RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C SPT3P06844 337 aa1.76□□□□□ -2.13
PRP38YGR075C BCY1P07278 416 aaKnown RBP1.76□□□□□ -2.13
PRP38YGR075C VMA6P32366 345 aaKnown RBP1.76□□□□□ -2.13
PRP38YGR075C COS8P38723 381 aa1.76□□□□□ -2.13
PRP38YGR075C TCD1P38756 429 aa1.76□□□□□ -2.13
PRP38YGR075C COX15P40086 486 aa1.76□□□□□ -2.13
PRP38YGR075C YMR144WP40214 342 aaKnown RBP1.76□□□□□ -2.13
PRP38YGR075C MCM22P47167 239 aa1.76□□□□□ -2.13
PRP38YGR075C GRH1Q04410 372 aaKnown RBP1.76□□□□□ -2.13
PRP38YGR075C DCR2Q05924 578 aa1.76□□□□□ -2.13
PRP38YGR075C YPR172WQ06608 200 aa1.76□□□□□ -2.13
PRP38YGR075C YLR030WQ07967 263 aa1.76□□□□□ -2.13
PRP38YGR075C SEY1Q99287 776 aa1.76□□□□□ -2.13
PRP38YGR075C TOP2P06786 1428 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C THP2O13539 261 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C CDC10P25342 322 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C CLB6P32943 380 aa1.75□□□□□ -2.13
PRP38YGR075C MSA2P36157 363 aa1.75□□□□□ -2.13
PRP38YGR075C URA8P38627 578 aaPredicted RBP1.75□□□□□ -2.13
PRP38YGR075C RTC3P38804 111 aaPredicted RBP1.75□□□□□ -2.13
PRP38YGR075C PRE6P40303 254 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C MRPL49P40858 161 aaPredicted RBP1.75□□□□□ -2.13
PRP38YGR075C YJR146WP47174 117 aa1.75□□□□□ -2.13
PRP38YGR075C MIC26P50087 233 aa1.75□□□□□ -2.13
PRP38YGR075C YGL159WP53110 370 aa1.75□□□□□ -2.13
PRP38YGR075C TOS8P53147 276 aa1.75□□□□□ -2.13
PRP38YGR075C INM2Q05533 292 aa1.75□□□□□ -2.13
PRP38YGR075C VPS68Q12016 184 aa1.75□□□□□ -2.13
PRP38YGR075C BBP1Q12365 385 aa1.75□□□□□ -2.13
PRP38YGR075C SAS5Q99314 248 aa1.75□□□□□ -2.13
PRP38YGR075C HAP1P0CE41 1502 aa1.75□□□□□ -2.13
PRP38YGR075C TY1B-JR2P47100 1755 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C TY1B-ER2Q03619 1755 aa1.75□□□□□ -2.13
PRP38YGR075C TY1B-MR1Q04214 1755 aa1.75□□□□□ -2.13
PRP38YGR075C TY1B-MR2Q04670 1755 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C TY1B-LR1Q12088 1755 aaKnown RBP1.75□□□□□ -2.13
PRP38YGR075C TY1B-NL1Q12112 1755 aa1.75□□□□□ -2.13
PRP38YGR075C TY1B-GR1Q12141 1755 aa1.75□□□□□ -2.13
PRP38YGR075C TY1B-BLQ12490 1755 aa1.75□□□□□ -2.13
PRP38YGR075C SNT2P53127 1403 aa1.74□□□□□ -2.13
PRP38YGR075C COX5AP00424 153 aa1.74□□□□□ -2.13
PRP38YGR075C NHP6BP11633 99 aaKnown RBP1.74□□□□□ -2.13
PRP38YGR075C CCA1P21269 546 aa1.74□□□□□ -2.13
PRP38YGR075C SCO1P23833 295 aa1.74□□□□□ -2.13
PRP38YGR075C PBN1P25580 416 aa1.74□□□□□ -2.13
PRP38YGR075C PPA2P28239 310 aa1.74□□□□□ -2.13
PRP38YGR075C ERG24P32462 438 aaKnown RBP1.74□□□□□ -2.13
PRP38YGR075C MIC12P38341 106 aa1.74□□□□□ -2.13
PRP38YGR075C YHL026CP38740 315 aa1.74□□□□□ -2.13
PRP38YGR075C ARC15P40518 154 aaRIP-Chip data1.74□□□□□ -2.13not detected
PRP38YGR075C YRB1P41920 201 aaKnown RBP1.74□□□□□ -2.13
PRP38YGR075C HAM1P47119 197 aaKnown RBP1.74□□□□□ -2.13
PRP38YGR075C TRM9P49957 279 aa1.74□□□□□ -2.13
PRP38YGR075C RMR1P53060 241 aa1.74□□□□□ -2.13
PRP38YGR075C NSA1P53136 463 aaPredicted RBP1.74□□□□□ -2.13
PRP38YGR075C GTR2P53290 341 aa1.74□□□□□ -2.13
PRP38YGR075C MSA1Q08471 629 aa1.74□□□□□ -2.13
PRP38YGR075C TPO4Q12256 659 aa1.74□□□□□ -2.13
PRP38YGR075C TY3B-GQ99315 1547 aa1.74□□□□□ -2.13
PRP38YGR075C IPP1P00817 287 aaKnown RBP1.73□□□□□ -2.13
PRP38YGR075C Q0255P03881 472 aa1.73□□□□□ -2.13
PRP38YGR075C ARG80P07249 177 aa1.73□□□□□ -2.13
PRP38YGR075C YMR31P19955 123 aa1.73□□□□□ -2.13
PRP38YGR075C NTG1P31378 399 aa1.73□□□□□ -2.13
PRP38YGR075C SCM4P32564 187 aa1.73□□□□□ -2.13
PRP38YGR075C YPT52P36018 234 aaKnown RBP1.73□□□□□ -2.13
PRP38YGR075C PEX17P40155 199 aa1.73□□□□□ -2.13
PRP38YGR075C CAT5P41735 233 aa1.73□□□□□ -2.13
PRP38YGR075C SMD3P43321 101 aaKnown RBP1.73□□□□□ -2.13
PRP38YGR075C RPA43P46669 326 aa1.73□□□□□ -2.13
PRP38YGR075C ILM1P47155 203 aa1.73□□□□□ -2.13
PRP38YGR075C COS6P53344 381 aa1.73□□□□□ -2.13
PRP38YGR075C PGA2P53903 129 aa1.73□□□□□ -2.13
PRP38YGR075C YMR279CQ03263 540 aa1.73□□□□□ -2.13
PRP38YGR075C CDC123Q05791 360 aa1.73□□□□□ -2.13
PRP38YGR075C RDS3Q06835 107 aaPredicted RBP1.73□□□□□ -2.13
PRP38YGR075C YKL183C-AQ3E765 70 aa1.73□□□□□ -2.13
PRP38YGR075C NCB2Q92317 146 aa1.73□□□□□ -2.13
PRP38YGR075C HTL1Q9URQ5 78 aa1.73□□□□□ -2.13
PRP38YGR075C TY1B-NL2Q99337 1749 aaKnown RBP1.73□□□□□ -2.13
PRP38YGR075C MYO4P32492 1471 aa1.73□□□□□ -2.13
PRP38YGR075C YOR1P53049 1477 aa1.73□□□□□ -2.13
PRP38YGR075C BCK1Q01389 1478 aa1.73□□□□□ -2.13
PRP38YGR075C TY1B-DR3Q99231 1755 aa1.72□□□□□ -2.13
PRP38YGR075C YHR139C-AO13536 103 aa1.72□□□□□ -2.13
PRP38YGR075C SSO1P32867 290 aa1.72□□□□□ -2.13
PRP38YGR075C RIB1P38066 345 aa1.72□□□□□ -2.13
PRP38YGR075C RPF1P38805 295 aaKnown RBP1.72□□□□□ -2.13
PRP38YGR075C YHR125WP38831 101 aa1.72□□□□□ -2.13
PRP38YGR075C ERG28P40030 148 aa1.72□□□□□ -2.13
PRP38YGR075C YJR056CP47115 236 aa1.72□□□□□ -2.13
PRP38YGR075C BAT2P47176 376 aaKnown RBP1.72□□□□□ -2.13
PRP38YGR075C SLM2P53955 656 aa1.72□□□□□ -2.13
PRP38YGR075C DID2P69771 204 aa1.72□□□□□ -2.13
PRP38YGR075C SUE1Q06524 206 aa1.72□□□□□ -2.13
PRP38YGR075C YPL257WQ08974 193 aa1.72□□□□□ -2.13
PRP38YGR075C DCN1Q12395 269 aa1.72□□□□□ -2.13
PRP38YGR075C YSP2Q06681 1438 aa1.72□□□□□ -2.13
PRP38YGR075C SIR4P11978 1358 aa1.72□□□□□ -2.13
PRP38YGR075C CHC1P22137 1653 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms