RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	CIS3	P47001	227 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	MIC26	P50087	233 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	YGR219W	P53307	113 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	TPO4	Q12256	659 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	YHR086W-A	Q3E746	53 aa		2.66	□□□□□ -1.98
NSE3	YDR288W	ECM33	P38248	429 aa	Known RBP	2.65	□□□□□ -1.99
NSE3	YDR288W	CTR2	P38865	189 aa		2.65	□□□□□ -1.99
NSE3	YDR288W	GCN20	P43535	752 aa	Known RBP	2.65	□□□□□ -1.99
NSE3	YDR288W	YJL027C	P47063	138 aa	Predicted RBP	2.65	□□□□□ -1.99
NSE3	YDR288W	TOS8	P53147	276 aa		2.65	□□□□□ -1.99
NSE3	YDR288W	LSO2	Q3E772	92 aa	Known RBP	2.65	□□□□□ -1.99
NSE3	YDR288W	YBR121C-A	P0C5L4	52 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	YPR170W-B	P0C5R9	85 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	COQ1	P18900	473 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	PBN1	P25580	416 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	MSS2	P40990	351 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	ALG13	P53178	202 aa		2.64	□□□□□ -1.99
NSE3	YDR288W	STE18	P18852	110 aa		2.63	□□□□□ -1.99
NSE3	YDR288W	PEX4	P29340	183 aa		2.63	□□□□□ -1.99
NSE3	YDR288W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
NSE3	YDR288W	YRB1	P41920	201 aa	Known RBP	2.63	□□□□□ -1.99
NSE3	YDR288W	DAD3	P69850	94 aa		2.63	□□□□□ -1.99
NSE3	YDR288W	SEY1	Q99287	776 aa		2.63	□□□□□ -1.99
NSE3	YDR288W	YHR139C-A	O13536	103 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	CDC28	P00546	298 aa	Known RBP	2.62	□□□□□ -1.99
NSE3	YDR288W	FBA1	P14540	359 aa	Known RBP	2.62	□□□□□ -1.99
NSE3	YDR288W	DOG2	P38773	246 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	DOG1	P38774	246 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	RSM25	P40496	264 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	NUP57	P48837	541 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	BRR6	P53062	197 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	MRPS8	Q03799	155 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	DCN1	Q12395	269 aa		2.62	□□□□□ -1.99
NSE3	YDR288W	CDC8	P00572	216 aa		2.61	□□□□□ -1.99
NSE3	YDR288W	CBT1	P36038	271 aa	Predicted RBP	2.61	□□□□□ -1.99
NSE3	YDR288W	URA8	P38627	578 aa	Predicted RBP	2.61	□□□□□ -1.99
NSE3	YDR288W	BXI1	P48558	297 aa		2.61	□□□□□ -1.99
NSE3	YDR288W	ERG25	P53045	309 aa		2.61	□□□□□ -1.99
NSE3	YDR288W	NEJ1	Q06148	342 aa		2.61	□□□□□ -1.99
NSE3	YDR288W	NCB2	Q92317	146 aa		2.61	□□□□□ -1.99
NSE3	YDR288W	GRX2	P17695	143 aa	Known RBP	2.6	□□□□□ -1.99
NSE3	YDR288W	ATG22	P25568	528 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	OAC1	P32332	324 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	RTC3	P38804	111 aa	Predicted RBP	2.6	□□□□□ -1.99
NSE3	YDR288W	ERG28	P40030	148 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	FCY21	P40039	528 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	TIM11	P81449	96 aa	Predicted RBP	2.6	□□□□□ -1.99
NSE3	YDR288W	YDR248C	Q03786	193 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	JLP1	Q12358	412 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	YKL183C-A	Q3E765	70 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	BOL1	Q3E793	110 aa		2.6	□□□□□ -1.99
NSE3	YDR288W	FKS1	P38631	1876 aa	Known RBP	2.6	□□□□□ -1.99
NSE3	YDR288W	SCL1	P21243	252 aa	Known RBP	2.59	□□□□□ -1.99
NSE3	YDR288W	DBF2	P22204	572 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	NTG1	P31378	399 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	PRP18	P33411	251 aa	Predicted RBP	2.59	□□□□□ -1.99
NSE3	YDR288W	SRY1	P36007	326 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	PHO88	P38264	188 aa	Predicted RBP	2.59	□□□□□ -1.99
NSE3	YDR288W	ERV15	P38312	142 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	YNL194C	P40169	301 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	RAD17	P48581	401 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	PRM8	P53174	237 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	PGA2	P53903	129 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	DID2	P69771	204 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	BNA7	Q04066	261 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	LPP1	Q04396	274 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	ARR2	Q06597	130 aa		2.59	□□□□□ -1.99
NSE3	YDR288W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
NSE3	YDR288W	ADO1	P47143	340 aa	Known RBP	2.58	□□□□□ -2
NSE3	YDR288W	YNL010W	P53981	241 aa	Known RBP	2.58	□□□□□ -2
NSE3	YDR288W	GIS3	Q12418	502 aa		2.58	□□□□□ -2
NSE3	YDR288W	YHR180W	P38868	163 aa		2.57	□□□□□ -2
NSE3	YDR288W	IRC22	P40006	225 aa		2.57	□□□□□ -2
NSE3	YDR288W	YKE4	P40544	346 aa		2.57	□□□□□ -2
NSE3	YDR288W	SNZ1	Q03148	297 aa		2.57	□□□□□ -2
NSE3	YDR288W	ARG80	P07249	177 aa		2.56	□□□□□ -2
NSE3	YDR288W	SKG1	P36169	355 aa		2.56	□□□□□ -2
NSE3	YDR288W	VTC1	P40046	129 aa	RIP-Chip data	2.56	□□□□□ -2	not detected
NSE3	YDR288W	FAR7	P43592	221 aa		2.56	□□□□□ -2
NSE3	YDR288W	PSF1	Q12488	208 aa		2.56	□□□□□ -2
NSE3	YDR288W	CDC33	P07260	213 aa	Known RBP	2.55	□□□□□ -2
NSE3	YDR288W	RPB4	P20433	221 aa	Predicted RBP	2.55	□□□□□ -2
NSE3	YDR288W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
NSE3	YDR288W	APS1	P35181	156 aa		2.55	□□□□□ -2
NSE3	YDR288W	POP4	P38336	279 aa		2.55	□□□□□ -2
NSE3	YDR288W	YHR022C	P38763	256 aa		2.55	□□□□□ -2
NSE3	YDR288W	MGA1	P53050	456 aa		2.55	□□□□□ -2
NSE3	YDR288W	CYT2	Q00873	224 aa		2.55	□□□□□ -2
NSE3	YDR288W	USB1	Q12208	290 aa	Known RBP	2.55	□□□□□ -2
NSE3	YDR288W	TDA8	Q6B2U8	126 aa		2.55	□□□□□ -2
NSE3	YDR288W	RAS2	P01120	322 aa	Known RBP	2.54	□□□□□ -2
NSE3	YDR288W	PRM10	P42946	383 aa		2.54	□□□□□ -2
NSE3	YDR288W	IRC18	P47056	224 aa		2.54	□□□□□ -2
NSE3	YDR288W	AIF1	P52923	378 aa		2.54	□□□□□ -2
NSE3	YDR288W	GCN3	P14741	305 aa		2.53	□□□□□ -2
NSE3	YDR288W	MRPS28	P21771	286 aa		2.53	□□□□□ -2
NSE3	YDR288W	MGM101	P32787	269 aa	Known RBP	2.53	□□□□□ -2
NSE3	YDR288W	MRPL28	P36527	147 aa		2.53	□□□□□ -2
NSE3	YDR288W	RMD6	P39975	231 aa		2.53	□□□□□ -2
NSE3	YDR288W	PEP8	P40335	379 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms