881 321 aa1.05□□□□□ -2.24
VPS55YJR044C LSM1P47017 172 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C YGR050CP53231 118 aa1.05□□□□□ -2.24
VPS55YJR044C HST4P53688 370 aa1.05□□□□□ -2.24
VPS55YJR044C COG5P53951 403 aa1.05□□□□□ -2.24
VPS55YJR044C NUP49Q02199 472 aa1.05□□□□□ -2.24
VPS55YJR044C PET191Q02772 108 aa1.05□□□□□ -2.24
VPS55YJR044C HPT1Q04178 221 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C HNT1Q04344 158 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C YMR315WQ04869 349 aaKnown RBP1.05□□□□□ -2.24
VPS55YJR044C DYN3Q04949 312 aa1.05□□□□□ -2.24
VPS55YJR044C YOR342CQ12182 319 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms