RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SSA3P09435 649 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C RPL2AP0CX45 254 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C RPL2BP0CX46 254 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C GRX2P17695 143 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C ERG24P32462 438 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C FIS1P40515 155 aa1.09□□□□□ -2.23
UBX4YMR067C RRP40Q08285 240 aaKnown RBP1.09□□□□□ -2.23
UBX4YMR067C SPA2P23201 1466 aaKnown RBP1.09□□□□□ -2.24
UBX4YMR067C SNA3P14359 133 aa1.08□□□□□ -2.24
UBX4YMR067C DAL80P26343 269 aa1.08□□□□□ -2.24
UBX4YMR067C QRI5P32344 111 aa1.08□□□□□ -2.24
UBX4YMR067C OST6Q03723 332 aa1.08□□□□□ -2.24
UBX4YMR067C ARR2Q06597 130 aa1.08□□□□□ -2.24
UBX4YMR067C COQ10Q08058 207 aa1.08□□□□□ -2.24
UBX4YMR067C RRS1Q08746 203 aaKnown RBP1.08□□□□□ -2.24
UBX4YMR067C UPS2P35200 230 aa1.07□□□□□ -2.24
UBX4YMR067C AGE2P40529 298 aa1.07□□□□□ -2.24
UBX4YMR067C YJR056CP47115 236 aa1.07□□□□□ -2.24
UBX4YMR067C TOS8P53147 276 aa1.07□□□□□ -2.24
UBX4YMR067C SML1Q04964 104 aa1.07□□□□□ -2.24
UBX4YMR067C YPR172WQ06608 200 aa1.07□□□□□ -2.24
UBX4YMR067C TY1B-DR4Q07793 1604 aa1.07□□□□□ -2.24
UBX4YMR067C MRPL39P36533 70 aa1.06□□□□□ -2.24
UBX4YMR067C MRX3P38172 270 aa1.06□□□□□ -2.24
UBX4YMR067C PRS2P38620 318 aaKnown RBP1.06□□□□□ -2.24
UBX4YMR067C YHR180WP38868 163 aa1.06□□□□□ -2.24
UBX4YMR067C PET100P38958 111 aa1.06□□□□□ -2.24
UBX4YMR067C SNZ3P43545 298 aa1.06□□□□□ -2.24
UBX4YMR067C SPG4Q04438 115 aa1.06□□□□□ -2.24
UBX4YMR067C TPO4Q12256 659 aa1.06□□□□□ -2.24
UBX4YMR067C COX2P00410 251 aa1.05□□□□□ -2.24
UBX4YMR067C PET9P18239 318 aaKnown RBP1.05□□□□□ -2.24
UBX4YMR067C EHD3P28817 500 aa1.05□□□□□ -2.24
UBX4YMR067C YPT52P36018 234 aaKnown RBP1.05□□□□□ -2.24
UBX4YMR067C RSM25P40496 264 aa1.05□□□□□ -2.24
UBX4YMR067C JHD2P47156 728 aaPredicted RBP1.05□□□□□ -2.24
UBX4YMR067C HEM25Q07534 307 aa1.05□□□□□ -2.24
UBX4YMR067C YOR186WQ08560 144 aa1.05□□□□□ -2.24
UBX4YMR067C YPL257WQ08974 193 aa1.05□□□□□ -2.24
UBX4YMR067C RPL24AP04449 155 aaKnown RBP1.04□□□□□ -2.24
UBX4YMR067C HOM6P31116 359 aaKnown RBP1.04□□□□□ -2.24
UBX4YMR067C JEN1P36035 616 aa1.04□□□□□ -2.24
UBX4YMR067C GOS1P38736 223 aa1.04□□□□□ -2.24
UBX4YMR067C SMB1P40018 196 aaKnown RBP1.04□□□□□ -2.24
UBX4YMR067C NUP57P48837 541 aa1.04□□□□□ -2.24
UBX4YMR067C ERV29P53337 310 aa1.04□□□□□ -2.24
UBX4YMR067C ALG11P53954 548 aaKnown RBP1.04□□□□□ -2.24
UBX4YMR067C ADH6Q04894 360 aaKnown RBP1.04□□□□□ -2.24
UBX4YMR067C YPR098CQ06089 161 aa1.04□□□□□ -2.24
UBX4YMR067C ATG39Q06159 398 aa1.04□□□□□ -2.24
UBX4YMR067C GPA2P10823 449 aa1.03□□□□□ -2.24
UBX4YMR067C YAR1P46683 200 aa1.03□□□□□ -2.24
UBX4YMR067C HTL1Q9URQ5 78 aa1.03□□□□□ -2.24
UBX4YMR067C FLO9P39712 1322 aa1.03□□□□□ -2.24
UBX4YMR067C MRP1P10662 321 aaKnown RBP1.02□□□□□ -2.25
UBX4YMR067C SGE1P33335 543 aa1.02□□□□□ -2.25
UBX4YMR067C TCD1P38756 429 aa1.02□□□□□ -2.25
UBX4YMR067C YAR068WP39564 161 aa1.02□□□□□ -2.25
UBX4YMR067C RPL33BP41056 107 aaKnown RBP1.02□□□□□ -2.25
UBX4YMR067C RPA43P46669 326 aa1.02□□□□□ -2.25
UBX4YMR067C HAM1P47119 197 aaKnown RBP1.02□□□□□ -2.25
UBX4YMR067C TCB3Q03640 1545 aaKnown RBP1.02□□□□□ -2.25
UBX4YMR067C YCT1Q12235 531 aa1.02□□□□□ -2.25
UBX4YMR067C VAR1P02381 398 aa1.01□□□□□ -2.25
UBX4YMR067C CPA1P07258 411 aaKnown RBP1.01□□□□□ -2.25
UBX4YMR067C RSR1P13856 272 aa1.01□□□□□ -2.25
UBX4YMR067C MEI4P29467 408 aa1.01□□□□□ -2.25
UBX4YMR067C RPF1P38805 295 aaKnown RBP1.01□□□□□ -2.25
UBX4YMR067C EMC2P47133 292 aaKnown RBP1.01□□□□□ -2.25
UBX4YMR067C ERV25P54837 211 aaKnown RBP1.01□□□□□ -2.25
UBX4YMR067C YOR020W-AQ3E824 90 aa1.01□□□□□ -2.25
UBX4YMR067C IPP1P00817 287 aaKnown RBP1□□□□□ -2.25
UBX4YMR067C DAL82P21705 255 aa1□□□□□ -2.25
UBX4YMR067C ICE2P40499 491 aa1□□□□□ -2.25
UBX4YMR067C USE1P53146 245 aa1□□□□□ -2.25
UBX4YMR067C SNZ2P53824 298 aa1□□□□□ -2.25
UBX4YMR067C YNL046WP53956 172 aa1□□□□□ -2.25
UBX4YMR067C YDR209CQ03480 137 aa1□□□□□ -2.25
UBX4YMR067C THO2P53552 1597 aaKnown RBP1□□□□□ -2.25
UBX4YMR067C REV3P14284 1504 aa0.99□□□□□ -2.25
UBX4YMR067C RNA15P25299 296 aaPredicted RBP0.99□□□□□ -2.25
UBX4YMR067C TMA19P35691 167 aaKnown RBP0.99□□□□□ -2.25
UBX4YMR067C YBR096WP38256 230 aa0.99□□□□□ -2.25
UBX4YMR067C TIR3P40552 269 aa0.99□□□□□ -2.25
UBX4YMR067C COX20Q04935 205 aa0.99□□□□□ -2.25
UBX4YMR067C CSM4Q08955 156 aa0.99□□□□□ -2.25
UBX4YMR067C ECM5Q03214 1411 aa0.98□□□□□ -2.25
UBX4YMR067C HIR3P47171 1648 aa0.98□□□□□ -2.25
UBX4YMR067C ECM33P38248 429 aaKnown RBP0.98□□□□□ -2.25
UBX4YMR067C ILM1P47155 203 aa0.98□□□□□ -2.25
UBX4YMR067C MPA43P53583 542 aaPredicted RBP0.98□□□□□ -2.25
UBX4YMR067C NIP7Q08962 181 aaKnown RBP0.98□□□□□ -2.25
UBX4YMR067C YPL162CQ12042 273 aa0.98□□□□□ -2.25
UBX4YMR067C BPT1P14772 1559 aa0.98□□□□□ -2.25
UBX4YMR067C HSL1P34244 1518 aa0.98□□□□□ -2.25
UBX4YMR067C MDS3P53094 1487 aa0.98□□□□□ -2.25
UBX4YMR067C PEP1P32319 1579 aa0.97□□□□□ -2.25
UBX4YMR067C ERD2P18414 219 aa0.97□□□□□ -2.25
UBX4YMR067C GLG2P47011 380 aa0.97□□□□□ -2.25
UBX4YMR067C BOL2P53082 120 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms