RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	BRX1	Q08235	291 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	RRG7	Q08774	242 aa	Predicted RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	YOR289W	Q12012	251 aa	Predicted RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	SFG1	Q12507	346 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	PDE2	P06776	526 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	YGL041W-A	P0C5N3	154 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	DBF2	P22204	572 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	EXG1	P23776	448 aa	Known RBP	3.05	□□□□□ -1.92
TPM1	YNL079C	MXR2	P25566	168 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	AHC2	P25649	128 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	FUN26	P31381	517 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	YEF1	P32622	495 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	TIM12	P32830	109 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	MDL1	P33310	695 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	ECT1	P33412	323 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	RPS27A	P35997	82 aa	Known RBP	3.05	□□□□□ -1.92
TPM1	YNL079C	MRPL15	P36523	253 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	DTR1	P38125	572 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	CHK1	P38147	527 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	RPS27B	P38711	82 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	SIM1	P40472	476 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	UTP25	P40498	721 aa	Known RBP	3.05	□□□□□ -1.92
TPM1	YNL079C	ICE2	P40499	491 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	YIL086C	P40503	102 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	ATG18	P43601	500 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	IRC18	P47056	224 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	APS3	P47064	194 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	NCE101	Q02820	53 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	DML1	Q03652	475 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	BUR2	Q05949	395 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	YPR127W	Q06494	345 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	YDR061W	Q12298	539 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	PSF1	Q12488	208 aa		3.05	□□□□□ -1.92
TPM1	YNL079C	KIN28	P06242	306 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	RPL1A	P0CX43	217 aa	Known RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	RPL1B	P0CX44	217 aa	Known RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	ERD2	P18414	219 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YPK2	P18961	677 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	GPI12	P23797	304 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	STP22	P25604	385 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	HOM6	P31116	359 aa	Known RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	CLG1	P35190	452 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	JEN1	P36035	616 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
TPM1	YNL079C	SWD3	P38123	315 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	PAU24	P38155	120 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	GPI16	P38875	610 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YER079W	P40052	210 aa	Known RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	RTT105	P40063	208 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YKE4	P40544	346 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YJR141W	P47172	347 aa	Predicted RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	TPN1	P53099	579 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YGR067C	P53243	804 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	ERV29	P53337	310 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	PAU12	P53343	120 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YNR062C	P53748	327 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	RAX1	Q08760	435 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YRM1	Q12340	786 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	YPR1	Q12458	312 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	FRE6	Q12473	712 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	PAR32	Q12515	295 aa	Known RBP	3.04	□□□□□ -1.92
TPM1	YNL079C	YLR099W-A	Q3E798	87 aa		3.04	□□□□□ -1.92
TPM1	YNL079C	QCR7	P00128	127 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	ADH2	P00331	348 aa	Known RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	COX9	P07255	59 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YSF3	P0C074	85 aa	Predicted RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	MRP1	P10662	321 aa	Known RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	HYM1	P32464	399 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	DOA4	P32571	926 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	TAF14	P35189	244 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	TMA19	P35691	167 aa	Known RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	GPX1	P36014	167 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YKL071W	P36086	256 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	ANR2	P36090	516 aa	Predicted RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	UTH1	P36135	365 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	MAL32	P38158	584 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	VMA22	P38784	181 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	NSG1	P38837	291 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	HPA3	P39979	161 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	PAM16	P42949	149 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	RPE1	P46969	238 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	TRM9	P49957	279 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	DIE2	P50076	525 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	PMT5	P52867	743 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	ORM1	P53224	222 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	VOA1	P53262	265 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YGR266W	P53326	701 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	MAL12	P53341	584 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	MPA43	P53583	542 aa	Predicted RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	LSM7	P53905	115 aa	Known RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	YLR460C	P54007	376 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	NUP116	Q02630	1113 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YMR252C	Q04814	134 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	TAZ1	Q06510	381 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	BSC6	Q08280	497 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YOR283W	Q12040	230 aa	Known RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	REX3	Q12090	404 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	YDL109C	Q12103	647 aa		3.03	□□□□□ -1.92
TPM1	YNL079C	TIR4	Q12218	487 aa	Predicted RBP	3.03	□□□□□ -1.92
TPM1	YNL079C	FMP27	Q06179	2628 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms