RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W NAT2P37293 288 aa8.46□□□□□ -1.06
SHH4YLR164W ECM14P38836 430 aa8.46□□□□□ -1.06
SHH4YLR164W YGR210CP42942 411 aa8.46□□□□□ -1.06
SHH4YLR164W MRX5P47007 382 aa8.46□□□□□ -1.06
SHH4YLR164W LSM1P47017 172 aaKnown RBP8.46□□□□□ -1.06
SHH4YLR164W PRM15Q03262 622 aa8.46□□□□□ -1.06
SHH4YLR164W COA4Q05809 96 aa8.46□□□□□ -1.06
SHH4YLR164W UBA3Q99344 299 aa8.46□□□□□ -1.06
SHH4YLR164W TRR1P29509 319 aaKnown RBP8.45□□□□□ -1.06
SHH4YLR164W PRS2P38620 318 aaKnown RBP8.45□□□□□ -1.06
SHH4YLR164W CCS1P40202 249 aaKnown RBP8.45□□□□□ -1.06
SHH4YLR164W GAT2P40209 560 aa8.45□□□□□ -1.06
SHH4YLR164W HNT2P49775 206 aa8.45□□□□□ -1.06
SHH4YLR164W NIF3P53081 288 aa8.45□□□□□ -1.06
SHH4YLR164W PEF1P53238 335 aa8.45□□□□□ -1.06
SHH4YLR164W GIM3P53900 129 aa8.45□□□□□ -1.06
SHH4YLR164W CAC2Q04199 468 aa8.45□□□□□ -1.06
SHH4YLR164W GRC3Q07845 632 aa8.45□□□□□ -1.06
SHH4YLR164W FCY22Q12119 530 aa8.45□□□□□ -1.06
SHH4YLR164W YOR029WQ12243 111 aa8.45□□□□□ -1.06
SHH4YLR164W GAL1P04385 528 aa8.44□□□□□ -1.06
SHH4YLR164W CTR2P38865 189 aa8.44□□□□□ -1.06
SHH4YLR164W LNP1P38878 278 aa8.44□□□□□ -1.06
SHH4YLR164W SMX3P54999 86 aaPredicted RBP8.44□□□□□ -1.06
SHH4YLR164W THI74Q04083 370 aa8.44□□□□□ -1.06
SHH4YLR164W RTT103Q05543 409 aa8.44□□□□□ -1.06
SHH4YLR164W SCP1Q08873 200 aa8.44□□□□□ -1.06
SHH4YLR164W ALG6Q12001 544 aaKnown RBP8.44□□□□□ -1.06
SHH4YLR164W TPI1P00942 248 aaKnown RBP8.43□□□□□ -1.06
SHH4YLR164W YCR101CP25607 182 aa8.43□□□□□ -1.06
SHH4YLR164W ACB1P31787 87 aa8.43□□□□□ -1.06
SHH4YLR164W SPC29P33419 253 aa8.43□□□□□ -1.06
SHH4YLR164W YKL107WP34251 309 aa8.43□□□□□ -1.06
SHH4YLR164W PRS3P38689 320 aaKnown RBP8.43□□□□□ -1.06
SHH4YLR164W COS8P38723 381 aa8.43□□□□□ -1.06
SHH4YLR164W SLX9P53251 210 aaPredicted RBP8.43□□□□□ -1.06
SHH4YLR164W PLP1Q04004 230 aa8.43□□□□□ -1.06
SHH4YLR164W TSA2Q04120 196 aa8.43□□□□□ -1.06
SHH4YLR164W YMR254CQ04838 102 aa8.43□□□□□ -1.06
SHH4YLR164W YLR224WQ05947 369 aa8.43□□□□□ -1.06
SHH4YLR164W YGL194C-AQ2V2P6 80 aa8.43□□□□□ -1.06
SHH4YLR164W YLR365WQ7LIF2 110 aa8.43□□□□□ -1.06
SHH4YLR164W SPS4P09937 338 aa8.42□□□□□ -1.06
SHH4YLR164W VMA3P25515 160 aa8.42□□□□□ -1.06
SHH4YLR164W SUA5P32579 426 aa8.42□□□□□ -1.06
SHH4YLR164W BFR1P38934 470 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
SHH4YLR164W POP2P39008 433 aa8.42□□□□□ -1.06
SHH4YLR164W SLM1P40485 686 aa8.42□□□□□ -1.06
SHH4YLR164W GLR1P41921 483 aaKnown RBP8.42□□□□□ -1.06
SHH4YLR164W QRI1P43123 477 aaKnown RBP8.42□□□□□ -1.06
SHH4YLR164W CAB5Q03941 241 aa8.42□□□□□ -1.06
SHH4YLR164W SNA4Q07549 140 aa8.42□□□□□ -1.06
SHH4YLR164W MED4Q12343 284 aa8.42□□□□□ -1.06
SHH4YLR164W YPR108W-AQ3E7B3 70 aa8.42□□□□□ -1.06
SHH4YLR164W YBR298C-AQ8TGK4 73 aa8.42□□□□□ -1.06
SHH4YLR164W ATG40Q99325 256 aa8.42□□□□□ -1.06
SHH4YLR164W MRS4P23500 304 aa8.41□□□□□ -1.06
SHH4YLR164W MNS1P32906 549 aa8.41□□□□□ -1.06
SHH4YLR164W BNA2P47125 453 aa8.41□□□□□ -1.06
SHH4YLR164W SOL1P50278 321 aa8.41□□□□□ -1.06
SHH4YLR164W MRPL22P53881 309 aa8.41□□□□□ -1.06
SHH4YLR164W YDR415CQ04033 374 aaPredicted RBP8.41□□□□□ -1.06
SHH4YLR164W FIT1Q04433 528 aa8.41□□□□□ -1.06
SHH4YLR164W YDR286CQ05530 114 aa8.41□□□□□ -1.06
SHH4YLR164W UPS1Q05776 175 aa8.41□□□□□ -1.06
SHH4YLR164W YDL086WQ07505 273 aa8.41□□□□□ -1.06
SHH4YLR164W TMC1Q08422 150 aaPredicted RBP8.41□□□□□ -1.06
SHH4YLR164W CKA1P15790 372 aa8.4□□□□□ -1.06
SHH4YLR164W SEC22P22214 214 aa8.4□□□□□ -1.06
SHH4YLR164W YCR061WP25639 631 aa8.4□□□□□ -1.06
SHH4YLR164W TIP1P27654 210 aaPredicted RBP8.4□□□□□ -1.06
SHH4YLR164W NTC20P38302 140 aaPredicted RBP8.4□□□□□ -1.06
SHH4YLR164W GEP4P38812 185 aa8.4□□□□□ -1.06
SHH4YLR164W ASM4Q05166 528 aa8.4□□□□□ -1.06
SHH4YLR164W WHI5Q12416 295 aa8.4□□□□□ -1.06
SHH4YLR164W YJR112W-AQ3E743 109 aa8.4□□□□□ -1.06
SHH4YLR164W YBL029C-AQ3E756 94 aa8.4□□□□□ -1.06
SHH4YLR164W HUG1Q6Q5K6 68 aa8.4□□□□□ -1.06
SHH4YLR164W YMR105W-AQ8TGS8 64 aa8.4□□□□□ -1.06
SHH4YLR164W YML003WP0CF16 290 aa8.39□□□□□ -1.07
SHH4YLR164W YGL262WP53054 175 aa8.39□□□□□ -1.07
SHH4YLR164W TEX1P53851 422 aaKnown RBP8.39□□□□□ -1.07
SHH4YLR164W HSK3P69852 69 aa8.39□□□□□ -1.07
SHH4YLR164W SWT1Q12104 458 aa8.39□□□□□ -1.07
SHH4YLR164W TFB5Q3E7C1 72 aaPredicted RBP8.39□□□□□ -1.07
SHH4YLR164W QCR2P07257 368 aa8.38□□□□□ -1.07
SHH4YLR164W ERG2P32352 222 aa8.38□□□□□ -1.07
SHH4YLR164W PAC2P39937 518 aa8.38□□□□□ -1.07
SHH4YLR164W YER121WP40076 114 aa8.38□□□□□ -1.07
SHH4YLR164W YIR035CP40579 254 aa8.38□□□□□ -1.07
SHH4YLR164W YFL015CP43578 164 aa8.38□□□□□ -1.07
SHH4YLR164W PIR5P46999 287 aa8.38□□□□□ -1.07
SHH4YLR164W YJR111CP47148 283 aaKnown RBP8.38□□□□□ -1.07
SHH4YLR164W MRPL50P53724 139 aa8.38□□□□□ -1.07
SHH4YLR164W CWC25P53854 179 aaKnown RBP8.38□□□□□ -1.07
SHH4YLR164W YPL067CQ02754 198 aa8.38□□□□□ -1.07
SHH4YLR164W RIM9Q04734 239 aa8.38□□□□□ -1.07
SHH4YLR164W RFM1Q12192 310 aa8.38□□□□□ -1.07
SHH4YLR164W VAM3Q12241 283 aa8.38□□□□□ -1.07
SHH4YLR164W TFC7Q12415 435 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms