RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SYM1Q06563 197 aa11.32□□□□□ -0.6
SSA1YAL005C YCR101CP25607 182 aa11.31□□□□□ -0.6
SSA1YAL005C WSS1P38838 269 aa11.31□□□□□ -0.6
SSA1YAL005C VBA1Q04301 562 aa11.31□□□□□ -0.6
SSA1YAL005C SDO1Q07953 250 aaKnown RBP11.31□□□□□ -0.6
SSA1YAL005C URA3P03962 267 aa11.31□□□□□ -0.6
SSA1YAL005C OLE1P21147 510 aaKnown RBP11.31□□□□□ -0.6
SSA1YAL005C PAN3P36102 679 aaPredicted RBP11.31□□□□□ -0.6
SSA1YAL005C SWD3P38123 315 aa11.31□□□□□ -0.6
SSA1YAL005C YBR197CP38306 217 aa11.31□□□□□ -0.6
SSA1YAL005C CTR2P38865 189 aa11.31□□□□□ -0.6
SSA1YAL005C HNT2P49775 206 aa11.31□□□□□ -0.6
SSA1YAL005C GTF1P53260 183 aaPredicted RBP11.31□□□□□ -0.6
SSA1YAL005C ALG9P53868 555 aaKnown RBP11.31□□□□□ -0.6
SSA1YAL005C YNL046WP53956 172 aa11.31□□□□□ -0.6
SSA1YAL005C CAC2Q04199 468 aa11.31□□□□□ -0.6
SSA1YAL005C CPR4P25334 318 aa11.3□□□□□ -0.6
SSA1YAL005C DAL3P32459 195 aa11.3□□□□□ -0.6
SSA1YAL005C BNA2P47125 453 aa11.3□□□□□ -0.6
SSA1YAL005C FRE8Q12209 686 aa11.3□□□□□ -0.6
SSA1YAL005C YOR192C-CQ3E736 78 aa11.3□□□□□ -0.6
SSA1YAL005C YBL029C-AQ3E756 94 aa11.3□□□□□ -0.6
SSA1YAL005C GRX2P17695 143 aaKnown RBP11.29□□□□□ -0.6
SSA1YAL005C SLM1P40485 686 aa11.29□□□□□ -0.6
SSA1YAL005C TEX1P53851 422 aaKnown RBP11.29□□□□□ -0.6
SSA1YAL005C YPL067CQ02754 198 aa11.29□□□□□ -0.6
SSA1YAL005C NGL2Q03264 515 aaKnown RBP11.29□□□□□ -0.6
SSA1YAL005C ATG40Q99325 256 aa11.29□□□□□ -0.6
SSA1YAL005C MOT3P54785 490 aaKnown RBP11.29□□□□□ -0.6
SSA1YAL005C UPS1Q05776 175 aa11.29□□□□□ -0.6
SSA1YAL005C RTR2Q12378 196 aa11.29□□□□□ -0.6
SSA1YAL005C VMA3P25515 160 aa11.28□□□□□ -0.6
SSA1YAL005C DIA1P54005 336 aa11.28□□□□□ -0.6
SSA1YAL005C GMC1Q04399 608 aa11.28□□□□□ -0.6
SSA1YAL005C YOR029WQ12243 111 aa11.28□□□□□ -0.6
SSA1YAL005C RPB7P34087 171 aa11.27□□□□□ -0.6
SSA1YAL005C POP8P38208 133 aa11.27□□□□□ -0.6
SSA1YAL005C YOL118CQ08259 102 aa11.27□□□□□ -0.6
SSA1YAL005C UBA3Q99344 299 aa11.27□□□□□ -0.6
SSA1YAL005C CDS1P38221 457 aa11.27□□□□□ -0.61
SSA1YAL005C SDH8P38345 138 aa11.27□□□□□ -0.61
SSA1YAL005C YIL012WP40551 113 aa11.27□□□□□ -0.61
SSA1YAL005C WSC3Q12215 556 aa11.27□□□□□ -0.61
SSA1YAL005C GCN3P14741 305 aa11.26□□□□□ -0.61
SSA1YAL005C TRM13Q12383 476 aa11.26□□□□□ -0.61
SSA1YAL005C SAR1P20606 190 aaKnown RBP11.25□□□□□ -0.61
SSA1YAL005C MRP17P28778 131 aa11.25□□□□□ -0.61
SSA1YAL005C SOL1P50278 321 aa11.25□□□□□ -0.61
SSA1YAL005C DXO1Q06349 442 aa11.25□□□□□ -0.61
SSA1YAL005C VAM3Q12241 283 aa11.25□□□□□ -0.61
SSA1YAL005C YLR365WQ7LIF2 110 aa11.25□□□□□ -0.61
SSA1YAL005C YMR105W-AQ8TGS8 64 aa11.25□□□□□ -0.61
SSA1YAL005C MIR1P23641 311 aaKnown RBP11.25□□□□□ -0.61
SSA1YAL005C SWD2P36104 329 aaPredicted RBP11.25□□□□□ -0.61
SSA1YAL005C YJR096WP47137 282 aa11.25□□□□□ -0.61
SSA1YAL005C YCL048W-AQ2V2Q2 79 aa11.25□□□□□ -0.61
SSA1YAL005C SBH2P52871 88 aa11.24□□□□□ -0.61
SSA1YAL005C SMX3P54999 86 aaPredicted RBP11.24□□□□□ -0.61
SSA1YAL005C FIT1Q04433 528 aa11.24□□□□□ -0.61
SSA1YAL005C LIP2Q06005 328 aa11.24□□□□□ -0.61
SSA1YAL005C SCP1Q08873 200 aa11.24□□□□□ -0.61
SSA1YAL005C FEX2Q08991 375 aa11.24□□□□□ -0.61
SSA1YAL005C TRR1P29509 319 aaKnown RBP11.23□□□□□ -0.61
SSA1YAL005C SGN1P40561 250 aaKnown RBP RIP-Chip data11.23□□□□□ -0.61not detected
SSA1YAL005C RFM1Q12192 310 aa11.23□□□□□ -0.61
SSA1YAL005C HSK3P69852 69 aa11.23□□□□□ -0.61
SSA1YAL005C Q0297Q9ZZV8 51 aa11.23□□□□□ -0.61
SSA1YAL005C PUT1P09368 476 aa11.22□□□□□ -0.61
SSA1YAL005C VMA16P23968 213 aa11.22□□□□□ -0.61
SSA1YAL005C COS8P38723 381 aa11.22□□□□□ -0.61
SSA1YAL005C AIM46P38885 310 aa11.22□□□□□ -0.61
SSA1YAL005C PIR5P46999 287 aa11.22□□□□□ -0.61
SSA1YAL005C UBP8P50102 471 aa11.22□□□□□ -0.61
SSA1YAL005C TSA2Q04120 196 aa11.22□□□□□ -0.61
SSA1YAL005C YPR108W-AQ3E7B3 70 aa11.22□□□□□ -0.61
SSA1YAL005C LSM12P38828 187 aaKnown RBP11.21□□□□□ -0.61
SSA1YAL005C NCA3P46955 337 aa11.21□□□□□ -0.61
SSA1YAL005C GEP7P53171 287 aa11.21□□□□□ -0.61
SSA1YAL005C CAB5Q03941 241 aa11.21□□□□□ -0.61
SSA1YAL005C ALG6Q12001 544 aaKnown RBP11.21□□□□□ -0.61
SSA1YAL005C NIF3P53081 288 aa11.21□□□□□ -0.62
SSA1YAL005C THI74Q04083 370 aa11.21□□□□□ -0.62
SSA1YAL005C YCL001W-BQ96VH2 84 aa11.21□□□□□ -0.62
SSA1YAL005C GNP1P48813 663 aa11.2□□□□□ -0.62
SSA1YAL005C DUO1P53168 247 aaKnown RBP11.2□□□□□ -0.62
SSA1YAL005C MRPL22P53881 309 aa11.2□□□□□ -0.62
SSA1YAL005C UTP30P36144 274 aaKnown RBP11.19□□□□□ -0.62
SSA1YAL005C PAC2P39937 518 aa11.19□□□□□ -0.62
SSA1YAL005C YIR020CP40575 100 aa11.19□□□□□ -0.62
SSA1YAL005C XPT1P47165 209 aa11.19□□□□□ -0.62
SSA1YAL005C RIM9Q04734 239 aa11.19□□□□□ -0.62
SSA1YAL005C FEX1Q08913 375 aa11.19□□□□□ -0.62
SSA1YAL005C PRE9P23638 258 aaKnown RBP11.19□□□□□ -0.62
SSA1YAL005C SEC72P39742 193 aaKnown RBP11.19□□□□□ -0.62
SSA1YAL005C PRM5P40476 318 aa11.19□□□□□ -0.62
SSA1YAL005C BMT5P40493 336 aa11.19□□□□□ -0.62
SSA1YAL005C YGR210CP42942 411 aa11.19□□□□□ -0.62
SSA1YAL005C YGL262WP53054 175 aa11.19□□□□□ -0.62
SSA1YAL005C YNR064CP53750 290 aa11.19□□□□□ -0.62
SSA1YAL005C SWT1Q12104 458 aa11.19□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms