RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C YDR262WQ12331 272 aa5.08□□□□□ -1.6
CLP1YOR250C PRM4Q12498 284 aa5.08□□□□□ -1.6
CLP1YOR250C YOR338WQ99326 363 aa5.08□□□□□ -1.6
CLP1YOR250C PET20Q99373 253 aa5.08□□□□□ -1.6
CLP1YOR250C MIR1P23641 311 aaKnown RBP5.07□□□□□ -1.6
CLP1YOR250C AFG1P32317 509 aa5.07□□□□□ -1.6
CLP1YOR250C ECT1P33412 323 aa5.07□□□□□ -1.6
CLP1YOR250C YBR220CP38318 560 aa5.07□□□□□ -1.6
CLP1YOR250C TAE1P38340 232 aa5.07□□□□□ -1.6
CLP1YOR250C INM1P38710 295 aa5.07□□□□□ -1.6
CLP1YOR250C DBP8P38719 431 aa5.07□□□□□ -1.6
CLP1YOR250C ARO9P38840 513 aaPredicted RBP5.07□□□□□ -1.6
CLP1YOR250C NAS2P40555 220 aa5.07□□□□□ -1.6
CLP1YOR250C YGL101WP53144 215 aa5.07□□□□□ -1.6
CLP1YOR250C SYF2P53277 215 aaPredicted RBP5.07□□□□□ -1.6
CLP1YOR250C PGA1P53896 198 aa5.07□□□□□ -1.6
CLP1YOR250C CCE1Q03702 353 aa5.07□□□□□ -1.6
CLP1YOR250C PKR1Q03880 122 aaKnown RBP5.07□□□□□ -1.6
CLP1YOR250C UTP15Q04305 513 aaKnown RBP5.07□□□□□ -1.6
CLP1YOR250C YDL007C-AQ2V2Q0 85 aa5.07□□□□□ -1.6
CLP1YOR250C COX9P07255 59 aa5.06□□□□□ -1.6
CLP1YOR250C DPM1P14020 267 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C SCL1P21243 252 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C SEC22P22214 214 aa5.06□□□□□ -1.6
CLP1YOR250C YMC1P32331 307 aa5.06□□□□□ -1.6
CLP1YOR250C SGE1P33335 543 aa5.06□□□□□ -1.6
CLP1YOR250C UPS2P35200 230 aa5.06□□□□□ -1.6
CLP1YOR250C COS9P36034 407 aa5.06□□□□□ -1.6
CLP1YOR250C GEX2P36173 615 aa5.06□□□□□ -1.6
CLP1YOR250C FAT1P38225 669 aa5.06□□□□□ -1.6
CLP1YOR250C YHR127WP38833 243 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C TIM17P39515 158 aa5.06□□□□□ -1.6
CLP1YOR250C LYS12P40495 371 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C PMT6P42934 759 aa5.06□□□□□ -1.6
CLP1YOR250C ALK1P43633 760 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C YJR011CP47086 261 aaPredicted RBP5.06□□□□□ -1.6
CLP1YOR250C DUO1P53168 247 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C CSL4P53859 292 aaPredicted RBP5.06□□□□□ -1.6
CLP1YOR250C FMP41P53889 259 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C SNO1Q03144 224 aa5.06□□□□□ -1.6
CLP1YOR250C SDH7Q04401 133 aa5.06□□□□□ -1.6
CLP1YOR250C RSF1Q05043 376 aa5.06□□□□□ -1.6
CLP1YOR250C SCP1Q08873 200 aa5.06□□□□□ -1.6
CLP1YOR250C YOR385WQ08909 290 aa5.06□□□□□ -1.6
CLP1YOR250C RKI1Q12189 258 aa5.06□□□□□ -1.6
CLP1YOR250C YIR021W-AQ3E739 70 aa5.06□□□□□ -1.6
CLP1YOR250C SLO1Q3E784 85 aa5.06□□□□□ -1.6
CLP1YOR250C MEX67Q99257 599 aaKnown RBP5.06□□□□□ -1.6
CLP1YOR250C YOL162WP0CF19 215 aa5.05□□□□□ -1.6
CLP1YOR250C ATG8P38182 117 aaRIP-Chip data5.05□□□□□ -1.6not detected
CLP1YOR250C TVP23P38962 199 aa5.05□□□□□ -1.6
CLP1YOR250C PRP39P39682 629 aaKnown RBP5.05□□□□□ -1.6
CLP1YOR250C YEL068CP39977 110 aa5.05□□□□□ -1.6
CLP1YOR250C SBH2P52871 88 aa5.05□□□□□ -1.6
CLP1YOR250C PIR1Q03178 341 aa5.05□□□□□ -1.6
CLP1YOR250C YML096WQ04489 525 aa5.05□□□□□ -1.6
CLP1YOR250C TVP18Q04767 167 aa5.05□□□□□ -1.6
CLP1YOR250C YLR456WQ06199 204 aa5.05□□□□□ -1.6
CLP1YOR250C CTS2Q06350 511 aa5.05□□□□□ -1.6
CLP1YOR250C NOC4Q06512 552 aaPredicted RBP5.05□□□□□ -1.6
CLP1YOR250C BER1Q06688 274 aaKnown RBP5.05□□□□□ -1.6
CLP1YOR250C YOR387CQ08910 206 aa5.05□□□□□ -1.6
CLP1YOR250C FDH1Q08911 376 aa5.05□□□□□ -1.6
CLP1YOR250C TPO4Q12256 659 aa5.05□□□□□ -1.6
CLP1YOR250C YDL085C-AQ3E7B7 68 aaKnown RBP5.05□□□□□ -1.6
CLP1YOR250C PHO2P07269 559 aa5.04□□□□□ -1.6
CLP1YOR250C DFR1P07807 211 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
CLP1YOR250C ATP5P09457 212 aa5.04□□□□□ -1.6
CLP1YOR250C RPS21AP0C0V8 87 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C BUB3P26449 341 aa5.04□□□□□ -1.6
CLP1YOR250C PEX4P29340 183 aa5.04□□□□□ -1.6
CLP1YOR250C FAA1P30624 700 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C SSS1P35179 80 aa5.04□□□□□ -1.6
CLP1YOR250C YNK1P36010 153 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C MCH2P36032 473 aa5.04□□□□□ -1.6
CLP1YOR250C TCD2P36101 447 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C BNA4P38169 460 aa5.04□□□□□ -1.6
CLP1YOR250C YPC1P38298 316 aa5.04□□□□□ -1.6
CLP1YOR250C RPF1P38805 295 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C GGC1P38988 300 aa5.04□□□□□ -1.6
CLP1YOR250C BDH1P39714 382 aa5.04□□□□□ -1.6
CLP1YOR250C COX15P40086 486 aa5.04□□□□□ -1.6
CLP1YOR250C YIL067CP40514 678 aa5.04□□□□□ -1.6
CLP1YOR250C YHC3P47040 408 aa5.04□□□□□ -1.6
CLP1YOR250C GPI14P47088 403 aaKnown RBP5.04□□□□□ -1.6
CLP1YOR250C VHT1P53241 593 aa5.04□□□□□ -1.6
CLP1YOR250C YPL014WQ02606 381 aa5.04□□□□□ -1.6
CLP1YOR250C MRPL1Q04599 285 aa5.04□□□□□ -1.6
CLP1YOR250C AIM6Q07716 390 aa5.04□□□□□ -1.6
CLP1YOR250C PML1Q07930 204 aaPredicted RBP5.04□□□□□ -1.6
CLP1YOR250C FCF2Q12035 217 aaPredicted RBP5.04□□□□□ -1.6
CLP1YOR250C TFC7Q12415 435 aa5.04□□□□□ -1.6
CLP1YOR250C YPR145C-AQ2V2P0 78 aa5.04□□□□□ -1.6
CLP1YOR250C COA6Q3E846 104 aa5.04□□□□□ -1.6
CLP1YOR250C CPA1P07258 411 aaKnown RBP5.03□□□□□ -1.6
CLP1YOR250C CKA1P15790 372 aa5.03□□□□□ -1.6
CLP1YOR250C DAL82P21705 255 aa5.03□□□□□ -1.6
CLP1YOR250C PUT3P25502 979 aaPredicted RBP5.03□□□□□ -1.6
CLP1YOR250C IMG2P25642 146 aaPredicted RBP5.03□□□□□ -1.6
CLP1YOR250C MSK1P32048 576 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms