RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RPB9P27999 122 aa6.67□□□□□ -1.34
LSP1YPL004C CAT5P41735 233 aa6.67□□□□□ -1.34
LSP1YPL004C OTU1P43558 301 aa6.67□□□□□ -1.34
LSP1YPL004C HNT2P49775 206 aa6.67□□□□□ -1.34
LSP1YPL004C ARG5,6Q01217 863 aa6.67□□□□□ -1.34
LSP1YPL004C YDL009CQ12210 107 aa6.67□□□□□ -1.34
LSP1YPL004C SPT14P32363 452 aa6.66□□□□□ -1.34
LSP1YPL004C TCA17P32613 152 aa6.66□□□□□ -1.34
LSP1YPL004C AGA2P32781 87 aa6.66□□□□□ -1.34
LSP1YPL004C RIB7P33312 244 aa6.66□□□□□ -1.34
LSP1YPL004C SWD2P36104 329 aaPredicted RBP6.66□□□□□ -1.34
LSP1YPL004C IPI1P38803 334 aaPredicted RBP6.66□□□□□ -1.34
LSP1YPL004C HPA3P39979 161 aa6.66□□□□□ -1.34
LSP1YPL004C MIT1P40002 666 aa6.66□□□□□ -1.34
LSP1YPL004C PIR5P46999 287 aa6.66□□□□□ -1.34
LSP1YPL004C CWC23P52868 283 aaPredicted RBP6.66□□□□□ -1.34
LSP1YPL004C YGR042WP53227 271 aa6.66□□□□□ -1.34
LSP1YPL004C ECM18Q04623 453 aa6.66□□□□□ -1.34
LSP1YPL004C RRP15Q06511 250 aaPredicted RBP6.66□□□□□ -1.34
LSP1YPL004C IRC25Q07951 179 aa6.66□□□□□ -1.34
LSP1YPL004C YPL199CQ08954 240 aa6.66□□□□□ -1.34
LSP1YPL004C ATG40Q99325 256 aa6.66□□□□□ -1.34
LSP1YPL004C CYC1P00044 109 aaPredicted RBP6.65□□□□□ -1.34
LSP1YPL004C CPR5P35176 225 aa6.65□□□□□ -1.34
LSP1YPL004C SWD3P38123 315 aa6.65□□□□□ -1.34
LSP1YPL004C NTC20P38302 140 aaPredicted RBP6.65□□□□□ -1.34
LSP1YPL004C AIM46P38885 310 aa6.65□□□□□ -1.34
LSP1YPL004C OKP1P53298 406 aa6.65□□□□□ -1.34
LSP1YPL004C YMR317WQ04893 1140 aa6.65□□□□□ -1.34
LSP1YPL004C PRP11Q07350 266 aaPredicted RBP6.65□□□□□ -1.34
LSP1YPL004C GDH1P07262 454 aaKnown RBP6.64□□□□□ -1.35
LSP1YPL004C ATP10P18496 279 aa6.64□□□□□ -1.35
LSP1YPL004C OCH1P31755 480 aa6.64□□□□□ -1.35
LSP1YPL004C FLO10P36170 1169 aa6.64□□□□□ -1.35
LSP1YPL004C PAC2P39937 518 aa6.64□□□□□ -1.35
LSP1YPL004C AIM20P40451 204 aa6.64□□□□□ -1.35
LSP1YPL004C PRM5P40476 318 aa6.64□□□□□ -1.35
LSP1YPL004C IMD3P50095 523 aaKnown RBP6.64□□□□□ -1.35
LSP1YPL004C TPN1P53099 579 aa6.64□□□□□ -1.35
LSP1YPL004C HSK3P69852 69 aa6.64□□□□□ -1.35
LSP1YPL004C ARR2Q06597 130 aa6.64□□□□□ -1.35
LSP1YPL004C RFM1Q12192 310 aa6.64□□□□□ -1.35
LSP1YPL004C VAM3Q12241 283 aa6.64□□□□□ -1.35
LSP1YPL004C URA3P03962 267 aa6.63□□□□□ -1.35
LSP1YPL004C YLL053CP0CD98 152 aa6.63□□□□□ -1.35
LSP1YPL004C FUS3P16892 353 aaKnown RBP6.63□□□□□ -1.35
LSP1YPL004C ATG22P25568 528 aa6.63□□□□□ -1.35
LSP1YPL004C ERG3P32353 365 aa6.63□□□□□ -1.35
LSP1YPL004C SOR1P35497 357 aaKnown RBP6.63□□□□□ -1.35
LSP1YPL004C MRPL27P36526 146 aaPredicted RBP6.63□□□□□ -1.35
LSP1YPL004C FIG1P38224 298 aa6.63□□□□□ -1.35
LSP1YPL004C YBR197CP38306 217 aa6.63□□□□□ -1.35
LSP1YPL004C YHR122WP38829 231 aa6.63□□□□□ -1.35
LSP1YPL004C DIE2P50076 525 aa6.63□□□□□ -1.35
LSP1YPL004C SOL1P50278 321 aa6.63□□□□□ -1.35
LSP1YPL004C WSC2P53832 503 aa6.63□□□□□ -1.35
LSP1YPL004C RIM9Q04734 239 aa6.63□□□□□ -1.35
LSP1YPL004C ADH6Q04894 360 aaKnown RBP6.63□□□□□ -1.35
LSP1YPL004C PHO92Q06390 306 aa6.63□□□□□ -1.35
LSP1YPL004C SOR2Q07786 357 aa6.63□□□□□ -1.35
LSP1YPL004C YLR031WQ07978 186 aa6.63□□□□□ -1.35
LSP1YPL004C CCW14O13547 238 aa6.62□□□□□ -1.35
LSP1YPL004C PET54P10834 293 aa6.62□□□□□ -1.35
LSP1YPL004C HYM1P32464 399 aa6.62□□□□□ -1.35
LSP1YPL004C RPB7P34087 171 aa6.62□□□□□ -1.35
LSP1YPL004C TTI2P47168 421 aa6.62□□□□□ -1.35
LSP1YPL004C YGL114WP53134 725 aa6.62□□□□□ -1.35
LSP1YPL004C LSM7P53905 115 aaKnown RBP6.62□□□□□ -1.35
LSP1YPL004C RPL21AQ02753 160 aaKnown RBP6.62□□□□□ -1.35
LSP1YPL004C FIT1Q04433 528 aa6.62□□□□□ -1.35
LSP1YPL004C YOR385WQ08909 290 aa6.62□□□□□ -1.35
LSP1YPL004C RPL21BQ12672 160 aaKnown RBP6.62□□□□□ -1.35
LSP1YPL004C YOR192C-CQ3E736 78 aa6.62□□□□□ -1.35
LSP1YPL004C YLR365WQ7LIF2 110 aa6.62□□□□□ -1.35
LSP1YPL004C GAL1P04385 528 aa6.61□□□□□ -1.35
LSP1YPL004C CAP2P13517 287 aa6.61□□□□□ -1.35
LSP1YPL004C BUD23P25627 275 aaPredicted RBP6.61□□□□□ -1.35
LSP1YPL004C GAR1P28007 205 aaKnown RBP6.61□□□□□ -1.35
LSP1YPL004C ACH1P32316 526 aa6.61□□□□□ -1.35
LSP1YPL004C ADH5P38113 351 aaKnown RBP6.61□□□□□ -1.35
LSP1YPL004C YER188WP40103 239 aa6.61□□□□□ -1.35
LSP1YPL004C BMT5P40493 336 aa6.61□□□□□ -1.35
LSP1YPL004C YFL015CP43578 164 aa6.61□□□□□ -1.35
LSP1YPL004C YJR011CP47086 261 aaPredicted RBP6.61□□□□□ -1.35
LSP1YPL004C AIM25P47140 327 aa6.61□□□□□ -1.35
LSP1YPL004C SLX9P53251 210 aaPredicted RBP6.61□□□□□ -1.35
LSP1YPL004C APJ1P53940 528 aa6.61□□□□□ -1.35
LSP1YPL004C MOT3P54785 490 aaKnown RBP6.61□□□□□ -1.35
LSP1YPL004C TY1A-MR1Q04215 440 aa6.61□□□□□ -1.35
LSP1YPL004C NOC4Q06512 552 aaPredicted RBP6.61□□□□□ -1.35
LSP1YPL004C BBP1Q12365 385 aa6.61□□□□□ -1.35
LSP1YPL004C DGK1Q12382 290 aa6.61□□□□□ -1.35
LSP1YPL004C HTZ1Q12692 134 aaKnown RBP6.61□□□□□ -1.35
LSP1YPL004C GPM1P00950 247 aaKnown RBP6.6□□□□□ -1.35
LSP1YPL004C PUP1P25043 261 aa6.6□□□□□ -1.35
LSP1YPL004C CPR4P25334 318 aa6.6□□□□□ -1.35
LSP1YPL004C RNP1P32385 249 aa6.6□□□□□ -1.35
LSP1YPL004C FMT1P32785 401 aa6.6□□□□□ -1.35
LSP1YPL004C YUH1P35127 236 aa6.6□□□□□ -1.35
LSP1YPL004C ALG14P38242 237 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms