RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RNP1P32385 249 aa1.73□□□□□ -2.13
SSF2YDR312W SRB4P32569 687 aa1.73□□□□□ -2.13
SSF2YDR312W MRPL39P36533 70 aa1.73□□□□□ -2.13
SSF2YDR312W YBL081WP38180 368 aaKnown RBP1.73□□□□□ -2.13
SSF2YDR312W HEK2P38199 381 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SSF2YDR312W SSH1P38353 490 aaKnown RBP1.73□□□□□ -2.13
SSF2YDR312W YHL049CP38722 271 aa1.73□□□□□ -2.13
SSF2YDR312W ARN2P38724 620 aa1.73□□□□□ -2.13
SSF2YDR312W BIG1P38813 335 aa1.73□□□□□ -2.13
SSF2YDR312W GIM4P40005 111 aaKnown RBP1.73□□□□□ -2.13
SSF2YDR312W YER084WP40057 128 aa1.73□□□□□ -2.13
SSF2YDR312W GCN20P43535 752 aaKnown RBP1.73□□□□□ -2.13
SSF2YDR312W NIF3P53081 288 aa1.73□□□□□ -2.13
SSF2YDR312W MAL12P53341 584 aa1.73□□□□□ -2.13
SSF2YDR312W FCF1Q05498 189 aaPredicted RBP1.73□□□□□ -2.13
SSF2YDR312W LDB18Q07887 179 aa1.73□□□□□ -2.13
SSF2YDR312W FEX1Q08913 375 aa1.73□□□□□ -2.13
SSF2YDR312W FEX2Q08991 375 aa1.73□□□□□ -2.13
SSF2YDR312W MSH5Q12175 901 aa1.73□□□□□ -2.13
SSF2YDR312W ATG31Q12421 196 aa1.73□□□□□ -2.13
SSF2YDR312W CCW14O13547 238 aa1.72□□□□□ -2.13
SSF2YDR312W CDC33P07260 213 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W KRE1P17260 313 aa1.72□□□□□ -2.13
SSF2YDR312W PRP18P33411 251 aaPredicted RBP1.72□□□□□ -2.13
SSF2YDR312W RPS27AP35997 82 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W JEN1P36035 616 aa1.72□□□□□ -2.13
SSF2YDR312W YKR032WP36127 104 aa1.72□□□□□ -2.13
SSF2YDR312W RPS27BP38711 82 aa1.72□□□□□ -2.13
SSF2YDR312W SMB1P40018 196 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W PET117Q02771 107 aa1.72□□□□□ -2.13
SSF2YDR312W YPL039WQ03080 316 aa1.72□□□□□ -2.13
SSF2YDR312W GOT1Q03554 138 aa1.72□□□□□ -2.13
SSF2YDR312W TRM12Q04235 462 aa1.72□□□□□ -2.13
SSF2YDR312W RNH1Q04740 348 aa1.72□□□□□ -2.13
SSF2YDR312W SPO77Q06134 477 aa1.72□□□□□ -2.13
SSF2YDR312W YPR147CQ06522 304 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W COQ10Q08058 207 aa1.72□□□□□ -2.13
SSF2YDR312W SLD7Q08457 257 aa1.72□□□□□ -2.13
SSF2YDR312W RRS1Q08746 203 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W NOT5Q12514 560 aaPredicted RBP1.72□□□□□ -2.13
SSF2YDR312W EFG1Q3E705 233 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W YBL112CQ3E7Y4 105 aa1.72□□□□□ -2.13
SSF2YDR312W SEY1Q99287 776 aa1.72□□□□□ -2.13
SSF2YDR312W MRPL25P23369 157 aa1.72□□□□□ -2.13
SSF2YDR312W TOM40P23644 387 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W YCR016WP25617 290 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W GDH2P33327 1092 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W COS8P38723 381 aa1.72□□□□□ -2.13
SSF2YDR312W BFR1P38934 470 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SSF2YDR312W COG3P40094 801 aa1.72□□□□□ -2.13
SSF2YDR312W SYF2P53277 215 aaPredicted RBP1.72□□□□□ -2.13
SSF2YDR312W SPG4Q04438 115 aa1.72□□□□□ -2.13
SSF2YDR312W FAR8Q05040 523 aa1.72□□□□□ -2.13
SSF2YDR312W RRP40Q08285 240 aaKnown RBP1.72□□□□□ -2.13
SSF2YDR312W YPL247CQ12523 523 aa1.72□□□□□ -2.13
SSF2YDR312W YBL008W-AQ3E821 79 aa1.72□□□□□ -2.13
SSF2YDR312W STT4P37297 1900 aa1.71□□□□□ -2.14
SSF2YDR312W YLR462WO13556 202 aa1.71□□□□□ -2.14
SSF2YDR312W RPL26AP05743 127 aaKnown RBP1.71□□□□□ -2.14
SSF2YDR312W CCA1P21269 546 aa1.71□□□□□ -2.14
SSF2YDR312W DBF2P22204 572 aa1.71□□□□□ -2.14
SSF2YDR312W UTR5P32630 166 aa1.71□□□□□ -2.14
SSF2YDR312W CLB6P32943 380 aa1.71□□□□□ -2.14
SSF2YDR312W YKL075CP36083 450 aa1.71□□□□□ -2.14
SSF2YDR312W CUE1P38428 203 aa1.71□□□□□ -2.14
SSF2YDR312W YGP1P38616 354 aaKnown RBP1.71□□□□□ -2.14
SSF2YDR312W PRE6P40303 254 aaKnown RBP1.71□□□□□ -2.14
SSF2YDR312W YJL028WP47062 111 aa1.71□□□□□ -2.14
SSF2YDR312W YJL016WP47072 561 aa1.71□□□□□ -2.14
SSF2YDR312W HOC1P47124 396 aa1.71□□□□□ -2.14
SSF2YDR312W ILM1P47155 203 aa1.71□□□□□ -2.14
SSF2YDR312W RMR1P53060 241 aa1.71□□□□□ -2.14
SSF2YDR312W RPL26BP53221 127 aaKnown RBP1.71□□□□□ -2.14
SSF2YDR312W MIX17Q03667 156 aa1.71□□□□□ -2.14
SSF2YDR312W MSA1Q08471 629 aa1.71□□□□□ -2.14
SSF2YDR312W YOR029WQ12243 111 aa1.71□□□□□ -2.14
SSF2YDR312W AGC1Q12482 902 aa1.71□□□□□ -2.14
SSF2YDR312W DPM1P14020 267 aaKnown RBP1.7□□□□□ -2.14
SSF2YDR312W RPO26P20435 155 aa1.7□□□□□ -2.14
SSF2YDR312W RPL24BP24000 155 aaKnown RBP1.7□□□□□ -2.14
SSF2YDR312W MGM101P32787 269 aaKnown RBP1.7□□□□□ -2.14
SSF2YDR312W SSO1P32867 290 aa1.7□□□□□ -2.14
SSF2YDR312W YKL102CP34249 101 aa1.7□□□□□ -2.14
SSF2YDR312W GOS1P38736 223 aa1.7□□□□□ -2.14
SSF2YDR312W YHR127WP38833 243 aaKnown RBP1.7□□□□□ -2.14
SSF2YDR312W AIM18P38884 321 aa1.7□□□□□ -2.14
SSF2YDR312W YER085CP40058 173 aa1.7□□□□□ -2.14
SSF2YDR312W COX15P40086 486 aa1.7□□□□□ -2.14
SSF2YDR312W OST2P46964 130 aa1.7□□□□□ -2.14
SSF2YDR312W HAM1P47119 197 aaKnown RBP1.7□□□□□ -2.14
SSF2YDR312W CTF19Q02732 369 aa1.7□□□□□ -2.14
SSF2YDR312W YMR279CQ03263 540 aa1.7□□□□□ -2.14
SSF2YDR312W YOL019WQ08157 551 aa1.7□□□□□ -2.14
SSF2YDR312W YOR186WQ08560 144 aa1.7□□□□□ -2.14
SSF2YDR312W GEP5Q12393 293 aa1.7□□□□□ -2.14
SSF2YDR312W YOR032W-AQ8TGS1 66 aa1.7□□□□□ -2.14
SSF2YDR312W SPT3P06844 337 aa1.69□□□□□ -2.14
SSF2YDR312W ADH3P07246 375 aaKnown RBP1.69□□□□□ -2.14
SSF2YDR312W SCM4P32564 187 aa1.69□□□□□ -2.14
SSF2YDR312W VPS21P36017 210 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms