RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C YER137CP40083 148 aaKnown RBP8.42□□□□□ -1.06
POM34YLR018C YGR210CP42942 411 aa8.42□□□□□ -1.06
POM34YLR018C PLP1Q04004 230 aa8.42□□□□□ -1.06
POM34YLR018C GRC3Q07845 632 aa8.42□□□□□ -1.06
POM34YLR018C MED4Q12343 284 aa8.42□□□□□ -1.06
POM34YLR018C WHI5Q12416 295 aa8.42□□□□□ -1.06
POM34YLR018C MEC1P38111 2368 aa8.41□□□□□ -1.06
POM34YLR018C RPL39P04650 51 aa8.41□□□□□ -1.06
POM34YLR018C SPC29P33419 253 aa8.41□□□□□ -1.06
POM34YLR018C SHM2P37291 469 aaKnown RBP8.41□□□□□ -1.06
POM34YLR018C RMD6P39975 231 aa8.41□□□□□ -1.06
POM34YLR018C HNT2P49775 206 aa8.41□□□□□ -1.06
POM34YLR018C UBP8P50102 471 aa8.41□□□□□ -1.06
POM34YLR018C CAB5Q03941 241 aa8.41□□□□□ -1.06
POM34YLR018C RTT103Q05543 409 aa8.41□□□□□ -1.06
POM34YLR018C YOR192C-CQ3E736 78 aa8.41□□□□□ -1.06
POM34YLR018C TFB5Q3E7C1 72 aaPredicted RBP8.41□□□□□ -1.06
POM34YLR018C TRA1P38811 3744 aa8.4□□□□□ -1.06
POM34YLR018C GAL1P04385 528 aa8.4□□□□□ -1.06
POM34YLR018C YML003WP0CF16 290 aa8.4□□□□□ -1.06
POM34YLR018C CKA1P15790 372 aa8.4□□□□□ -1.06
POM34YLR018C TRR1P29509 319 aaKnown RBP8.4□□□□□ -1.06
POM34YLR018C YKL187CP34231 750 aa8.4□□□□□ -1.06
POM34YLR018C QRI1P43123 477 aaKnown RBP8.4□□□□□ -1.06
POM34YLR018C RPS0BP46654 252 aaKnown RBP8.4□□□□□ -1.06
POM34YLR018C GON7P46984 123 aa8.4□□□□□ -1.06
POM34YLR018C SOL1P50278 321 aa8.4□□□□□ -1.06
POM34YLR018C MRPL50P53724 139 aa8.4□□□□□ -1.06
POM34YLR018C SMX3P54999 86 aaPredicted RBP8.4□□□□□ -1.06
POM34YLR018C YPL067CQ02754 198 aa8.4□□□□□ -1.06
POM34YLR018C CAC2Q04199 468 aa8.4□□□□□ -1.06
POM34YLR018C FEX1Q08913 375 aa8.4□□□□□ -1.06
POM34YLR018C PRM4Q12498 284 aa8.4□□□□□ -1.06
POM34YLR018C YLR365WQ7LIF2 110 aa8.4□□□□□ -1.06
POM34YLR018C PUT1P09368 476 aa8.39□□□□□ -1.07
POM34YLR018C OLE1P21147 510 aaKnown RBP8.39□□□□□ -1.07
POM34YLR018C ACB1P31787 87 aa8.39□□□□□ -1.07
POM34YLR018C SUA5P32579 426 aa8.39□□□□□ -1.07
POM34YLR018C RPB7P34087 171 aa8.39□□□□□ -1.07
POM34YLR018C SWD2P36104 329 aaPredicted RBP8.39□□□□□ -1.07
POM34YLR018C NTC20P38302 140 aaPredicted RBP8.39□□□□□ -1.07
POM34YLR018C BFR1P38934 470 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07 RIP-Chip
POM34YLR018C YER121WP40076 114 aa8.39□□□□□ -1.07
POM34YLR018C BNA2P47125 453 aa8.39□□□□□ -1.07
POM34YLR018C TSA2Q04120 196 aa8.39□□□□□ -1.07
POM34YLR018C UPS1Q05776 175 aa8.39□□□□□ -1.07
POM34YLR018C VAM3Q12241 283 aa8.39□□□□□ -1.07
POM34YLR018C CKS1P20486 150 aaKnown RBP8.38□□□□□ -1.07
POM34YLR018C MIR1P23641 311 aaKnown RBP8.38□□□□□ -1.07
POM34YLR018C MNS1P32906 549 aa8.38□□□□□ -1.07
POM34YLR018C GLY1P37303 387 aaKnown RBP8.38□□□□□ -1.07
POM34YLR018C GAT2P40209 560 aa8.38□□□□□ -1.07
POM34YLR018C SLM1P40485 686 aa8.38□□□□□ -1.07
POM34YLR018C NIF3P53081 288 aa8.38□□□□□ -1.07
POM34YLR018C THI74Q04083 370 aa8.38□□□□□ -1.07
POM34YLR018C FIT1Q04433 528 aa8.38□□□□□ -1.07
POM34YLR018C YDR286CQ05530 114 aa8.38□□□□□ -1.07
POM34YLR018C YLR224WQ05947 369 aa8.38□□□□□ -1.07
POM34YLR018C YOL118CQ08259 102 aa8.38□□□□□ -1.07
POM34YLR018C TPI1P00942 248 aaKnown RBP8.37□□□□□ -1.07
POM34YLR018C CTR2P38865 189 aa8.37□□□□□ -1.07
POM34YLR018C AIM46P38885 310 aa8.37□□□□□ -1.07
POM34YLR018C TIM10P87108 93 aa8.37□□□□□ -1.07
POM34YLR018C LIP2Q06005 328 aa8.37□□□□□ -1.07
POM34YLR018C BBP1Q12365 385 aa8.37□□□□□ -1.07
POM34YLR018C FUS3P16892 353 aaKnown RBP8.36□□□□□ -1.07
POM34YLR018C STF2P16965 84 aa8.36□□□□□ -1.07
POM34YLR018C VMA3P25515 160 aa8.36□□□□□ -1.07
POM34YLR018C VMA8P32610 256 aaKnown RBP8.36□□□□□ -1.07
POM34YLR018C LAG1P38703 411 aa8.36□□□□□ -1.07
POM34YLR018C OSH7P38755 437 aa8.36□□□□□ -1.07
POM34YLR018C POP2P39008 433 aa8.36□□□□□ -1.07
POM34YLR018C PAC2P39937 518 aa8.36□□□□□ -1.07
POM34YLR018C BMT5P40493 336 aa8.36□□□□□ -1.07
POM34YLR018C MEH1Q02205 184 aa8.36□□□□□ -1.07
POM34YLR018C COA4Q05809 96 aa8.36□□□□□ -1.07
POM34YLR018C RFM1Q12192 310 aa8.36□□□□□ -1.07
POM34YLR018C YCR061WP25639 631 aa8.35□□□□□ -1.07
POM34YLR018C YIR035CP40579 254 aa8.35□□□□□ -1.07
POM34YLR018C RPA34P47006 233 aaPredicted RBP8.35□□□□□ -1.07
POM34YLR018C YNL046WP53956 172 aa8.35□□□□□ -1.07
POM34YLR018C HSK3P69852 69 aa8.35□□□□□ -1.07
POM34YLR018C RIM9Q04734 239 aa8.35□□□□□ -1.07
POM34YLR018C PML1Q07930 204 aaPredicted RBP8.35□□□□□ -1.07
POM34YLR018C YNG1Q08465 219 aa8.35□□□□□ -1.07
POM34YLR018C YGL194C-AQ2V2P6 80 aa8.35□□□□□ -1.07
POM34YLR018C YPR108W-AQ3E7B3 70 aa8.35□□□□□ -1.07
POM34YLR018C QCR2P07257 368 aa8.34□□□□□ -1.07
POM34YLR018C TIP1P27654 210 aaPredicted RBP8.34□□□□□ -1.07
POM34YLR018C MRP20P32387 263 aa8.34□□□□□ -1.07
POM34YLR018C YUH1P35127 236 aa8.34□□□□□ -1.07
POM34YLR018C GLR1P41921 483 aaKnown RBP8.34□□□□□ -1.07
POM34YLR018C ECM27P47144 725 aa8.34□□□□□ -1.07
POM34YLR018C PEF1P53238 335 aa8.34□□□□□ -1.07
POM34YLR018C TEX1P53851 422 aaKnown RBP8.34□□□□□ -1.07
POM34YLR018C GMC1Q04399 608 aa8.34□□□□□ -1.07
POM34YLR018C DPB4Q04603 196 aaKnown RBP8.34□□□□□ -1.07
POM34YLR018C TMC1Q08422 150 aaPredicted RBP8.34□□□□□ -1.07
POM34YLR018C SWT1Q12104 458 aa8.34□□□□□ -1.07
POM34YLR018C YJR112W-AQ3E743 109 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 133.5 ms