RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	LOC1	P43586	204 aa	Predicted RBP	0.24	□□□□□ -2.37
LEE1	YPL054W	GCD14	P46959	383 aa	Predicted RBP	0.24	□□□□□ -2.37
LEE1	YPL054W	MRX5	P47007	382 aa		0.24	□□□□□ -2.37
LEE1	YPL054W	GTR2	P53290	341 aa		0.24	□□□□□ -2.37
LEE1	YPL054W	YPR147C	Q06522	304 aa	Known RBP	0.24	□□□□□ -2.37
LEE1	YPL054W	MDY2	Q12285	212 aa		0.24	□□□□□ -2.37
LEE1	YPL054W	TAO3	P40468	2376 aa		0.23	□□□□□ -2.37
LEE1	YPL054W	RIO2	P40160	425 aa	Known RBP	0.23	□□□□□ -2.37
LEE1	YPL054W	YJR012C	P47087	207 aa		0.23	□□□□□ -2.37
LEE1	YPL054W	LSB1	P53281	241 aa		0.23	□□□□□ -2.37
LEE1	YPL054W	HFA1	P32874	2273 aa		0.23	□□□□□ -2.37
LEE1	YPL054W	STF1	P01098	86 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	MET16	P18408	261 aa	Predicted RBP	0.22	□□□□□ -2.37
LEE1	YPL054W	TIR3	P40552	269 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	RPL33B	P41056	107 aa	Known RBP	0.22	□□□□□ -2.37
LEE1	YPL054W	RMR1	P53060	241 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	ERV41	Q04651	352 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	ATG39	Q06159	398 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	REX3	Q12090	404 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	TPO4	Q12256	659 aa		0.22	□□□□□ -2.37
LEE1	YPL054W	SSK22	P25390	1331 aa	Predicted RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	MEK1	P24719	497 aa	Predicted RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	COA1	P40452	197 aa		0.21	□□□□□ -2.38
LEE1	YPL054W	FMP33	P46998	180 aa		0.21	□□□□□ -2.38
LEE1	YPL054W	MRH4	P53166	561 aa		0.21	□□□□□ -2.38
LEE1	YPL054W	MPP6	P53725	186 aa	Predicted RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	OST6	Q03723	332 aa		0.21	□□□□□ -2.38
LEE1	YPL054W	RRP40	Q08285	240 aa	Known RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	SYC1	Q08553	188 aa	Predicted RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	MRPL23	Q12487	163 aa	Predicted RBP	0.21	□□□□□ -2.38
LEE1	YPL054W	FMP16	Q12497	93 aa		0.21	□□□□□ -2.38
LEE1	YPL054W	MSB2	P32334	1306 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	YKR104W	P0CE69	306 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	EHD3	P28817	500 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	FZF1	P32805	299 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	MRX3	P38172	270 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	YAR068W	P39564	161 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	PEX17	P40155	199 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	DSN1	P40568	576 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	SNZ3	P43545	298 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	CUS2	P53830	285 aa	Predicted RBP	0.2	□□□□□ -2.38
LEE1	YPL054W	YPL257W	Q08974	193 aa		0.2	□□□□□ -2.38
LEE1	YPL054W	HIS1	P00498	297 aa	Known RBP	0.19	□□□□□ -2.38
LEE1	YPL054W	SSA3	P09435	649 aa	Known RBP	0.19	□□□□□ -2.38
LEE1	YPL054W	AQY2	P0CD90	149 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	SNA3	P14359	133 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	TPM1	P17536	199 aa	Known RBP	0.19	□□□□□ -2.38
LEE1	YPL054W	QRI5	P32344	111 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	VPS21	P36017	210 aa	Known RBP	0.19	□□□□□ -2.38
LEE1	YPL054W	YPT52	P36018	234 aa	Known RBP	0.19	□□□□□ -2.38
LEE1	YPL054W	MRPL39	P36533	70 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	DDI1	P40087	428 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	YOL160W	Q08321	113 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	SNF8	Q12483	233 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	MET5	P47169	1442 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	RIF1	P29539	1916 aa		0.19	□□□□□ -2.38
LEE1	YPL054W	IPP1	P00817	287 aa	Known RBP	0.18	□□□□□ -2.38
LEE1	YPL054W	YKL070W	P36087	169 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	TVP38	P36164	337 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	RRF1	P38771	230 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	EDC3	P39998	551 aa	Known RBP	0.18	□□□□□ -2.38
LEE1	YPL054W	THO1	P40040	218 aa	Known RBP	0.18	□□□□□ -2.38
LEE1	YPL054W	MEP1	P40260	492 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	YJR056C	P47115	236 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	DID2	P69771	204 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	ATG17	Q06410	417 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	ANT1	Q06497	328 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	LCL2	Q08045	131 aa		0.18	□□□□□ -2.38
LEE1	YPL054W	VPS3	P23643	1011 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	MEI4	P29467	408 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	TFC1	P32367	649 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	RPT5	P33297	434 aa	Known RBP	0.17	□□□□□ -2.38
LEE1	YPL054W	SGE1	P33335	543 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	JEN1	P36035	616 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.17	□□□□□ -2.38	not detected
LEE1	YPL054W	YHL042W	P38729	150 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	LAA1	P39526	2014 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YNL217W	P40152	326 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	RPA43	P46669	326 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YAE1	P47118	141 aa	Predicted RBP	0.17	□□□□□ -2.38
LEE1	YPL054W	BOL2	P53082	120 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YNL247W	P53852	767 aa	Known RBP	0.17	□□□□□ -2.38
LEE1	YPL054W	YML108W	Q03759	105 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YPR172W	Q06608	200 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	MSH5	Q12175	901 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YDL180W	Q12301	547 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	YNL146C-A	Q3E7Z1	64 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	CDC39	P25655	2108 aa	Known RBP	0.17	□□□□□ -2.38
LEE1	YPL054W	MYO1	P08964	1928 aa		0.17	□□□□□ -2.38
LEE1	YPL054W	RSR1	P13856	272 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	PBN1	P25580	416 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	PRX1	P34227	261 aa	Known RBP	0.16	□□□□□ -2.38
LEE1	YPL054W	FLX1	P40464	311 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	HAM1	P47119	197 aa	Known RBP	0.16	□□□□□ -2.38
LEE1	YPL054W	SNZ2	P53824	298 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	SPG3	Q04398	127 aa	Predicted RBP	0.16	□□□□□ -2.38
LEE1	YPL054W	SPG4	Q04438	115 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	YPR098C	Q06089	161 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	GMC2	Q06201	188 aa		0.16	□□□□□ -2.38
LEE1	YPL054W	YLR413W	Q06689	675 aa		0.16	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms