RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YJR015WP47090 510 aa3.39□□□□□ -1.87
ABP140YOR239W MUP1P50276 574 aa3.39□□□□□ -1.87
ABP140YOR239W YIP4P53093 235 aa3.39□□□□□ -1.87
ABP140YOR239W VHT1P53241 593 aa3.39□□□□□ -1.87
ABP140YOR239W RNH201P53942 307 aa3.39□□□□□ -1.87
ABP140YOR239W GIS1Q03833 894 aa3.39□□□□□ -1.87
ABP140YOR239W CRF1Q04930 467 aa3.39□□□□□ -1.87
ABP140YOR239W MRX8Q05473 314 aa3.39□□□□□ -1.87
ABP140YOR239W CDD1Q06549 142 aa3.39□□□□□ -1.87
ABP140YOR239W YOR385WQ08909 290 aa3.39□□□□□ -1.87
ABP140YOR239W GRE1Q08969 168 aa3.39□□□□□ -1.87
ABP140YOR239W TGL5Q12043 749 aa3.39□□□□□ -1.87
ABP140YOR239W YDL157CQ12082 118 aa3.39□□□□□ -1.87
ABP140YOR239W PER33Q12144 273 aa3.39□□□□□ -1.87
ABP140YOR239W FIG2P25653 1609 aa3.38□□□□□ -1.87
ABP140YOR239W NOP1P15646 327 aaKnown RBP3.38□□□□□ -1.87
ABP140YOR239W MEK1P24719 497 aaPredicted RBP3.38□□□□□ -1.87
ABP140YOR239W MRP49P32388 137 aa3.38□□□□□ -1.87
ABP140YOR239W PUB1P32588 453 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
ABP140YOR239W ALK2P32789 676 aaPredicted RBP3.38□□□□□ -1.87
ABP140YOR239W SKN1P33336 771 aa3.38□□□□□ -1.87
ABP140YOR239W YKL187CP34231 750 aa3.38□□□□□ -1.87
ABP140YOR239W SHO1P40073 367 aa3.38□□□□□ -1.87
ABP140YOR239W MAF1P41910 395 aa3.38□□□□□ -1.87
ABP140YOR239W RRT5P43607 289 aa3.38□□□□□ -1.87
ABP140YOR239W IKS1P47042 667 aa3.38□□□□□ -1.87
ABP140YOR239W SBH2P52871 88 aa3.38□□□□□ -1.87
ABP140YOR239W RMD9P53140 646 aaKnown RBP3.38□□□□□ -1.87
ABP140YOR239W SGF73P53165 657 aa3.38□□□□□ -1.87
ABP140YOR239W ATG4P53867 494 aa3.38□□□□□ -1.87
ABP140YOR239W SMX3P54999 86 aaPredicted RBP3.38□□□□□ -1.87
ABP140YOR239W HRI1Q05905 244 aaKnown RBP3.38□□□□□ -1.87
ABP140YOR239W PRP11Q07350 266 aaPredicted RBP3.38□□□□□ -1.87
ABP140YOR239W IRC13Q08630 104 aa3.38□□□□□ -1.87
ABP140YOR239W BSC1Q12140 328 aa3.38□□□□□ -1.87
ABP140YOR239W RRG1Q12167 365 aaPredicted RBP3.38□□□□□ -1.87
ABP140YOR239W GEP5Q12393 293 aa3.38□□□□□ -1.87
ABP140YOR239W YDR461C-AQ2V2P7 80 aa3.38□□□□□ -1.87
ABP140YOR239W OLE1P21147 510 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W NPR1P22211 790 aa3.37□□□□□ -1.87
ABP140YOR239W HOG1P32485 435 aa3.37□□□□□ -1.87
ABP140YOR239W MDL1P33310 695 aa3.37□□□□□ -1.87
ABP140YOR239W DUT1P33317 147 aa3.37□□□□□ -1.87
ABP140YOR239W MTR2P34232 184 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W PAN3P36102 679 aaPredicted RBP3.37□□□□□ -1.87
ABP140YOR239W MIX23P38162 196 aa3.37□□□□□ -1.87
ABP140YOR239W DOG2P38773 246 aa3.37□□□□□ -1.87
ABP140YOR239W DOG1P38774 246 aa3.37□□□□□ -1.87
ABP140YOR239W YHR127WP38833 243 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W YER085CP40058 173 aa3.37□□□□□ -1.87
ABP140YOR239W FIS1P40515 155 aa3.37□□□□□ -1.87
ABP140YOR239W GTS1P40956 396 aa3.37□□□□□ -1.87
ABP140YOR239W OTU1P43558 301 aa3.37□□□□□ -1.87
ABP140YOR239W LYS5P50113 272 aa3.37□□□□□ -1.87
ABP140YOR239W BOL2P53082 120 aa3.37□□□□□ -1.87
ABP140YOR239W YGR283CP53336 341 aaPredicted RBP3.37□□□□□ -1.87
ABP140YOR239W BIO5P53744 561 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W HHT1P61830 136 aa3.37□□□□□ -1.87
ABP140YOR239W CAB5Q03941 241 aa3.37□□□□□ -1.87
ABP140YOR239W SDH7Q04401 133 aa3.37□□□□□ -1.87
ABP140YOR239W BLS1Q06071 122 aa3.37□□□□□ -1.87
ABP140YOR239W SUE1Q06524 206 aa3.37□□□□□ -1.87
ABP140YOR239W TPT1Q12272 230 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W LAS17Q12446 633 aa3.37□□□□□ -1.87
ABP140YOR239W TFB5Q3E7C1 72 aaPredicted RBP3.37□□□□□ -1.87
ABP140YOR239W Q0010Q9ZZX9 128 aa3.37□□□□□ -1.87
ABP140YOR239W TOM1Q03280 3268 aa3.37□□□□□ -1.87
ABP140YOR239W STT4P37297 1900 aa3.37□□□□□ -1.87
ABP140YOR239W SEC4P07560 215 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W YCR007CP25354 239 aa3.37□□□□□ -1.87
ABP140YOR239W CNE1P27825 502 aa3.37□□□□□ -1.87
ABP140YOR239W MRPL24P36525 258 aaPredicted RBP3.37□□□□□ -1.87
ABP140YOR239W YPT35P38815 214 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W PEX7P39108 375 aa3.37□□□□□ -1.87
ABP140YOR239W RPL13BP40212 199 aaKnown RBP3.37□□□□□ -1.87
ABP140YOR239W NIT1P40447 199 aa3.37□□□□□ -1.87
ABP140YOR239W PRM5P40476 318 aa3.37□□□□□ -1.87
ABP140YOR239W ATG27P46989 271 aa3.37□□□□□ -1.87
ABP140YOR239W COX18P53239 316 aa3.37□□□□□ -1.87
ABP140YOR239W PAU12P53343 120 aa3.37□□□□□ -1.87
ABP140YOR239W NSG2P53898 299 aa3.37□□□□□ -1.87
ABP140YOR239W ADD37Q03233 198 aa3.37□□□□□ -1.87
ABP140YOR239W YMR166CQ03829 368 aa3.37□□□□□ -1.87
ABP140YOR239W MTQ2Q03920 221 aaPredicted RBP3.37□□□□□ -1.87
ABP140YOR239W HLR1Q04429 423 aa3.37□□□□□ -1.87
ABP140YOR239W YML053CQ04978 212 aa3.37□□□□□ -1.87
ABP140YOR239W SEI1Q06058 285 aa3.37□□□□□ -1.87
ABP140YOR239W YPR114WQ06107 315 aa3.37□□□□□ -1.87
ABP140YOR239W DCI1Q08558 271 aa3.37□□□□□ -1.87
ABP140YOR239W YDL177CQ12257 170 aa3.37□□□□□ -1.87
ABP140YOR239W ERV2Q12284 196 aa3.37□□□□□ -1.87
ABP140YOR239W IZH2Q12442 317 aa3.37□□□□□ -1.87
ABP140YOR239W RAX2Q12465 1220 aa3.37□□□□□ -1.87
ABP140YOR239W PCL9Q12477 304 aa3.37□□□□□ -1.87
ABP140YOR239W CPA1P07258 411 aaKnown RBP3.36□□□□□ -1.87
ABP140YOR239W GPI12P23797 304 aa3.36□□□□□ -1.87
ABP140YOR239W MDH3P32419 343 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
ABP140YOR239W AIM26P32858 118 aa3.36□□□□□ -1.87
ABP140YOR239W THI80P35202 319 aa3.36□□□□□ -1.87
ABP140YOR239W PAU16P35994 123 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms