RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W POM33Q12164 279 aa3.24□□□□□ -1.89
TSR1YDL060W YMR31P19955 123 aa3.23□□□□□ -1.89
TSR1YDL060W BUB2P26448 306 aaPredicted RBP3.23□□□□□ -1.89
TSR1YDL060W ATP7P30902 174 aa3.23□□□□□ -1.89
TSR1YDL060W SFC1P33303 322 aa3.23□□□□□ -1.89
TSR1YDL060W CPR5P35176 225 aa3.23□□□□□ -1.89
TSR1YDL060W YPT35P38815 214 aaKnown RBP3.23□□□□□ -1.89
TSR1YDL060W YNL194CP40169 301 aa3.23□□□□□ -1.89
TSR1YDL060W PRE6P40303 254 aaKnown RBP3.23□□□□□ -1.89
TSR1YDL060W DAN1P47178 298 aa3.23□□□□□ -1.89
TSR1YDL060W YNL181WP53878 407 aa3.23□□□□□ -1.89
TSR1YDL060W LSM3P57743 89 aaKnown RBP3.23□□□□□ -1.89
TSR1YDL060W YPL245WQ12179 454 aaKnown RBP3.23□□□□□ -1.89
TSR1YDL060W JLP1Q12358 412 aa3.23□□□□□ -1.89
TSR1YDL060W YKL183C-AQ3E765 70 aa3.23□□□□□ -1.89
TSR1YDL060W FIG2P25653 1609 aa3.23□□□□□ -1.89
TSR1YDL060W RPL31AP0C2H8 113 aaKnown RBP3.23□□□□□ -1.89
TSR1YDL060W GCY1P14065 312 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
TSR1YDL060W URA6P15700 204 aa3.23□□□□□ -1.89
TSR1YDL060W SEC22P22214 214 aa3.23□□□□□ -1.89
TSR1YDL060W POF1P25576 258 aa3.23□□□□□ -1.89
TSR1YDL060W TIR2P33890 251 aa3.23□□□□□ -1.89
TSR1YDL060W URA8P38627 578 aaPredicted RBP3.23□□□□□ -1.89
TSR1YDL060W GWT1P47026 490 aa3.23□□□□□ -1.89
TSR1YDL060W YJR030CP47101 745 aa3.23□□□□□ -1.89
TSR1YDL060W MDM34P53083 459 aa3.23□□□□□ -1.89
TSR1YDL060W CPD1P53314 239 aa3.23□□□□□ -1.89
TSR1YDL060W RFU1Q08003 200 aa3.23□□□□□ -1.89
TSR1YDL060W GRE1Q08969 168 aa3.23□□□□□ -1.89
TSR1YDL060W YDL009CQ12210 107 aa3.23□□□□□ -1.89
TSR1YDL060W SUS1Q6WNK7 96 aa3.23□□□□□ -1.89
TSR1YDL060W SAL1D6W196 494 aa3.22□□□□□ -1.89
TSR1YDL060W YOL163WP0CF20 169 aa3.22□□□□□ -1.89
TSR1YDL060W POX1P13711 748 aa3.22□□□□□ -1.89
TSR1YDL060W MTF1P14908 341 aaKnown RBP3.22□□□□□ -1.89
TSR1YDL060W SPS19P32573 292 aaKnown RBP3.22□□□□□ -1.89
TSR1YDL060W CAF4P36130 643 aa3.22□□□□□ -1.89
TSR1YDL060W YHR035WP38769 630 aa3.22□□□□□ -1.89
TSR1YDL060W AIM18P38884 321 aa3.22□□□□□ -1.89
TSR1YDL060W GLR1P41921 483 aaKnown RBP3.22□□□□□ -1.89
TSR1YDL060W PAC10P48363 199 aa3.22□□□□□ -1.89
TSR1YDL060W VEL1P53058 206 aa3.22□□□□□ -1.89
TSR1YDL060W NQM1P53228 333 aaPredicted RBP3.22□□□□□ -1.89
TSR1YDL060W ZEO1Q08245 113 aa3.22□□□□□ -1.89
TSR1YDL060W SRL1Q08673 210 aa3.22□□□□□ -1.89
TSR1YDL060W YIL134C-AQ45U18 67 aa3.22□□□□□ -1.89
TSR1YDL060W YCL012CQ8J0M4 134 aa3.22□□□□□ -1.89
TSR1YDL060W YBR121C-AP0C5L4 52 aa3.22□□□□□ -1.89
TSR1YDL060W MRPL44P19956 98 aa3.22□□□□□ -1.89
TSR1YDL060W CPR4P25334 318 aa3.22□□□□□ -1.89
TSR1YDL060W SRB6P32570 121 aa3.22□□□□□ -1.89
TSR1YDL060W AVT5P38176 459 aa3.22□□□□□ -1.89
TSR1YDL060W IKI1P38874 309 aa3.22□□□□□ -1.89
TSR1YDL060W YIL152WP40455 235 aa3.22□□□□□ -1.89
TSR1YDL060W ICE2P40499 491 aa3.22□□□□□ -1.89
TSR1YDL060W PMT4P46971 762 aa3.22□□□□□ -1.89
TSR1YDL060W SWC4P53201 476 aa3.22□□□□□ -1.89
TSR1YDL060W YMD8Q03697 442 aa3.22□□□□□ -1.89
TSR1YDL060W SHH3Q04487 196 aa3.22□□□□□ -1.89
TSR1YDL060W VPS74Q06385 345 aa3.22□□□□□ -1.89
TSR1YDL060W CSI2Q08054 341 aa3.22□□□□□ -1.89
TSR1YDL060W YPL199CQ08954 240 aa3.22□□□□□ -1.89
TSR1YDL060W ATG41Q12048 136 aa3.22□□□□□ -1.89
TSR1YDL060W SPC3Q12133 184 aa3.22□□□□□ -1.89
TSR1YDL060W TIR4Q12218 487 aaPredicted RBP3.22□□□□□ -1.89
TSR1YDL060W YEL009C-AA0A023PZF2 135 aa3.21□□□□□ -1.9
TSR1YDL060W MAG1P22134 296 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W SNC2P33328 115 aa3.21□□□□□ -1.9
TSR1YDL060W PTH1P38876 190 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W SEC72P39742 193 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W LSM4P40070 187 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W VMA21P41806 77 aa3.21□□□□□ -1.9
TSR1YDL060W WWM1P43582 211 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W ATG18P43601 500 aa3.21□□□□□ -1.9
TSR1YDL060W AVT4P50944 713 aa3.21□□□□□ -1.9
TSR1YDL060W NBP35P52920 328 aa3.21□□□□□ -1.9
TSR1YDL060W PEX31P53203 462 aa3.21□□□□□ -1.9
TSR1YDL060W TDA7P53882 636 aaPredicted RBP3.21□□□□□ -1.9
TSR1YDL060W PKR1Q03880 122 aaKnown RBP3.21□□□□□ -1.9
TSR1YDL060W YDR124WQ04608 324 aa3.21□□□□□ -1.9
TSR1YDL060W RNH202Q05635 350 aa3.21□□□□□ -1.9
TSR1YDL060W GAS2Q06135 555 aa3.21□□□□□ -1.9
TSR1YDL060W NDD1Q08887 554 aa3.21□□□□□ -1.9
TSR1YDL060W MHT1Q12525 324 aa3.21□□□□□ -1.9
TSR1YDL060W YDR157WA0A023PZE8 133 aa3.2□□□□□ -1.9
TSR1YDL060W HTB1P02293 131 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W HTB2P02294 131 aa3.2□□□□□ -1.9
TSR1YDL060W RPL35AP0CX84 120 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W RPL35BP0CX85 120 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W NAM2P11325 894 aa3.2□□□□□ -1.9
TSR1YDL060W MRS4P23500 304 aa3.2□□□□□ -1.9
TSR1YDL060W GLC7P32598 312 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W NTF2P33331 125 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W MRPL28P36527 147 aa3.2□□□□□ -1.9
TSR1YDL060W SDH4P37298 181 aa3.2□□□□□ -1.9
TSR1YDL060W MTC4P38335 694 aaKnown RBP3.2□□□□□ -1.9
TSR1YDL060W MST28P39552 234 aa3.2□□□□□ -1.9
TSR1YDL060W GDS1P41913 522 aa3.2□□□□□ -1.9
TSR1YDL060W SFH5P47008 294 aa3.2□□□□□ -1.9
TSR1YDL060W MST27P53176 234 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms