RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C NOC4Q06512 552 aaPredicted RBP7.88□□□□□ -1.15
SEC61YLR378C FEX2Q08991 375 aa7.88□□□□□ -1.15
SEC61YLR378C NCE102Q12207 173 aaRIP-Chip data7.88□□□□□ -1.15not detected
SEC61YLR378C RNH203Q12338 110 aa7.88□□□□□ -1.15
SEC61YLR378C IRA1P18963 3092 aa7.88□□□□□ -1.15
SEC61YLR378C OCH1P31755 480 aa7.87□□□□□ -1.15
SEC61YLR378C YIR035CP40579 254 aa7.87□□□□□ -1.15
SEC61YLR378C EGT2P42835 1041 aa7.87□□□□□ -1.15
SEC61YLR378C HNT2P49775 206 aa7.87□□□□□ -1.15
SEC61YLR378C UBC13P52490 153 aa7.87□□□□□ -1.15
SEC61YLR378C SLX9P53251 210 aaPredicted RBP7.87□□□□□ -1.15
SEC61YLR378C MEH1Q02205 184 aa7.87□□□□□ -1.15
SEC61YLR378C THI74Q04083 370 aa7.87□□□□□ -1.15
SEC61YLR378C YDR286CQ05530 114 aa7.87□□□□□ -1.15
SEC61YLR378C TFC7Q12415 435 aa7.87□□□□□ -1.15
SEC61YLR378C WHI5Q12416 295 aa7.87□□□□□ -1.15
SEC61YLR378C YLR365WQ7LIF2 110 aa7.87□□□□□ -1.15
SEC61YLR378C ATG40Q99325 256 aa7.87□□□□□ -1.15
SEC61YLR378C IPP1P00817 287 aaKnown RBP7.86□□□□□ -1.15
SEC61YLR378C TPI1P00942 248 aaKnown RBP7.86□□□□□ -1.15
SEC61YLR378C QCR2P07257 368 aa7.86□□□□□ -1.15
SEC61YLR378C SEN2P16658 377 aa7.86□□□□□ -1.15
SEC61YLR378C MAK32P23060 363 aa7.86□□□□□ -1.15
SEC61YLR378C LNP1P38878 278 aa7.86□□□□□ -1.15
SEC61YLR378C RPL13BP40212 199 aaKnown RBP7.86□□□□□ -1.15
SEC61YLR378C IRC24P40580 263 aa7.86□□□□□ -1.15
SEC61YLR378C RPA34P47006 233 aaPredicted RBP7.86□□□□□ -1.15
SEC61YLR378C SOL1P50278 321 aa7.86□□□□□ -1.15
SEC61YLR378C DID2P69771 204 aa7.86□□□□□ -1.15
SEC61YLR378C ANT1Q06497 328 aa7.86□□□□□ -1.15
SEC61YLR378C GRC3Q07845 632 aa7.86□□□□□ -1.15
SEC61YLR378C PRS5Q12265 496 aaKnown RBP7.86□□□□□ -1.15
SEC61YLR378C RPL13AQ12690 199 aaPredicted RBP7.86□□□□□ -1.15
SEC61YLR378C TAD2P47058 250 aa7.86□□□□□ -1.15
SEC61YLR378C TAF4P50105 388 aa7.86□□□□□ -1.15
SEC61YLR378C YPL067CQ02754 198 aa7.86□□□□□ -1.15
SEC61YLR378C UPS1Q05776 175 aa7.86□□□□□ -1.15
SEC61YLR378C AEP3Q12089 606 aa7.86□□□□□ -1.15
SEC61YLR378C FRE8Q12209 686 aa7.86□□□□□ -1.15
SEC61YLR378C ISN1Q99312 450 aa7.86□□□□□ -1.15
SEC61YLR378C FUS3P16892 353 aaKnown RBP7.85□□□□□ -1.15
SEC61YLR378C DBP2P24783 546 aaKnown RBP7.85□□□□□ -1.15
SEC61YLR378C TIP1P27654 210 aaPredicted RBP7.85□□□□□ -1.15
SEC61YLR378C IMP1P28627 190 aa7.85□□□□□ -1.15
SEC61YLR378C PDC2P32896 925 aa7.85□□□□□ -1.15
SEC61YLR378C NTC20P38302 140 aaPredicted RBP7.85□□□□□ -1.15
SEC61YLR378C GPI16P38875 610 aa7.85□□□□□ -1.15
SEC61YLR378C NRG1Q03125 231 aa7.85□□□□□ -1.15
SEC61YLR378C YCT1Q12235 531 aa7.85□□□□□ -1.15
SEC61YLR378C MPD1Q12404 318 aaKnown RBP7.85□□□□□ -1.15
SEC61YLR378C YJR112W-AQ3E743 109 aa7.85□□□□□ -1.15
SEC61YLR378C YBR085C-AO43137 85 aa7.84□□□□□ -1.15
SEC61YLR378C RPP1AP05318 106 aaPredicted RBP7.84□□□□□ -1.15
SEC61YLR378C RPB7P34087 171 aa7.84□□□□□ -1.15
SEC61YLR378C YUH1P35127 236 aa7.84□□□□□ -1.15
SEC61YLR378C SWD2P36104 329 aaPredicted RBP7.84□□□□□ -1.15
SEC61YLR378C SWD3P38123 315 aa7.84□□□□□ -1.15
SEC61YLR378C YBR220CP38318 560 aa7.84□□□□□ -1.15
SEC61YLR378C POP2P39008 433 aa7.84□□□□□ -1.15
SEC61YLR378C SSO2P39926 295 aa7.84□□□□□ -1.15
SEC61YLR378C YJR111CP47148 283 aaKnown RBP7.84□□□□□ -1.15
SEC61YLR378C SRB7P47822 140 aa7.84□□□□□ -1.15
SEC61YLR378C FCF2Q12035 217 aaPredicted RBP7.84□□□□□ -1.15
SEC61YLR378C FCY22Q12119 530 aa7.84□□□□□ -1.15
SEC61YLR378C YLR146W-AQ2V2P1 62 aa7.84□□□□□ -1.15
SEC61YLR378C SSA3P09435 649 aaKnown RBP7.83□□□□□ -1.16
SEC61YLR378C SEC22P22214 214 aa7.83□□□□□ -1.16
SEC61YLR378C YHL037CP38733 133 aa7.83□□□□□ -1.16
SEC61YLR378C UBC12P52491 188 aa7.83□□□□□ -1.16
SEC61YLR378C PNC1P53184 216 aaKnown RBP7.83□□□□□ -1.16
SEC61YLR378C ACT1P60010 375 aaKnown RBP7.83□□□□□ -1.16
SEC61YLR378C YOL029CQ08187 201 aa7.83□□□□□ -1.16
SEC61YLR378C YPR108W-AQ3E7B3 70 aa7.83□□□□□ -1.16
SEC61YLR378C PKP2P53170 491 aa7.82□□□□□ -1.16
SEC61YLR378C CRZ1P53968 678 aa7.82□□□□□ -1.16
SEC61YLR378C TIM44Q01852 431 aa7.82□□□□□ -1.16
SEC61YLR378C VPS28Q02767 242 aa7.82□□□□□ -1.16
SEC61YLR378C TSA2Q04120 196 aa7.82□□□□□ -1.16
SEC61YLR378C FIT1Q04433 528 aa7.82□□□□□ -1.16
SEC61YLR378C LIP2Q06005 328 aa7.82□□□□□ -1.16
SEC61YLR378C PRP11Q07350 266 aaPredicted RBP7.82□□□□□ -1.16
SEC61YLR378C RRT7Q07829 113 aa7.82□□□□□ -1.16
SEC61YLR378C OSH7P38755 437 aa7.81□□□□□ -1.16
SEC61YLR378C ASP1P38986 381 aaPredicted RBP7.81□□□□□ -1.16
SEC61YLR378C GCV3P39726 170 aaPredicted RBP7.81□□□□□ -1.16
SEC61YLR378C PAC2P39937 518 aa7.81□□□□□ -1.16
SEC61YLR378C PRM5P40476 318 aa7.81□□□□□ -1.16
SEC61YLR378C YFL051CP43552 160 aa7.81□□□□□ -1.16
SEC61YLR378C GPI15P53961 229 aa7.81□□□□□ -1.16
SEC61YLR378C YDL086WQ07505 273 aa7.81□□□□□ -1.16
SEC61YLR378C RPS23AP0CX29 145 aaKnown RBP7.8□□□□□ -1.16
SEC61YLR378C RPS23BP0CX30 145 aa7.8□□□□□ -1.16
SEC61YLR378C RPI1P23250 407 aaKnown RBP7.8□□□□□ -1.16
SEC61YLR378C VMA3P25515 160 aa7.8□□□□□ -1.16
SEC61YLR378C ERV15P38312 142 aa7.8□□□□□ -1.16
SEC61YLR378C LSM12P38828 187 aaKnown RBP7.8□□□□□ -1.16
SEC61YLR378C SLM1P40485 686 aa7.8□□□□□ -1.16
SEC61YLR378C YHC3P47040 408 aa7.8□□□□□ -1.16
SEC61YLR378C DPB4Q04603 196 aaKnown RBP7.8□□□□□ -1.16
SEC61YLR378C YML003WP0CF16 290 aa7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms