RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W KIN28P06242 306 aa1.6□□□□□ -2.15
RTP1YMR185W QCR2P07257 368 aa1.6□□□□□ -2.15
RTP1YMR185W RPB3P16370 318 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NUP1P20676 1076 aa1.6□□□□□ -2.15
RTP1YMR185W PDE1P22434 369 aa1.6□□□□□ -2.15
RTP1YMR185W PPH21P23594 369 aa1.6□□□□□ -2.15
RTP1YMR185W MIR1P23641 311 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W POP5P28005 173 aa1.6□□□□□ -2.15
RTP1YMR185W LAC1P28496 418 aa1.6□□□□□ -2.15
RTP1YMR185W DBF20P32328 564 aa1.6□□□□□ -2.15
RTP1YMR185W SRB5P32585 307 aa1.6□□□□□ -2.15
RTP1YMR185W SUI1P32911 108 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SNC2P33328 115 aa1.6□□□□□ -2.15
RTP1YMR185W TRM7P38238 310 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLM6P38343 150 aa1.6□□□□□ -2.15
RTP1YMR185W ANS1P38832 159 aa1.6□□□□□ -2.15
RTP1YMR185W WSS1P38838 269 aa1.6□□□□□ -2.15
RTP1YMR185W PZF1P39933 429 aa1.6□□□□□ -2.15
RTP1YMR185W AZF1P41696 914 aa1.6□□□□□ -2.15
RTP1YMR185W YJR120WP47157 116 aa1.6□□□□□ -2.15
RTP1YMR185W UFD1P53044 361 aa1.6□□□□□ -2.15
RTP1YMR185W ERG25P53045 309 aa1.6□□□□□ -2.15
RTP1YMR185W YGR042WP53227 271 aa1.6□□□□□ -2.15
RTP1YMR185W LEE1Q02799 301 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W PNG1Q02890 363 aa1.6□□□□□ -2.15
RTP1YMR185W ERP1Q05359 219 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NMA1Q06178 401 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W YLR456WQ06199 204 aa1.6□□□□□ -2.15
RTP1YMR185W PIN3Q06449 215 aa1.6□□□□□ -2.15
RTP1YMR185W MHR1Q06630 226 aa1.6□□□□□ -2.15
RTP1YMR185W PFA4Q12006 378 aa1.6□□□□□ -2.15
RTP1YMR185W RAD28Q12021 506 aa1.6□□□□□ -2.15
RTP1YMR185W YOR114WQ12219 294 aa1.6□□□□□ -2.15
RTP1YMR185W VAM3Q12241 283 aa1.6□□□□□ -2.15
RTP1YMR185W YOP1Q12402 180 aa1.6□□□□□ -2.15
RTP1YMR185W ODC2Q99297 307 aa1.6□□□□□ -2.15
RTP1YMR185W ATP5P09457 212 aa1.6□□□□□ -2.15
RTP1YMR185W ADH7P25377 361 aa1.6□□□□□ -2.15
RTP1YMR185W RFA3P26755 122 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NTF2P33331 125 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLC1P33333 303 aa1.6□□□□□ -2.15
RTP1YMR185W PAD1P33751 242 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
RTP1YMR185W SSS1P35179 80 aa1.6□□□□□ -2.15
RTP1YMR185W SRP102P36057 244 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W PAN3P36102 679 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W MRPL15P36523 253 aa1.6□□□□□ -2.15
RTP1YMR185W YBR013CP38215 129 aa1.6□□□□□ -2.15
RTP1YMR185W HSP10P38910 106 aa1.6□□□□□ -2.15
RTP1YMR185W OSW5P40219 148 aa1.6□□□□□ -2.15
RTP1YMR185W RFC2P40348 353 aa1.6□□□□□ -2.15
RTP1YMR185W SMD3P43321 101 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NIT2P47016 307 aa1.6□□□□□ -2.15
RTP1YMR185W YJR056CP47115 236 aa1.6□□□□□ -2.15
RTP1YMR185W SEH1P53011 349 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W YGL185CP53100 379 aa1.6□□□□□ -2.15
RTP1YMR185W YGR066CP53242 292 aa1.6□□□□□ -2.15
RTP1YMR185W HOL1P53389 586 aa1.6□□□□□ -2.15
RTP1YMR185W OGG1P53397 376 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W YIF1P53845 314 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W TDA7P53882 636 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W REC102Q02721 264 aa1.6□□□□□ -2.15
RTP1YMR185W RTT103Q05543 409 aa1.6□□□□□ -2.15
RTP1YMR185W SRL2Q12020 392 aa1.6□□□□□ -2.15
RTP1YMR185W FCF2Q12035 217 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W MCP1Q12106 302 aa1.6□□□□□ -2.15
RTP1YMR185W FYV7Q12247 151 aa1.6□□□□□ -2.15
RTP1YMR185W YDR262WQ12331 272 aa1.6□□□□□ -2.15
RTP1YMR185W SWM1Q12379 170 aa1.6□□□□□ -2.15
RTP1YMR185W YLR111WQ12528 110 aa1.6□□□□□ -2.15
RTP1YMR185W YJR112W-AQ3E743 109 aa1.6□□□□□ -2.15
RTP1YMR185W FLO9P39712 1322 aa1.6□□□□□ -2.15
RTP1YMR185W RPL31AP0C2H8 113 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W RPL31BP0C2H9 113 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W FRS1P15624 595 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CDC43P18898 376 aa1.6□□□□□ -2.15
RTP1YMR185W EHD3P28817 500 aa1.6□□□□□ -2.15
RTP1YMR185W PRE2P30656 287 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W MDH3P32419 343 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
RTP1YMR185W ECM34P38728 170 aa1.6□□□□□ -2.15
RTP1YMR185W FLX1P40464 311 aa1.6□□□□□ -2.15
RTP1YMR185W MOB2P43563 287 aa1.6□□□□□ -2.15
RTP1YMR185W YJL016WP47072 561 aa1.6□□□□□ -2.15
RTP1YMR185W BXI1P48558 297 aa1.6□□□□□ -2.15
RTP1YMR185W YGL262WP53054 175 aa1.6□□□□□ -2.15
RTP1YMR185W RMD9P53140 646 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLX9P53251 210 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W RHO5P53879 331 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CYT2Q00873 224 aa1.6□□□□□ -2.15
RTP1YMR185W CAB5Q03941 241 aa1.6□□□□□ -2.15
RTP1YMR185W THI74Q04083 370 aa1.6□□□□□ -2.15
RTP1YMR185W MRX8Q05473 314 aa1.6□□□□□ -2.15
RTP1YMR185W MRX9Q07349 420 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W BSC6Q08280 497 aa1.6□□□□□ -2.15
RTP1YMR185W IRC13Q08630 104 aa1.6□□□□□ -2.15
RTP1YMR185W SRO7Q12038 1033 aa1.6□□□□□ -2.15
RTP1YMR185W ATX2Q12067 313 aa1.6□□□□□ -2.15
RTP1YMR185W YDL085C-AQ3E7B7 68 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CCH1P50077 2039 aa1.59□□□□□ -2.15
RTP1YMR185W CDC28P00546 298 aaKnown RBP1.59□□□□□ -2.15
RTP1YMR185W OPI3P05375 206 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms