RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W RIB7P33312 244 aa1.09□□□□□ -2.23
VMA21YGR105W TIR3P40552 269 aa1.09□□□□□ -2.23
VMA21YGR105W ILM1P47155 203 aa1.09□□□□□ -2.23
VMA21YGR105W SPG3Q04398 127 aaPredicted RBP1.09□□□□□ -2.23
VMA21YGR105W YML096WQ04489 525 aa1.09□□□□□ -2.23
VMA21YGR105W KAP95Q06142 861 aaKnown RBP1.09□□□□□ -2.23
VMA21YGR105W MEI4P29467 408 aa1.08□□□□□ -2.24
VMA21YGR105W RIB1P38066 345 aa1.08□□□□□ -2.24
VMA21YGR105W BOL2P53082 120 aa1.08□□□□□ -2.24
VMA21YGR105W TRM12Q04235 462 aa1.08□□□□□ -2.24
VMA21YGR105W SSQ1Q05931 657 aaPredicted RBP1.08□□□□□ -2.24
VMA21YGR105W HOC1P47124 396 aa1.07□□□□□ -2.24
VMA21YGR105W QCR8P08525 94 aa1.06□□□□□ -2.24
VMA21YGR105W RPL27BP0C2H7 136 aaKnown RBP1.06□□□□□ -2.24
VMA21YGR105W GPA2P10823 449 aa1.06□□□□□ -2.24
VMA21YGR105W FZF1P32805 299 aa1.06□□□□□ -2.24
VMA21YGR105W RPT5P33297 434 aaKnown RBP1.06□□□□□ -2.24
VMA21YGR105W PGD1P40356 397 aa1.06□□□□□ -2.24
VMA21YGR105W ICE2P40499 491 aa1.06□□□□□ -2.24
VMA21YGR105W YRB2P40517 327 aa1.06□□□□□ -2.24
VMA21YGR105W RIO1Q12196 484 aaKnown RBP1.06□□□□□ -2.24
VMA21YGR105W RRP36Q12481 300 aaPredicted RBP1.06□□□□□ -2.24
VMA21YGR105W PSF1Q12488 208 aa1.06□□□□□ -2.24
VMA21YGR105W YPR170W-BP0C5R9 85 aa1.05□□□□□ -2.24
VMA21YGR105W VPS21P36017 210 aaKnown RBP1.05□□□□□ -2.24
VMA21YGR105W YNL217WP40152 326 aa1.05□□□□□ -2.24
VMA21YGR105W RSM25P40496 264 aa1.05□□□□□ -2.24
VMA21YGR105W BNA6P43619 295 aa1.05□□□□□ -2.24
VMA21YGR105W GPI8P49018 411 aa1.05□□□□□ -2.24
VMA21YGR105W NUP57P48837 541 aa1.04□□□□□ -2.24
VMA21YGR105W AIF1P52923 378 aa1.04□□□□□ -2.24
VMA21YGR105W ABF2Q02486 183 aa1.04□□□□□ -2.24
VMA21YGR105W TCD1P38756 429 aa1.03□□□□□ -2.24
VMA21YGR105W PEX17P40155 199 aa1.03□□□□□ -2.24
VMA21YGR105W YJR149WP47177 404 aa1.03□□□□□ -2.24
VMA21YGR105W YNL134CP53912 376 aaKnown RBP1.03□□□□□ -2.24
VMA21YGR105W PAM18Q07914 168 aa1.03□□□□□ -2.24
VMA21YGR105W RRT8Q08219 342 aa1.03□□□□□ -2.24
VMA21YGR105W ATG31Q12421 196 aa1.03□□□□□ -2.24
VMA21YGR105W GAA1P39012 614 aa1.02□□□□□ -2.25
VMA21YGR105W TRM9P49957 279 aa1.02□□□□□ -2.25
VMA21YGR105W YNR077CP53758 84 aa1.02□□□□□ -2.25
VMA21YGR105W YNL010WP53981 241 aaKnown RBP1.02□□□□□ -2.25
VMA21YGR105W YMD8Q03697 442 aa1.02□□□□□ -2.25
VMA21YGR105W CPA1P07258 411 aaKnown RBP1.01□□□□□ -2.25
VMA21YGR105W YUH1P35127 236 aa1.01□□□□□ -2.25
VMA21YGR105W URA8P38627 578 aaPredicted RBP1.01□□□□□ -2.25
VMA21YGR105W IRC22P40006 225 aa1.01□□□□□ -2.25
VMA21YGR105W MRPL50P53724 139 aa1.01□□□□□ -2.25
VMA21YGR105W PDR18P53756 1333 aa1□□□□□ -2.25
VMA21YGR105W REP2P03872 296 aa1□□□□□ -2.25
VMA21YGR105W SRB4P32569 687 aa1□□□□□ -2.25
VMA21YGR105W TMA19P35691 167 aaKnown RBP1□□□□□ -2.25
VMA21YGR105W MCM22P47167 239 aa1□□□□□ -2.25
VMA21YGR105W DOC1P53068 250 aa1□□□□□ -2.25
VMA21YGR105W MPA43P53583 542 aaPredicted RBP1□□□□□ -2.25
VMA21YGR105W YLR173WQ06247 608 aa1□□□□□ -2.25
VMA21YGR105W MET5P47169 1442 aa0.99□□□□□ -2.25
VMA21YGR105W MRPS28P21771 286 aa0.99□□□□□ -2.25
VMA21YGR105W DOG2P38773 246 aa0.99□□□□□ -2.25
VMA21YGR105W LPP1Q04396 274 aa0.99□□□□□ -2.25
VMA21YGR105W KRE28Q04431 385 aa0.99□□□□□ -2.25
VMA21YGR105W ANT1Q06497 328 aa0.99□□□□□ -2.25
VMA21YGR105W YPL162CQ12042 273 aa0.99□□□□□ -2.25
VMA21YGR105W VAR1P02381 398 aa0.98□□□□□ -2.25
VMA21YGR105W YLR156WP0CE96 114 aa0.98□□□□□ -2.25
VMA21YGR105W YLR159WP0CE97 114 aa0.98□□□□□ -2.25
VMA21YGR105W YLR161WP0CE98 114 aa0.98□□□□□ -2.25
VMA21YGR105W MRPL25P23369 157 aa0.98□□□□□ -2.25
VMA21YGR105W LDB7P38210 180 aa0.98□□□□□ -2.25
VMA21YGR105W CUE1P38428 203 aa0.98□□□□□ -2.25
VMA21YGR105W NSA1P53136 463 aaPredicted RBP0.98□□□□□ -2.25
VMA21YGR105W UBC7Q02159 165 aa0.98□□□□□ -2.25
VMA21YGR105W SNZ1Q03148 297 aa0.98□□□□□ -2.25
VMA21YGR105W ATG22P25568 528 aa0.97□□□□□ -2.25
VMA21YGR105W NTF2P33331 125 aaKnown RBP0.97□□□□□ -2.25
VMA21YGR105W YET1P35723 206 aa0.97□□□□□ -2.25
VMA21YGR105W YER076CP40049 302 aa0.97□□□□□ -2.25
VMA21YGR105W SAY1P53324 424 aa0.97□□□□□ -2.25
VMA21YGR105W DID2P69771 204 aa0.97□□□□□ -2.25
VMA21YGR105W MSB2P32334 1306 aa0.96□□□□□ -2.26
VMA21YGR105W RPO26P20435 155 aa0.96□□□□□ -2.26
VMA21YGR105W CDC10P25342 322 aaKnown RBP0.96□□□□□ -2.26
VMA21YGR105W POP4P38336 279 aa0.96□□□□□ -2.26
VMA21YGR105W RPL37AP49166 88 aaKnown RBP0.96□□□□□ -2.26
VMA21YGR105W DRS2P39524 1355 aa0.96□□□□□ -2.26
VMA21YGR105W BCY1P07278 416 aaKnown RBP0.95□□□□□ -2.26
VMA21YGR105W UMP1P38293 148 aa0.95□□□□□ -2.26
VMA21YGR105W ERJ5P43613 295 aaPredicted RBP0.95□□□□□ -2.26
VMA21YGR105W YML108WQ03759 105 aa0.95□□□□□ -2.26
VMA21YGR105W LSO2Q3E772 92 aaKnown RBP0.95□□□□□ -2.26
VMA21YGR105W TUS1Q06412 1307 aa0.94□□□□□ -2.26
VMA21YGR105W SRY1P36007 326 aa0.94□□□□□ -2.26
VMA21YGR105W MRPL28P36527 147 aa0.94□□□□□ -2.26
VMA21YGR105W MRPL17P36528 281 aa0.94□□□□□ -2.26
VMA21YGR105W EAF6P47128 113 aa0.94□□□□□ -2.26
VMA21YGR105W NUP84P52891 726 aa0.94□□□□□ -2.26
VMA21YGR105W POP3P53833 195 aaPredicted RBP0.94□□□□□ -2.26
VMA21YGR105W NOP13P53883 403 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
VMA21YGR105W SWP1Q02795 286 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 138.8 ms