RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C SKG1P36169 355 aa1.61□□□□□ -2.15
CUP1-2YHR055C UMP1P38293 148 aa1.61□□□□□ -2.15
CUP1-2YHR055C YPL162CQ12042 273 aa1.61□□□□□ -2.15
CUP1-2YHR055C TSC3Q3E790 80 aa1.61□□□□□ -2.15
CUP1-2YHR055C SNC2P33328 115 aa1.6□□□□□ -2.15
CUP1-2YHR055C GAA1P39012 614 aa1.6□□□□□ -2.15
CUP1-2YHR055C NOP13P53883 403 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
CUP1-2YHR055C SWP1Q02795 286 aa1.6□□□□□ -2.15
CUP1-2YHR055C CDC123Q05791 360 aa1.6□□□□□ -2.15
CUP1-2YHR055C ANT1Q06497 328 aa1.6□□□□□ -2.15
CUP1-2YHR055C CDC28P00546 298 aaKnown RBP1.59□□□□□ -2.15
CUP1-2YHR055C MIC26P50087 233 aa1.59□□□□□ -2.15
CUP1-2YHR055C YNR077CP53758 84 aa1.59□□□□□ -2.15
CUP1-2YHR055C TDA8Q6B2U8 126 aa1.59□□□□□ -2.15
CUP1-2YHR055C TUS1Q06412 1307 aa1.59□□□□□ -2.16
CUP1-2YHR055C RPL24BP24000 155 aaKnown RBP1.58□□□□□ -2.16
CUP1-2YHR055C TFC1P32367 649 aa1.58□□□□□ -2.16
CUP1-2YHR055C SRY1P36007 326 aa1.58□□□□□ -2.16
CUP1-2YHR055C MRPL17P36528 281 aa1.58□□□□□ -2.16
CUP1-2YHR055C FAR7P43592 221 aa1.58□□□□□ -2.16
CUP1-2YHR055C BXI1P48558 297 aa1.58□□□□□ -2.16
CUP1-2YHR055C BRR6P53062 197 aa1.58□□□□□ -2.16
CUP1-2YHR055C GAS3Q03655 524 aa1.58□□□□□ -2.16
CUP1-2YHR055C VMA6P32366 345 aaKnown RBP1.57□□□□□ -2.16
CUP1-2YHR055C PDR18P53756 1333 aa1.57□□□□□ -2.16
CUP1-2YHR055C APS1P35181 156 aa1.56□□□□□ -2.16
CUP1-2YHR055C YBR209WP38311 105 aa1.56□□□□□ -2.16
CUP1-2YHR055C YER085CP40058 173 aa1.56□□□□□ -2.16
CUP1-2YHR055C ERJ5P43613 295 aaPredicted RBP1.56□□□□□ -2.16
CUP1-2YHR055C EAF6P47128 113 aa1.56□□□□□ -2.16
CUP1-2YHR055C TIM9O74700 87 aa1.55□□□□□ -2.16
CUP1-2YHR055C RPL28P02406 149 aaKnown RBP1.55□□□□□ -2.16
CUP1-2YHR055C RHO1P06780 209 aaKnown RBP1.55□□□□□ -2.16
CUP1-2YHR055C DBF2P22204 572 aa1.55□□□□□ -2.16
CUP1-2YHR055C TVP38P36164 337 aa1.55□□□□□ -2.16
CUP1-2YHR055C MIC12P38341 106 aa1.55□□□□□ -2.16
CUP1-2YHR055C TCD1P38756 429 aa1.55□□□□□ -2.16
CUP1-2YHR055C GVP36P40531 326 aaKnown RBP1.55□□□□□ -2.16
CUP1-2YHR055C ALG13P53178 202 aa1.55□□□□□ -2.16
CUP1-2YHR055C YDL180WQ12301 547 aa1.55□□□□□ -2.16
CUP1-2YHR055C THP2O13539 261 aaKnown RBP1.54□□□□□ -2.16
CUP1-2YHR055C YMR31P19955 123 aa1.54□□□□□ -2.16
CUP1-2YHR055C PPA2P28239 310 aa1.54□□□□□ -2.16
CUP1-2YHR055C NUP57P48837 541 aa1.54□□□□□ -2.16
CUP1-2YHR055C GPM2Q12008 311 aa1.54□□□□□ -2.16
CUP1-2YHR055C FSF1Q12029 327 aaKnown RBP1.54□□□□□ -2.16
CUP1-2YHR055C CPA1P07258 411 aaKnown RBP1.53□□□□□ -2.16
CUP1-2YHR055C RMD6P39975 231 aa1.53□□□□□ -2.16
CUP1-2YHR055C MPA43P53583 542 aaPredicted RBP1.53□□□□□ -2.16
CUP1-2YHR055C AST2P39945 430 aaKnown RBP1.52□□□□□ -2.17
CUP1-2YHR055C CUS2P53830 285 aaPredicted RBP1.52□□□□□ -2.17
CUP1-2YHR055C POP3P53833 195 aaPredicted RBP1.52□□□□□ -2.17
CUP1-2YHR055C MCP1Q12106 302 aa1.52□□□□□ -2.17
CUP1-2YHR055C ATG40Q99325 256 aa1.52□□□□□ -2.17
CUP1-2YHR055C SEC17P32602 292 aa1.51□□□□□ -2.17
CUP1-2YHR055C TCA17P32613 152 aa1.51□□□□□ -2.17
CUP1-2YHR055C YER076CP40049 302 aa1.51□□□□□ -2.17
CUP1-2YHR055C UBC7Q02159 165 aa1.51□□□□□ -2.17
CUP1-2YHR055C YIL177CP40434 1758 aa1.51□□□□□ -2.17
CUP1-2YHR055C YJL225CP40889 1758 aa1.51□□□□□ -2.17
CUP1-2YHR055C VAR1P02381 398 aa1.5□□□□□ -2.17
CUP1-2YHR055C URA5P13298 226 aaKnown RBP1.5□□□□□ -2.17
CUP1-2YHR055C BMH2P34730 273 aaKnown RBP1.5□□□□□ -2.17
CUP1-2YHR055C UTP30P36144 274 aaKnown RBP1.5□□□□□ -2.17
CUP1-2YHR055C YBR285WP38354 144 aa1.5□□□□□ -2.17
CUP1-2YHR055C KNH1P50112 268 aa1.5□□□□□ -2.17
CUP1-2YHR055C SEY1Q99287 776 aa1.5□□□□□ -2.17
CUP1-2YHR055C MSB2P32334 1306 aa1.49□□□□□ -2.17
CUP1-2YHR055C YBR121C-AP0C5L4 52 aa1.49□□□□□ -2.17
CUP1-2YHR055C KSS1P14681 368 aa1.49□□□□□ -2.17
CUP1-2YHR055C BET1P22804 142 aa1.49□□□□□ -2.17
CUP1-2YHR055C PTM1P32857 523 aa1.49□□□□□ -2.17
CUP1-2YHR055C SHE2P36068 246 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
CUP1-2YHR055C RIO2P40160 425 aaKnown RBP1.49□□□□□ -2.17
CUP1-2YHR055C JLP1Q12358 412 aa1.49□□□□□ -2.17
CUP1-2YHR055C IDH1P28834 360 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CUP1-2YHR055C RTR1P40084 226 aaPredicted RBP1.48□□□□□ -2.17
CUP1-2YHR055C YRB1P41920 201 aaKnown RBP1.48□□□□□ -2.17
CUP1-2YHR055C YNL146C-AQ3E7Z1 64 aa1.48□□□□□ -2.17
CUP1-2YHR055C YLR236CA0A023PZG4 107 aa1.47□□□□□ -2.17
CUP1-2YHR055C NHP6BP11633 99 aaKnown RBP1.47□□□□□ -2.17
CUP1-2YHR055C GCN3P14741 305 aa1.47□□□□□ -2.17
CUP1-2YHR055C CUE4Q04201 117 aaPredicted RBP1.47□□□□□ -2.17
CUP1-2YHR055C MGM101P32787 269 aaKnown RBP1.46□□□□□ -2.18
CUP1-2YHR055C RTC3P38804 111 aaPredicted RBP1.46□□□□□ -2.18
CUP1-2YHR055C OTU1P43558 301 aa1.46□□□□□ -2.18
CUP1-2YHR055C ADO1P47143 340 aaKnown RBP1.46□□□□□ -2.18
CUP1-2YHR055C YDR274CP87283 123 aa1.46□□□□□ -2.18
CUP1-2YHR055C YDR249CQ03787 373 aa1.46□□□□□ -2.18
CUP1-2YHR055C YKL183C-AQ3E765 70 aa1.46□□□□□ -2.18
CUP1-2YHR055C OPY1P38271 328 aa1.45□□□□□ -2.18
CUP1-2YHR055C SIP3P38717 1229 aa1.45□□□□□ -2.18
CUP1-2YHR055C ERG28P40030 148 aa1.45□□□□□ -2.18
CUP1-2YHR055C MGA1P53050 456 aa1.45□□□□□ -2.18
CUP1-2YHR055C YGR050CP53231 118 aa1.45□□□□□ -2.18
CUP1-2YHR055C PDR17P53844 350 aa1.45□□□□□ -2.18
CUP1-2YHR055C YHR214C-EQ8TGK0 99 aa1.45□□□□□ -2.18
CUP1-2YHR055C RPL25P04456 142 aaKnown RBP1.44□□□□□ -2.18
CUP1-2YHR055C SIR2P06700 562 aa1.44□□□□□ -2.18
CUP1-2YHR055C SEC4P07560 215 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms