RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W COX5AP00424 153 aa0.99□□□□□ -2.25
YOP1YPR028W IPP1P00817 287 aaKnown RBP0.99□□□□□ -2.25
YOP1YPR028W TCP1P12612 559 aaKnown RBP0.99□□□□□ -2.25
YOP1YPR028W MRPL25P23369 157 aa0.99□□□□□ -2.25
YOP1YPR028W SRB4P32569 687 aa0.99□□□□□ -2.25
YOP1YPR028W DOA4P32571 926 aa0.99□□□□□ -2.25
YOP1YPR028W YKL075CP36083 450 aa0.99□□□□□ -2.25
YOP1YPR028W MSA2P36157 363 aa0.99□□□□□ -2.25
YOP1YPR028W YMR144WP40214 342 aaKnown RBP0.99□□□□□ -2.25
YOP1YPR028W FIS1P40515 155 aa0.99□□□□□ -2.25
YOP1YPR028W ILM1P47155 203 aa0.99□□□□□ -2.25
YOP1YPR028W GTR2P53290 341 aa0.99□□□□□ -2.25
YOP1YPR028W YNL046WP53956 172 aa0.99□□□□□ -2.25
YOP1YPR028W DAD3P69850 94 aa0.99□□□□□ -2.25
YOP1YPR028W PET117Q02771 107 aa0.99□□□□□ -2.25
YOP1YPR028W DCR2Q05924 578 aa0.99□□□□□ -2.25
YOP1YPR028W SEI1Q06058 285 aa0.99□□□□□ -2.25
YOP1YPR028W AKR2Q12013 749 aa0.99□□□□□ -2.25
YOP1YPR028W HTL1Q9URQ5 78 aa0.99□□□□□ -2.25
YOP1YPR028W RPL9AP05738 191 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W YHR032W-AP0C5N6 59 aa0.98□□□□□ -2.25
YOP1YPR028W DSF1P0CX08 502 aa0.98□□□□□ -2.25
YOP1YPR028W YNR073CP0CX09 502 aa0.98□□□□□ -2.25
YOP1YPR028W ERD2P18414 219 aa0.98□□□□□ -2.25
YOP1YPR028W YCR016WP25617 290 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W VMA11P32842 164 aa0.98□□□□□ -2.25
YOP1YPR028W YPT52P36018 234 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W LDB7P38210 180 aa0.98□□□□□ -2.25
YOP1YPR028W CUE1P38428 203 aa0.98□□□□□ -2.25
YOP1YPR028W DOG1P38774 246 aa0.98□□□□□ -2.25
YOP1YPR028W YJL027CP47063 138 aaPredicted RBP0.98□□□□□ -2.25
YOP1YPR028W YJR056CP47115 236 aa0.98□□□□□ -2.25
YOP1YPR028W HAM1P47119 197 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W LIA1P47120 325 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W RPL9BP51401 191 aaKnown RBP0.98□□□□□ -2.25
YOP1YPR028W NUP84P52891 726 aa0.98□□□□□ -2.25
YOP1YPR028W YLR283WQ05867 314 aa0.98□□□□□ -2.25
YOP1YPR028W YLR126CQ12288 251 aa0.98□□□□□ -2.25
YOP1YPR028W YHR086W-AQ3E746 53 aa0.98□□□□□ -2.25
YOP1YPR028W YOR020W-AQ3E824 90 aa0.98□□□□□ -2.25
YOP1YPR028W SNA3P14359 133 aa0.97□□□□□ -2.25
YOP1YPR028W RPO26P20435 155 aa0.97□□□□□ -2.25
YOP1YPR028W MSN4P33749 630 aa0.97□□□□□ -2.25
YOP1YPR028W YAR068WP39564 161 aa0.97□□□□□ -2.25
YOP1YPR028W FCY21P40039 528 aa0.97□□□□□ -2.25
YOP1YPR028W CAT5P41735 233 aa0.97□□□□□ -2.25
YOP1YPR028W SMD3P43321 101 aaKnown RBP0.97□□□□□ -2.25
YOP1YPR028W MCM22P47167 239 aa0.97□□□□□ -2.25
YOP1YPR028W YML108WQ03759 105 aa0.97□□□□□ -2.25
YOP1YPR028W SSQ1Q05931 657 aaPredicted RBP0.97□□□□□ -2.25
YOP1YPR028W ATG39Q06159 398 aa0.97□□□□□ -2.25
YOP1YPR028W ATO3Q12359 275 aa0.97□□□□□ -2.25
YOP1YPR028W BOL1Q3E793 110 aa0.97□□□□□ -2.25
YOP1YPR028W MSW1P04803 379 aa0.96□□□□□ -2.26
YOP1YPR028W FBA1P14540 359 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W FCY2P17064 533 aa0.96□□□□□ -2.26
YOP1YPR028W SCL1P21243 252 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W RPS5P26783 225 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W PEX4P29340 183 aa0.96□□□□□ -2.26
YOP1YPR028W MDH3P32419 343 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
YOP1YPR028W RIB1P38066 345 aa0.96□□□□□ -2.26
YOP1YPR028W RPF1P38805 295 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W CTR2P38865 189 aa0.96□□□□□ -2.26
YOP1YPR028W PRE6P40303 254 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W RSM25P40496 264 aa0.96□□□□□ -2.26
YOP1YPR028W YIL001WP40560 513 aa0.96□□□□□ -2.26
YOP1YPR028W RPA43P46669 326 aa0.96□□□□□ -2.26
YOP1YPR028W CIS3P47001 227 aa0.96□□□□□ -2.26
YOP1YPR028W BAT2P47176 376 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W YJR149WP47177 404 aa0.96□□□□□ -2.26
YOP1YPR028W YGR219WP53307 113 aa0.96□□□□□ -2.26
YOP1YPR028W ABF2Q02486 183 aa0.96□□□□□ -2.26
YOP1YPR028W YML096WQ04489 525 aa0.96□□□□□ -2.26
YOP1YPR028W MSA1Q08471 629 aa0.96□□□□□ -2.26
YOP1YPR028W NIP7Q08962 181 aaKnown RBP0.96□□□□□ -2.26
YOP1YPR028W SIR4P11978 1358 aa0.96□□□□□ -2.26
YOP1YPR028W SPT3P06844 337 aa0.95□□□□□ -2.26
YOP1YPR028W BCY1P07278 416 aaKnown RBP0.95□□□□□ -2.26
YOP1YPR028W CDC10P25342 322 aaKnown RBP0.95□□□□□ -2.26
YOP1YPR028W NTF2P33331 125 aaKnown RBP0.95□□□□□ -2.26
YOP1YPR028W VPS21P36017 210 aaKnown RBP0.95□□□□□ -2.26
YOP1YPR028W YBR063CP38083 404 aa0.95□□□□□ -2.26
YOP1YPR028W YER085CP40058 173 aa0.95□□□□□ -2.26
YOP1YPR028W COX15P40086 486 aa0.95□□□□□ -2.26
YOP1YPR028W AYR1P40471 297 aa0.95□□□□□ -2.26
YOP1YPR028W RPC17P47076 161 aa0.95□□□□□ -2.26
YOP1YPR028W TRM9P49957 279 aa0.95□□□□□ -2.26
YOP1YPR028W ERG25P53045 309 aa0.95□□□□□ -2.26
YOP1YPR028W NSA1P53136 463 aaPredicted RBP0.95□□□□□ -2.26
YOP1YPR028W DID2P69771 204 aa0.95□□□□□ -2.26
YOP1YPR028W YMD8Q03697 442 aa0.95□□□□□ -2.26
YOP1YPR028W MRPS8Q03799 155 aa0.95□□□□□ -2.26
YOP1YPR028W NEJ1Q06148 342 aa0.95□□□□□ -2.26
YOP1YPR028W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
YOP1YPR028W TPO4Q12256 659 aa0.95□□□□□ -2.26
YOP1YPR028W YPL229WQ99395 206 aa0.95□□□□□ -2.26
YOP1YPR028W CFT1Q06632 1357 aaKnown RBP0.95□□□□□ -2.26
YOP1YPR028W MATALPHA1P0CY06 175 aa0.94□□□□□ -2.26
YOP1YPR028W HMLALPHA1P0CY07 175 aa0.94□□□□□ -2.26
YOP1YPR028W GRX2P17695 143 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms