RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
SMD3YLR147C USE1P53146 245 aa1.76□□□□□ -2.13
SMD3YLR147C YGR219WP53307 113 aa1.76□□□□□ -2.13
SMD3YLR147C RNA15P25299 296 aaPredicted RBP1.75□□□□□ -2.13
SMD3YLR147C VMA11P32842 164 aa1.75□□□□□ -2.13
SMD3YLR147C YHR022CP38763 256 aa1.75□□□□□ -2.13
SMD3YLR147C BMT5P40493 336 aa1.75□□□□□ -2.13
SMD3YLR147C CIS3P47001 227 aa1.75□□□□□ -2.13
SMD3YLR147C MPP6P53725 186 aaPredicted RBP1.75□□□□□ -2.13
SMD3YLR147C CSM4Q08955 156 aa1.75□□□□□ -2.13
SMD3YLR147C YCT1Q12235 531 aa1.75□□□□□ -2.13
SMD3YLR147C RRP36Q12481 300 aaPredicted RBP1.75□□□□□ -2.13
SMD3YLR147C KOG1P38873 1557 aa1.74□□□□□ -2.13
SMD3YLR147C DDI2P0CH63 225 aa1.74□□□□□ -2.13
SMD3YLR147C DDI3P0CH64 225 aa1.74□□□□□ -2.13
SMD3YLR147C GRX2P17695 143 aaKnown RBP1.74□□□□□ -2.13
SMD3YLR147C OAC1P32332 324 aa1.74□□□□□ -2.13
SMD3YLR147C YPT52P36018 234 aaKnown RBP1.74□□□□□ -2.13
SMD3YLR147C RMR1P53060 241 aa1.74□□□□□ -2.13
SMD3YLR147C NEJ1Q06148 342 aa1.74□□□□□ -2.13
SMD3YLR147C ARR2Q06597 130 aa1.74□□□□□ -2.13
SMD3YLR147C RRS1Q08746 203 aaKnown RBP1.74□□□□□ -2.13
SMD3YLR147C YPL257WQ08974 193 aa1.74□□□□□ -2.13
SMD3YLR147C YPL229WQ99395 206 aa1.74□□□□□ -2.13
SMD3YLR147C SNA3P14359 133 aa1.73□□□□□ -2.13
SMD3YLR147C MDH2P22133 377 aa1.73□□□□□ -2.13
SMD3YLR147C RPS5P26783 225 aaKnown RBP1.73□□□□□ -2.13
SMD3YLR147C RIB7P33312 244 aa1.73□□□□□ -2.13
SMD3YLR147C ERV15P38312 142 aa1.73□□□□□ -2.13
SMD3YLR147C YHR180WP38868 163 aa1.73□□□□□ -2.13
SMD3YLR147C BFR1P38934 470 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SMD3YLR147C FIS1P40515 155 aa1.73□□□□□ -2.13
SMD3YLR147C RPA43P46669 326 aa1.73□□□□□ -2.13
SMD3YLR147C ERG25P53045 309 aa1.73□□□□□ -2.13
SMD3YLR147C KAP95Q06142 861 aaKnown RBP1.73□□□□□ -2.13
SMD3YLR147C BTS1Q12051 335 aa1.73□□□□□ -2.13
SMD3YLR147C DCN1Q12395 269 aa1.73□□□□□ -2.13
SMD3YLR147C RPL9AP05738 191 aaKnown RBP1.72□□□□□ -2.13
SMD3YLR147C ERD2P18414 219 aa1.72□□□□□ -2.13
SMD3YLR147C RPT5P33297 434 aaKnown RBP1.72□□□□□ -2.13
SMD3YLR147C YKL075CP36083 450 aa1.72□□□□□ -2.13
SMD3YLR147C DSE2P38844 325 aa1.72□□□□□ -2.13
SMD3YLR147C YKE4P40544 346 aa1.72□□□□□ -2.13
SMD3YLR147C GPI8P49018 411 aa1.72□□□□□ -2.13
SMD3YLR147C RPL9BP51401 191 aaKnown RBP1.72□□□□□ -2.13
SMD3YLR147C MSA1Q08471 629 aa1.72□□□□□ -2.13
SMD3YLR147C IPP1P00817 287 aaKnown RBP1.71□□□□□ -2.14
SMD3YLR147C MSW1P04803 379 aa1.71□□□□□ -2.14
SMD3YLR147C YHR127WP38833 243 aaKnown RBP1.71□□□□□ -2.14
SMD3YLR147C PRM10P42946 383 aa1.71□□□□□ -2.14
SMD3YLR147C JHD2P47156 728 aaPredicted RBP1.71□□□□□ -2.14
SMD3YLR147C RHO3Q00245 231 aaKnown RBP1.71□□□□□ -2.14
SMD3YLR147C SEI1Q06058 285 aa1.71□□□□□ -2.14
SMD3YLR147C ATG39Q06159 398 aa1.71□□□□□ -2.14
SMD3YLR147C HEM25Q07534 307 aa1.71□□□□□ -2.14
SMD3YLR147C NIP7Q08962 181 aaKnown RBP1.71□□□□□ -2.14
SMD3YLR147C MSH5Q12175 901 aa1.71□□□□□ -2.14
SMD3YLR147C YOR029WQ12243 111 aa1.71□□□□□ -2.14
SMD3YLR147C HTL1Q9URQ5 78 aa1.71□□□□□ -2.14
SMD3YLR147C YOL162WP0CF19 215 aa1.7□□□□□ -2.14
SMD3YLR147C RPF1P38805 295 aaKnown RBP1.7□□□□□ -2.14
SMD3YLR147C USB1Q12208 290 aaKnown RBP1.7□□□□□ -2.14
SMD3YLR147C YOL107WQ12239 342 aa1.7□□□□□ -2.14
SMD3YLR147C SNU23Q12368 194 aaPredicted RBP1.7□□□□□ -2.14
SMD3YLR147C YHR139C-AO13536 103 aa1.69□□□□□ -2.14
SMD3YLR147C RSR1P13856 272 aa1.69□□□□□ -2.14
SMD3YLR147C GLE2P40066 365 aa1.69□□□□□ -2.14
SMD3YLR147C YJR056CP47115 236 aa1.69□□□□□ -2.14
SMD3YLR147C YJR079WP47126 109 aa1.69□□□□□ -2.14
SMD3YLR147C TCP1P12612 559 aaKnown RBP1.68□□□□□ -2.14
SMD3YLR147C YKR045CP36138 183 aa1.68□□□□□ -2.14
SMD3YLR147C ECM33P38248 429 aaKnown RBP1.68□□□□□ -2.14
SMD3YLR147C AVT2P39981 480 aa1.68□□□□□ -2.14
SMD3YLR147C VTC1P40046 129 aaRIP-Chip data1.68□□□□□ -2.14not detected
SMD3YLR147C YNR062CP53748 327 aa1.68□□□□□ -2.14
SMD3YLR147C UBR2Q07963 1872 aa1.67□□□□□ -2.14
SMD3YLR147C SWR1Q05471 1514 aa1.67□□□□□ -2.14
SMD3YLR147C YBR219CP38317 127 aa1.67□□□□□ -2.14
SMD3YLR147C AGE2P40529 298 aa1.67□□□□□ -2.14
SMD3YLR147C YIL001WP40560 513 aa1.67□□□□□ -2.14
SMD3YLR147C CAT5P41735 233 aa1.67□□□□□ -2.14
SMD3YLR147C HOC1P47124 396 aa1.67□□□□□ -2.14
SMD3YLR147C TPO4Q12256 659 aa1.67□□□□□ -2.14
SMD3YLR147C YOR020W-AQ3E824 90 aa1.67□□□□□ -2.14
SMD3YLR147C YGL010WP25338 174 aa1.66□□□□□ -2.14
SMD3YLR147C SVP26P38869 228 aa1.66□□□□□ -2.14
SMD3YLR147C YAR068WP39564 161 aa1.66□□□□□ -2.14
SMD3YLR147C HAM1P47119 197 aaKnown RBP1.66□□□□□ -2.14
SMD3YLR147C RRT8Q08219 342 aa1.66□□□□□ -2.14
SMD3YLR147C FCY2P17064 533 aa1.65□□□□□ -2.15
SMD3YLR147C PET9P18239 318 aaKnown RBP1.65□□□□□ -2.15
SMD3YLR147C YBR220CP38318 560 aa1.65□□□□□ -2.15
SMD3YLR147C TOS8P53147 276 aa1.65□□□□□ -2.15
SMD3YLR147C BUD25P85052 153 aa1.65□□□□□ -2.15
SMD3YLR147C NUP49Q02199 472 aa1.65□□□□□ -2.15
SMD3YLR147C CSI2Q08054 341 aa1.65□□□□□ -2.15
SMD3YLR147C CYR1P08678 2026 aaKnown RBP1.64□□□□□ -2.15
SMD3YLR147C YLR126CQ12288 251 aa1.64□□□□□ -2.15
SMD3YLR147C ATG31Q12421 196 aa1.64□□□□□ -2.15
SMD3YLR147C YBR063CP38083 404 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 224.3 ms