RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C MIG2P53035 382 aa3.04□□□□□ -1.92
SPB4YFL002C NUP49Q02199 472 aa3.04□□□□□ -1.92
SPB4YFL002C RRP17Q04031 235 aaPredicted RBP3.04□□□□□ -1.92
SPB4YFL002C PEX12Q04370 399 aa3.04□□□□□ -1.92
SPB4YFL002C FCF1Q05498 189 aaPredicted RBP3.04□□□□□ -1.92
SPB4YFL002C BBP1Q12365 385 aa3.04□□□□□ -1.92
SPB4YFL002C YOX1P34161 385 aa3.03□□□□□ -1.92
SPB4YFL002C FMP32P43557 207 aa3.03□□□□□ -1.92
SPB4YFL002C FLC3P53121 802 aa3.03□□□□□ -1.92
SPB4YFL002C SNF4P12904 322 aa3.03□□□□□ -1.93
SPB4YFL002C DPM1P14020 267 aaKnown RBP3.03□□□□□ -1.93
SPB4YFL002C CNB1P25296 175 aa3.03□□□□□ -1.93
SPB4YFL002C ARO7P32178 256 aa3.03□□□□□ -1.93
SPB4YFL002C DER1P38307 211 aa3.03□□□□□ -1.93
SPB4YFL002C NVJ1P38881 321 aa3.03□□□□□ -1.93
SPB4YFL002C LSM4P40070 187 aaKnown RBP3.03□□□□□ -1.93
SPB4YFL002C YGL235WP53071 178 aa3.03□□□□□ -1.93
SPB4YFL002C RSM10Q03201 203 aa3.03□□□□□ -1.93
SPB4YFL002C BRX1Q08235 291 aaKnown RBP3.03□□□□□ -1.93
SPB4YFL002C RIO1Q12196 484 aaKnown RBP3.03□□□□□ -1.93
SPB4YFL002C YCR090CP25654 182 aaKnown RBP3.02□□□□□ -1.93
SPB4YFL002C MRPS9P38120 278 aa3.02□□□□□ -1.93
SPB4YFL002C RSM25P40496 264 aa3.02□□□□□ -1.93
SPB4YFL002C OST2P46964 130 aa3.02□□□□□ -1.93
SPB4YFL002C GAS3Q03655 524 aa3.02□□□□□ -1.93
SPB4YFL002C YLR053CQ12026 108 aa3.02□□□□□ -1.93
SPB4YFL002C NSL1Q12143 216 aa3.02□□□□□ -1.93
SPB4YFL002C MBF1O14467 151 aaKnown RBP3.01□□□□□ -1.93
SPB4YFL002C YPR170W-BP0C5R9 85 aa3.01□□□□□ -1.93
SPB4YFL002C LDB16P25587 256 aa3.01□□□□□ -1.93
SPB4YFL002C YGP1P38616 354 aaKnown RBP3.01□□□□□ -1.93
SPB4YFL002C YAR068WP39564 161 aa3.01□□□□□ -1.93
SPB4YFL002C AST2P39945 430 aaKnown RBP3.01□□□□□ -1.93
SPB4YFL002C EDC3P39998 551 aaKnown RBP3.01□□□□□ -1.93
SPB4YFL002C PFS2P42841 465 aaKnown RBP3.01□□□□□ -1.93
SPB4YFL002C HST4P53688 370 aa3.01□□□□□ -1.93
SPB4YFL002C RAD10P06838 210 aa3□□□□□ -1.93
SPB4YFL002C ADH3P07246 375 aaKnown RBP3□□□□□ -1.93
SPB4YFL002C RPS28BP0C0X0 67 aaKnown RBP3□□□□□ -1.93
SPB4YFL002C RPS24AP0CX31 135 aaKnown RBP3□□□□□ -1.93
SPB4YFL002C RPS24BP0CX32 135 aaKnown RBP3□□□□□ -1.93
SPB4YFL002C ATG22P25568 528 aa3□□□□□ -1.93
SPB4YFL002C AHC2P25649 128 aa3□□□□□ -1.93
SPB4YFL002C POP4P38336 279 aa3□□□□□ -1.93
SPB4YFL002C GLE2P40066 365 aa3□□□□□ -1.93
SPB4YFL002C SCW10Q04951 389 aa3□□□□□ -1.93
SPB4YFL002C ATG39Q06159 398 aa3□□□□□ -1.93
SPB4YFL002C YPL162CQ12042 273 aa3□□□□□ -1.93
SPB4YFL002C RDI1Q12434 202 aa3□□□□□ -1.93
SPB4YFL002C PEX11Q12462 236 aa3□□□□□ -1.93
SPB4YFL002C RPS28AQ3E7X9 67 aaPredicted RBP3□□□□□ -1.93
SPB4YFL002C HIS3P06633 220 aa3□□□□□ -1.93
SPB4YFL002C SEC17P32602 292 aa3□□□□□ -1.93
SPB4YFL002C UTP30P36144 274 aaKnown RBP3□□□□□ -1.93
SPB4YFL002C ECO1P43605 281 aa3□□□□□ -1.93
SPB4YFL002C AIM34Q03673 198 aa3□□□□□ -1.93
SPB4YFL002C SUE1Q06524 206 aa3□□□□□ -1.93
SPB4YFL002C YFR032C-BQ8TGU2 87 aa3□□□□□ -1.93
SPB4YFL002C CMD1P06787 147 aaKnown RBP2.99□□□□□ -1.93
SPB4YFL002C TKL2P33315 681 aa2.99□□□□□ -1.93
SPB4YFL002C SRP102P36057 244 aaPredicted RBP2.99□□□□□ -1.93
SPB4YFL002C YFH7P43591 353 aa2.99□□□□□ -1.93
SPB4YFL002C LSM1P47017 172 aaKnown RBP2.99□□□□□ -1.93
SPB4YFL002C HPT1Q04178 221 aaKnown RBP2.99□□□□□ -1.93
SPB4YFL002C YPR063CQ12160 140 aa2.99□□□□□ -1.93
SPB4YFL002C PET20Q99373 253 aa2.99□□□□□ -1.93
SPB4YFL002C YLR156WP0CE96 114 aa2.98□□□□□ -1.93
SPB4YFL002C YLR159WP0CE97 114 aa2.98□□□□□ -1.93
SPB4YFL002C YLR161WP0CE98 114 aa2.98□□□□□ -1.93
SPB4YFL002C SEC14P24280 304 aaKnown RBP2.98□□□□□ -1.93
SPB4YFL002C SKG1P36169 355 aa2.98□□□□□ -1.93
SPB4YFL002C ARC15P40518 154 aaRIP-Chip data2.98□□□□□ -1.93not detected
SPB4YFL002C ARP3P47117 449 aaKnown RBP2.98□□□□□ -1.93
SPB4YFL002C SBH2P52871 88 aa2.98□□□□□ -1.93
SPB4YFL002C YDR249CQ03787 373 aa2.98□□□□□ -1.93
SPB4YFL002C PLP1Q04004 230 aa2.98□□□□□ -1.93
SPB4YFL002C SHH4Q06236 168 aa2.98□□□□□ -1.93
SPB4YFL002C PSF1Q12488 208 aa2.98□□□□□ -1.93
SPB4YFL002C REP2P03872 296 aa2.98□□□□□ -1.93
SPB4YFL002C Q0255P03881 472 aa2.98□□□□□ -1.93
SPB4YFL002C YHR125WP38831 101 aa2.98□□□□□ -1.93
SPB4YFL002C ICE2P40499 491 aa2.98□□□□□ -1.93
SPB4YFL002C ARO8P53090 500 aaKnown RBP2.98□□□□□ -1.93
SPB4YFL002C YLR031WQ07978 186 aa2.98□□□□□ -1.93
SPB4YFL002C RPL9AP05738 191 aaKnown RBP2.97□□□□□ -1.93
SPB4YFL002C RPB3P16370 318 aaKnown RBP2.97□□□□□ -1.93
SPB4YFL002C PET9P18239 318 aaKnown RBP2.97□□□□□ -1.93
SPB4YFL002C GON7P46984 123 aa2.97□□□□□ -1.93
SPB4YFL002C RPL9BP51401 191 aaKnown RBP2.97□□□□□ -1.93
SPB4YFL002C COS6P53344 381 aa2.97□□□□□ -1.93
SPB4YFL002C APJ1P53940 528 aa2.97□□□□□ -1.93
SPB4YFL002C YDC1Q02896 317 aa2.97□□□□□ -1.93
SPB4YFL002C SCO1P23833 295 aa2.96□□□□□ -1.94
SPB4YFL002C NQM1P53228 333 aaPredicted RBP2.96□□□□□ -1.94
SPB4YFL002C PGA1P53896 198 aa2.96□□□□□ -1.94
SPB4YFL002C SWP1Q02795 286 aa2.96□□□□□ -1.94
SPB4YFL002C GPI17Q04080 534 aa2.96□□□□□ -1.94
SPB4YFL002C DYN3Q04949 312 aa2.96□□□□□ -1.94
SPB4YFL002C YOR268CQ08734 132 aa2.96□□□□□ -1.94
SPB4YFL002C MCP1Q12106 302 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms