RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	MSH5	Q12175	901 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	SNF8	Q12483	233 aa		3.88	□□□□□ -1.79
SIR2	YDL042C	RNA15	P25299	296 aa	Predicted RBP	3.87	□□□□□ -1.79
SIR2	YDL042C	CAB3	P36076	571 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	YER084W	P40057	128 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	AGX1	P43567	385 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	ASI3	P53983	676 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	ATG31	Q12421	196 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	HIS3	P06633	220 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	HOM6	P31116	359 aa	Known RBP	3.87	□□□□□ -1.79
SIR2	YDL042C	SRL4	Q03085	281 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	PAM18	Q07914	168 aa		3.87	□□□□□ -1.79
SIR2	YDL042C	SMT3	Q12306	101 aa	Known RBP	3.87	□□□□□ -1.79
SIR2	YDL042C	IRA2	P19158	3079 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	RAD10	P06838	210 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	SGE1	P33335	543 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	TCD1	P38756	429 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	MED6	P38782	295 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	EDC3	P39998	551 aa	Known RBP	3.86	□□□□□ -1.79
SIR2	YDL042C	FEX1	Q08913	375 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	FEX2	Q08991	375 aa		3.86	□□□□□ -1.79
SIR2	YDL042C	MSB2	P32334	1306 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	TDH2	P00358	332 aa	Known RBP	3.85	□□□□□ -1.79
SIR2	YDL042C	TOM40	P23644	387 aa	Known RBP	3.85	□□□□□ -1.79
SIR2	YDL042C	SFC1	P33303	322 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	YJL028W	P47062	111 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	MRPL50	P53724	139 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	FCF1	Q05498	189 aa	Predicted RBP	3.85	□□□□□ -1.79
SIR2	YDL042C	GRX8	Q05926	109 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	CSM4	Q08955	156 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	TOR1	P35169	2470 aa		3.85	□□□□□ -1.79
SIR2	YDL042C	KRE1	P17260	313 aa		3.84	□□□□□ -1.79
SIR2	YDL042C	MIG1	P27705	504 aa		3.84	□□□□□ -1.79
SIR2	YDL042C	TEM1	P38987	245 aa		3.84	□□□□□ -1.79
SIR2	YDL042C	TIM11	P81449	96 aa	Predicted RBP	3.84	□□□□□ -1.79
SIR2	YDL042C	PET117	Q02771	107 aa		3.84	□□□□□ -1.79
SIR2	YDL042C	ATG17	Q06410	417 aa		3.84	□□□□□ -1.79
SIR2	YDL042C	MEI4	P29467	408 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	SDH4	P37298	181 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	AIM18	P38884	321 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	FMC1	P40491	155 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	YJR079W	P47126	109 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	USE1	P53146	245 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	YNL247W	P53852	767 aa	Known RBP	3.84	□□□□□ -1.8
SIR2	YDL042C	YPR098C	Q06089	161 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	CLP1	Q08685	445 aa	Predicted RBP	3.84	□□□□□ -1.8
SIR2	YDL042C	YLR046C	Q12253	270 aa		3.84	□□□□□ -1.8
SIR2	YDL042C	YLR462W	O13556	202 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	DPB2	P24482	689 aa	Predicted RBP	3.83	□□□□□ -1.8
SIR2	YDL042C	EHD3	P28817	500 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	URA8	P38627	578 aa	Predicted RBP	3.83	□□□□□ -1.8
SIR2	YDL042C	NUP84	P52891	726 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	CTF19	Q02732	369 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	PIR1	Q03178	341 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	BOP2	Q06150	570 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	COQ10	Q08058	207 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	OCA6	Q12454	224 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	YPL247C	Q12523	523 aa		3.83	□□□□□ -1.8
SIR2	YDL042C	YEL028W	P39989	153 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	EMI1	Q04406	187 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	YPR147C	Q06522	304 aa	Known RBP	3.82	□□□□□ -1.8
SIR2	YDL042C	SWC7	Q06707	132 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	HRT1	Q08273	121 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	AGC1	Q12482	902 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	YBL008W-A	Q3E821	79 aa		3.82	□□□□□ -1.8
SIR2	YDL042C	MAL32	P38158	584 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	LIA1	P47120	325 aa	Known RBP	3.81	□□□□□ -1.8
SIR2	YDL042C	MAL12	P53341	584 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	SML1	Q04964	104 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	SLD7	Q08457	257 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	RRS1	Q08746	203 aa	Known RBP	3.81	□□□□□ -1.8
SIR2	YDL042C	PST1	Q12355	444 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	PEX11	Q12462	236 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	NOT5	Q12514	560 aa	Predicted RBP	3.81	□□□□□ -1.8
SIR2	YDL042C	COX5A	P00424	153 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	YKR104W	P0CE69	306 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	SRB4	P32569	687 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	YBR096W	P38256	230 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	FZO1	P38297	855 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	PIR5	P46999	287 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	YCT1	Q12235	531 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	YPR011C	Q12251	326 aa		3.81	□□□□□ -1.8
SIR2	YDL042C	EFG1	Q3E705	233 aa	Known RBP	3.81	□□□□□ -1.8
SIR2	YDL042C	SEN1	Q00416	2231 aa	Known RBP	3.8	□□□□□ -1.8
SIR2	YDL042C	RNP1	P32385	249 aa		3.8	□□□□□ -1.8
SIR2	YDL042C	MDM34	P53083	459 aa		3.8	□□□□□ -1.8
SIR2	YDL042C	KRE28	Q04431	385 aa		3.8	□□□□□ -1.8
SIR2	YDL042C	YMR114C	Q04471	368 aa	Known RBP	3.8	□□□□□ -1.8
SIR2	YDL042C	SNU23	Q12368	194 aa	Predicted RBP	3.8	□□□□□ -1.8
SIR2	YDL042C	GDH2	P33327	1092 aa	Known RBP	3.79	□□□□□ -1.8
SIR2	YDL042C	GOS1	P38736	223 aa		3.79	□□□□□ -1.8
SIR2	YDL042C	SYF2	P53277	215 aa	Predicted RBP	3.79	□□□□□ -1.8
SIR2	YDL042C	YCR016W	P25617	290 aa	Known RBP	3.78	□□□□□ -1.8
SIR2	YDL042C	YKR032W	P36127	104 aa		3.78	□□□□□ -1.8
SIR2	YDL042C	JHD2	P47156	728 aa	Predicted RBP	3.78	□□□□□ -1.8
SIR2	YDL042C	EMC4	P53073	190 aa		3.78	□□□□□ -1.8
SIR2	YDL042C	RNH1	Q04740	348 aa		3.78	□□□□□ -1.8
SIR2	YDL042C	PPH21	P23594	369 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	RAD51	P25454	400 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	SSH1	P38353	490 aa	Known RBP	3.78	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms