RNA–Protein interactions for RNA: snR58

snR58, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR58, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR58snR58 ACL4Q03771 387 aa-3.09□□□□□ -2.9
snR58snR58 YDR341CQ05506 607 aaKnown RBP-3.09□□□□□ -2.9
snR58snR58 YLR194CQ05777 254 aa-3.09□□□□□ -2.9
snR58snR58 YLR446WQ06204 433 aa-3.09□□□□□ -2.9
snR58snR58 AAD15Q08361 143 aa-3.09□□□□□ -2.9
snR58snR58 EMP46Q12396 444 aa-3.09□□□□□ -2.9
snR58snR58 DBR1P24309 405 aaKnown RBP-3.1□□□□□ -2.91
snR58snR58 CWP1P28319 239 aa-3.1□□□□□ -2.91
snR58snR58 YET1P35723 206 aa-3.1□□□□□ -2.91
snR58snR58 KAP123P40069 1113 aaKnown RBP-3.1□□□□□ -2.91
snR58snR58 CPD1P53314 239 aa-3.1□□□□□ -2.91
snR58snR58 VPS75P53853 264 aa-3.1□□□□□ -2.91
snR58snR58 AVO2Q04749 426 aa-3.1□□□□□ -2.91
snR58snR58 LOA1Q06508 300 aa-3.1□□□□□ -2.91
snR58snR58 YPR078CQ06813 372 aa-3.1□□□□□ -2.91
snR58snR58 YLR012CQ07927 99 aa-3.1□□□□□ -2.91
snR58snR58 HRD1Q08109 551 aa-3.1□□□□□ -2.91
snR58snR58 FCY1Q12178 158 aa-3.1□□□□□ -2.91
snR58snR58 YPR1Q12458 312 aa-3.1□□□□□ -2.91
snR58snR58 SWI1P09547 1314 aa-3.11□□□□□ -2.91
snR58snR58 MVB12P42939 101 aa-3.11□□□□□ -2.91
snR58snR58 RTC4P53850 401 aa-3.11□□□□□ -2.91
snR58snR58 JJJ1P53863 590 aa-3.11□□□□□ -2.91
snR58snR58 RGS2Q99188 309 aa-3.11□□□□□ -2.91
snR58snR58 PDE2P06776 526 aa-3.12□□□□□ -2.91
snR58snR58 ARF2P19146 181 aaKnown RBP-3.12□□□□□ -2.91
snR58snR58 OCA4P25366 362 aa-3.12□□□□□ -2.91
snR58snR58 MEI5P32489 222 aa-3.12□□□□□ -2.91
snR58snR58 IMP3P32899 183 aaPredicted RBP-3.12□□□□□ -2.91
snR58snR58 SER3P40054 469 aa-3.12□□□□□ -2.91
snR58snR58 CUE4Q04201 117 aaPredicted RBP-3.12□□□□□ -2.91
snR58snR58 IRC23Q08416 157 aa-3.12□□□□□ -2.91
snR58snR58 FRE6Q12473 712 aa-3.12□□□□□ -2.91
snR58snR58 HUG1Q6Q5K6 68 aa-3.12□□□□□ -2.91
snR58snR58 MSF1P08425 469 aa-3.13□□□□□ -2.91
snR58snR58 IFM1P25038 676 aa-3.13□□□□□ -2.91
snR58snR58 RPA12P32529 125 aaKnown RBP-3.13□□□□□ -2.91
snR58snR58 FET3P38993 636 aa-3.13□□□□□ -2.91
snR58snR58 CAJ1P39101 391 aa-3.13□□□□□ -2.91
snR58snR58 AST2P39945 430 aaKnown RBP-3.13□□□□□ -2.91
snR58snR58 SAP185P40856 1058 aa-3.13□□□□□ -2.91
snR58snR58 CIN5P40917 295 aa-3.13□□□□□ -2.91
snR58snR58 ATG39Q06159 398 aa-3.13□□□□□ -2.91
snR58snR58 YPR174CQ06616 221 aaPredicted RBP-3.13□□□□□ -2.91
snR58snR58 YOL014WQ08110 124 aa-3.13□□□□□ -2.91
snR58snR58 GIS3Q12418 502 aa-3.13□□□□□ -2.91
snR58snR58 SNA3P14359 133 aa-3.14□□□□□ -2.91
snR58snR58 CKI1P20485 582 aa-3.14□□□□□ -2.91
snR58snR58 EFB1P32471 206 aaKnown RBP-3.14□□□□□ -2.91
snR58snR58 AEP1P32493 518 aa-3.14□□□□□ -2.91
snR58snR58 PAF1P38351 445 aa-3.14□□□□□ -2.91
snR58snR58 YPT31P38555 223 aaKnown RBP-3.14□□□□□ -2.91
snR58snR58 LCP5P40079 357 aaPredicted RBP-3.14□□□□□ -2.91
snR58snR58 SPO22P40511 975 aa-3.14□□□□□ -2.91
snR58snR58 EAF6P47128 113 aa-3.14□□□□□ -2.91
snR58snR58 RET3P53600 189 aa-3.14□□□□□ -2.91
snR58snR58 SDC1Q03323 175 aa-3.14□□□□□ -2.91
snR58snR58 YCT1Q12235 531 aa-3.14□□□□□ -2.91
snR58snR58 ATG40Q99325 256 aa-3.14□□□□□ -2.91
snR58snR58 AI5_BETAQ9ZZX0 354 aa-3.14□□□□□ -2.91
snR58snR58 UBR1P19812 1950 aa-3.14□□□□□ -2.91
snR58snR58 ATP6P00854 259 aa-3.15□□□□□ -2.91
snR58snR58 COX8P04039 78 aa-3.15□□□□□ -2.91
snR58snR58 FCY2P17064 533 aa-3.15□□□□□ -2.91
snR58snR58 CLB3P24870 427 aa-3.15□□□□□ -2.91
snR58snR58 HIS2P38635 335 aa-3.15□□□□□ -2.91
snR58snR58 OTU2P38747 307 aaKnown RBP-3.15□□□□□ -2.91
snR58snR58 RFC2P40348 353 aa-3.15□□□□□ -2.91
snR58snR58 YFR035CP43608 114 aa-3.15□□□□□ -2.91
snR58snR58 TCB2P48231 1178 aa-3.15□□□□□ -2.91
snR58snR58 YGL034CP53186 121 aa-3.15□□□□□ -2.91
snR58snR58 SWC4P53201 476 aa-3.15□□□□□ -2.91
snR58snR58 RPT4P53549 437 aaKnown RBP-3.15□□□□□ -2.91
snR58snR58 ATC1Q04005 294 aa-3.15□□□□□ -2.91
snR58snR58 BRX1Q08235 291 aaKnown RBP-3.15□□□□□ -2.91
snR58snR58 YOR114WQ12219 294 aa-3.15□□□□□ -2.91
snR58snR58 DGK1Q12382 290 aa-3.15□□□□□ -2.91
snR58snR58 YOL159C-AQ3E769 90 aa-3.15□□□□□ -2.91
snR58snR58 YMR316C-AI2HB70 103 aa-3.16□□□□□ -2.92
snR58snR58 CDC8P00572 216 aa-3.16□□□□□ -2.92
snR58snR58 URA7P28274 579 aaKnown RBP-3.16□□□□□ -2.92
snR58snR58 SHB17P36136 271 aaKnown RBP-3.16□□□□□ -2.92
snR58snR58 LAS1P36146 502 aaPredicted RBP-3.16□□□□□ -2.92
snR58snR58 PEX32P38292 413 aa-3.16□□□□□ -2.92
snR58snR58 SMF1P38925 575 aa-3.16□□□□□ -2.92
snR58snR58 YER034WP40022 185 aaKnown RBP-3.16□□□□□ -2.92
snR58snR58 VID27P40157 782 aa-3.16□□□□□ -2.92
snR58snR58 GCD14P46959 383 aaPredicted RBP-3.16□□□□□ -2.92
snR58snR58 SNX41Q04053 625 aa-3.16□□□□□ -2.92
snR58snR58 AIM45Q12480 344 aaKnown RBP-3.16□□□□□ -2.92
snR58snR58 ISN1Q99312 450 aa-3.16□□□□□ -2.92
snR58snR58 TY1B-HO13535 1793 aa-3.17□□□□□ -2.92
snR58snR58 PHO13P19881 312 aa-3.17□□□□□ -2.92
snR58snR58 DCC1P25559 380 aa-3.17□□□□□ -2.92
snR58snR58 ERG24P32462 438 aaKnown RBP-3.17□□□□□ -2.92
snR58snR58 SAS3P34218 831 aa-3.17□□□□□ -2.92
snR58snR58 MCH2P36032 473 aa-3.17□□□□□ -2.92
snR58snR58 RRN3P36070 627 aa-3.17□□□□□ -2.92
snR58snR58 HEK2P38199 381 aaKnown RBP RIP-Chip data-3.17□□□□□ -2.92not detected
snR58snR58 YIL089WP40500 205 aa-3.17□□□□□ -2.92
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms