RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C BMT5P40493 336 aa1.27□□□□□ -2.21
CMS1YLR003C RPA43P46669 326 aa1.27□□□□□ -2.21
CMS1YLR003C DAD3P69850 94 aa1.27□□□□□ -2.21
CMS1YLR003C NEJ1Q06148 342 aa1.27□□□□□ -2.21
CMS1YLR003C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
CMS1YLR003C YPL229WQ99395 206 aa1.27□□□□□ -2.21
CMS1YLR003C CDC8P00572 216 aa1.26□□□□□ -2.21
CMS1YLR003C RPL28P02406 149 aaKnown RBP1.26□□□□□ -2.21
CMS1YLR003C RPL24BP24000 155 aaKnown RBP1.26□□□□□ -2.21
CMS1YLR003C TCD1P38756 429 aa1.26□□□□□ -2.21
CMS1YLR003C YHR180WP38868 163 aa1.26□□□□□ -2.21
CMS1YLR003C YER085CP40058 173 aa1.26□□□□□ -2.21
CMS1YLR003C PEP8P40335 379 aa1.26□□□□□ -2.21
CMS1YLR003C MCM22P47167 239 aa1.26□□□□□ -2.21
CMS1YLR003C ABF2Q02486 183 aa1.26□□□□□ -2.21
CMS1YLR003C CDC123Q05791 360 aa1.26□□□□□ -2.21
CMS1YLR003C YLR283WQ05867 314 aa1.26□□□□□ -2.21
CMS1YLR003C YHR139C-AO13536 103 aa1.25□□□□□ -2.21
CMS1YLR003C THP2O13539 261 aaKnown RBP1.25□□□□□ -2.21
CMS1YLR003C BCY1P07278 416 aaKnown RBP1.25□□□□□ -2.21
CMS1YLR003C URA6P15700 204 aa1.25□□□□□ -2.21
CMS1YLR003C GRX2P17695 143 aaKnown RBP1.25□□□□□ -2.21
CMS1YLR003C RPO26P20435 155 aa1.25□□□□□ -2.21
CMS1YLR003C VMA6P32366 345 aaKnown RBP1.25□□□□□ -2.21
CMS1YLR003C SSO1P32867 290 aa1.25□□□□□ -2.21
CMS1YLR003C NTF2P33331 125 aaKnown RBP1.25□□□□□ -2.21
CMS1YLR003C YHR022CP38763 256 aa1.25□□□□□ -2.21
CMS1YLR003C DOG2P38773 246 aa1.25□□□□□ -2.21
CMS1YLR003C DOG1P38774 246 aa1.25□□□□□ -2.21
CMS1YLR003C RTR1P40084 226 aaPredicted RBP1.25□□□□□ -2.21
CMS1YLR003C YJR149WP47177 404 aa1.25□□□□□ -2.21
CMS1YLR003C ALG13P53178 202 aa1.25□□□□□ -2.21
CMS1YLR003C CDC28P00546 298 aaKnown RBP1.24□□□□□ -2.21
CMS1YLR003C YMR31P19955 123 aa1.24□□□□□ -2.21
CMS1YLR003C ATG22P25568 528 aa1.24□□□□□ -2.21
CMS1YLR003C AYR1P40471 297 aa1.24□□□□□ -2.21
CMS1YLR003C AGE2P40529 298 aa1.24□□□□□ -2.21
CMS1YLR003C YKE4P40544 346 aa1.24□□□□□ -2.21
CMS1YLR003C RPL33BP41056 107 aaKnown RBP1.24□□□□□ -2.21
CMS1YLR003C RPC17P47076 161 aa1.24□□□□□ -2.21
CMS1YLR003C AIF1P52923 378 aa1.24□□□□□ -2.21
CMS1YLR003C TOS8P53147 276 aa1.24□□□□□ -2.21
CMS1YLR003C FYV6P53913 173 aa1.24□□□□□ -2.21
CMS1YLR003C SNZ1Q03148 297 aa1.24□□□□□ -2.21
CMS1YLR003C YML108WQ03759 105 aa1.24□□□□□ -2.21
CMS1YLR003C ARR2Q06597 130 aa1.24□□□□□ -2.21
CMS1YLR003C DBF2P22204 572 aa1.23□□□□□ -2.21
CMS1YLR003C DSE2P38844 325 aa1.23□□□□□ -2.21
CMS1YLR003C PRE6P40303 254 aaKnown RBP1.23□□□□□ -2.21
CMS1YLR003C BXI1P48558 297 aa1.23□□□□□ -2.21
CMS1YLR003C YNR062CP53748 327 aa1.23□□□□□ -2.21
CMS1YLR003C GAS3Q03655 524 aa1.23□□□□□ -2.21
CMS1YLR003C LPP1Q04396 274 aa1.23□□□□□ -2.21
CMS1YLR003C SPG3Q04398 127 aaPredicted RBP1.23□□□□□ -2.21
CMS1YLR003C USB1Q12208 290 aaKnown RBP1.23□□□□□ -2.21
CMS1YLR003C LSO2Q3E772 92 aaKnown RBP1.23□□□□□ -2.21
CMS1YLR003C FLO9P39712 1322 aa1.22□□□□□ -2.21
CMS1YLR003C NHP6BP11633 99 aaKnown RBP1.22□□□□□ -2.21
CMS1YLR003C PET9P18239 318 aaKnown RBP1.22□□□□□ -2.21
CMS1YLR003C MRPS28P21771 286 aa1.22□□□□□ -2.21
CMS1YLR003C MDH2P22133 377 aa1.22□□□□□ -2.21
CMS1YLR003C PGD1P40356 397 aa1.22□□□□□ -2.21
CMS1YLR003C YDR248CQ03786 193 aa1.22□□□□□ -2.21
CMS1YLR003C TRM12Q04235 462 aa1.22□□□□□ -2.21
CMS1YLR003C TPO4Q12256 659 aa1.22□□□□□ -2.21
CMS1YLR003C UBR2Q07963 1872 aa1.21□□□□□ -2.22
CMS1YLR003C SRY1P36007 326 aa1.21□□□□□ -2.22
CMS1YLR003C CBT1P36038 271 aaPredicted RBP1.21□□□□□ -2.22
CMS1YLR003C YKR045CP36138 183 aa1.21□□□□□ -2.22
CMS1YLR003C SKG1P36169 355 aa1.21□□□□□ -2.22
CMS1YLR003C YBR219CP38317 127 aa1.21□□□□□ -2.22
CMS1YLR003C YNL194CP40169 301 aa1.21□□□□□ -2.22
CMS1YLR003C ADO1P47143 340 aaKnown RBP1.21□□□□□ -2.22
CMS1YLR003C MIC26P50087 233 aa1.21□□□□□ -2.22
CMS1YLR003C PRM8P53174 237 aa1.21□□□□□ -2.22
CMS1YLR003C JLP1Q12358 412 aa1.21□□□□□ -2.22
CMS1YLR003C TDA8Q6B2U8 126 aa1.21□□□□□ -2.22
CMS1YLR003C MET5P47169 1442 aa1.21□□□□□ -2.22
CMS1YLR003C TUS1Q06412 1307 aa1.2□□□□□ -2.22
CMS1YLR003C SPT3P06844 337 aa1.2□□□□□ -2.22
CMS1YLR003C YBR121C-AP0C5L4 52 aa1.2□□□□□ -2.22
CMS1YLR003C YLR156WP0CE96 114 aa1.2□□□□□ -2.22
CMS1YLR003C YLR159WP0CE97 114 aa1.2□□□□□ -2.22
CMS1YLR003C YLR161WP0CE98 114 aa1.2□□□□□ -2.22
CMS1YLR003C YOL162WP0CF19 215 aa1.2□□□□□ -2.22
CMS1YLR003C DDI2P0CH63 225 aa1.2□□□□□ -2.22
CMS1YLR003C DDI3P0CH64 225 aa1.2□□□□□ -2.22
CMS1YLR003C STE18P18852 110 aa1.2□□□□□ -2.22
CMS1YLR003C POP4P38336 279 aa1.2□□□□□ -2.22
CMS1YLR003C URA8P38627 578 aaPredicted RBP1.2□□□□□ -2.22
CMS1YLR003C RTC3P38804 111 aaPredicted RBP1.2□□□□□ -2.22
CMS1YLR003C AST2P39945 430 aaKnown RBP1.2□□□□□ -2.22
CMS1YLR003C RMD6P39975 231 aa1.2□□□□□ -2.22
CMS1YLR003C IRC22P40006 225 aa1.2□□□□□ -2.22
CMS1YLR003C ERG28P40030 148 aa1.2□□□□□ -2.22
CMS1YLR003C OTU1P43558 301 aa1.2□□□□□ -2.22
CMS1YLR003C NUP57P48837 541 aa1.2□□□□□ -2.22
CMS1YLR003C BRR6P53062 197 aa1.2□□□□□ -2.22
CMS1YLR003C DCN1Q12395 269 aa1.2□□□□□ -2.22
CMS1YLR003C PSF1Q12488 208 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms