RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W DAN1P47178 298 aa2.53□□□□□ -2
EBP2YKL172W PRM15Q03262 622 aa2.53□□□□□ -2
EBP2YKL172W ATG38Q05789 226 aaKnown RBP2.53□□□□□ -2
EBP2YKL172W RPB4P20433 221 aaPredicted RBP2.52□□□□□ -2.01
EBP2YKL172W YCR102CP25608 368 aa2.52□□□□□ -2.01
EBP2YKL172W ERG24P32462 438 aaKnown RBP2.52□□□□□ -2.01
EBP2YKL172W YHR125WP38831 101 aa2.52□□□□□ -2.01
EBP2YKL172W HOC1P47124 396 aa2.52□□□□□ -2.01
EBP2YKL172W YGL159WP53110 370 aa2.52□□□□□ -2.01
EBP2YKL172W INM2Q05533 292 aa2.52□□□□□ -2.01
EBP2YKL172W YPR172WQ06608 200 aa2.52□□□□□ -2.01
EBP2YKL172W CHD1P32657 1468 aa2.52□□□□□ -2.01
EBP2YKL172W YKL075CP36083 450 aa2.51□□□□□ -2.01
EBP2YKL172W HAM1P47119 197 aaKnown RBP2.51□□□□□ -2.01
EBP2YKL172W CGR1P53188 120 aa2.51□□□□□ -2.01
EBP2YKL172W GTR2P53290 341 aa2.51□□□□□ -2.01
EBP2YKL172W DAD3P69850 94 aa2.51□□□□□ -2.01
EBP2YKL172W SEI1Q06058 285 aa2.51□□□□□ -2.01
EBP2YKL172W YLR030WQ07967 263 aa2.51□□□□□ -2.01
EBP2YKL172W AKR2Q12013 749 aa2.51□□□□□ -2.01
EBP2YKL172W IPP1P00817 287 aaKnown RBP2.5□□□□□ -2.01
EBP2YKL172W YKT6P36015 200 aaKnown RBP2.5□□□□□ -2.01
EBP2YKL172W MSA2P36157 363 aa2.5□□□□□ -2.01
EBP2YKL172W TCD1P38756 429 aa2.5□□□□□ -2.01
EBP2YKL172W YMR144WP40214 342 aaKnown RBP2.5□□□□□ -2.01
EBP2YKL172W FIS1P40515 155 aa2.5□□□□□ -2.01
EBP2YKL172W ILM1P47155 203 aa2.5□□□□□ -2.01
EBP2YKL172W GIM3P53900 129 aa2.5□□□□□ -2.01
EBP2YKL172W YNL046WP53956 172 aa2.5□□□□□ -2.01
EBP2YKL172W PET117Q02771 107 aa2.5□□□□□ -2.01
EBP2YKL172W YPL257WQ08974 193 aa2.5□□□□□ -2.01
EBP2YKL172W COX5AP00424 153 aa2.49□□□□□ -2.01
EBP2YKL172W TCP1P12612 559 aaKnown RBP2.49□□□□□ -2.01
EBP2YKL172W MER1P16523 270 aa2.49□□□□□ -2.01
EBP2YKL172W RAD51P25454 400 aa2.49□□□□□ -2.01
EBP2YKL172W SRB4P32569 687 aa2.49□□□□□ -2.01
EBP2YKL172W DCR2Q05924 578 aa2.49□□□□□ -2.01
EBP2YKL172W ADF1Q2V2Q1 113 aa2.49□□□□□ -2.01
EBP2YKL172W HTL1Q9URQ5 78 aa2.49□□□□□ -2.01
EBP2YKL172W FKS1P38631 1876 aaKnown RBP2.49□□□□□ -2.01
EBP2YKL172W YHR032W-AP0C5N6 59 aa2.48□□□□□ -2.01
EBP2YKL172W ERD2P18414 219 aa2.48□□□□□ -2.01
EBP2YKL172W MRPL25P23369 157 aa2.48□□□□□ -2.01
EBP2YKL172W DOA4P32571 926 aa2.48□□□□□ -2.01
EBP2YKL172W YLR283WQ05867 314 aa2.48□□□□□ -2.01
EBP2YKL172W DSF1P0CX08 502 aa2.47□□□□□ -2.01
EBP2YKL172W YNR073CP0CX09 502 aa2.47□□□□□ -2.01
EBP2YKL172W YPT52P36018 234 aaKnown RBP2.47□□□□□ -2.01
EBP2YKL172W CUE1P38428 203 aa2.47□□□□□ -2.01
EBP2YKL172W DOG1P38774 246 aa2.47□□□□□ -2.01
EBP2YKL172W SMD3P43321 101 aaKnown RBP2.47□□□□□ -2.01
EBP2YKL172W YJL027CP47063 138 aaPredicted RBP2.47□□□□□ -2.01
EBP2YKL172W YJR056CP47115 236 aa2.47□□□□□ -2.01
EBP2YKL172W YLR126CQ12288 251 aa2.47□□□□□ -2.01
EBP2YKL172W YOR020W-AQ3E824 90 aa2.47□□□□□ -2.01
EBP2YKL172W RPL9AP05738 191 aaKnown RBP2.46□□□□□ -2.02
EBP2YKL172W SNA3P14359 133 aa2.46□□□□□ -2.02
EBP2YKL172W YCR016WP25617 290 aaKnown RBP2.46□□□□□ -2.02
EBP2YKL172W VMA11P32842 164 aa2.46□□□□□ -2.02
EBP2YKL172W RPL9BP51401 191 aaKnown RBP2.46□□□□□ -2.02
EBP2YKL172W JIP3O13555 125 aa2.45□□□□□ -2.02
EBP2YKL172W KSS1P14681 368 aa2.45□□□□□ -2.02
EBP2YKL172W ARC19P33204 171 aaKnown RBP2.45□□□□□ -2.02
EBP2YKL172W LDB7P38210 180 aa2.45□□□□□ -2.02
EBP2YKL172W RSM25P40496 264 aa2.45□□□□□ -2.02
EBP2YKL172W PGA2P53903 129 aa2.45□□□□□ -2.02
EBP2YKL172W YML108WQ03759 105 aa2.45□□□□□ -2.02
EBP2YKL172W YHR086W-AQ3E746 53 aa2.45□□□□□ -2.02
EBP2YKL172W BOL1Q3E793 110 aa2.45□□□□□ -2.02
EBP2YKL172W SIR4P11978 1358 aa2.45□□□□□ -2.02
EBP2YKL172W FBA1P14540 359 aaKnown RBP2.44□□□□□ -2.02
EBP2YKL172W RPO26P20435 155 aa2.44□□□□□ -2.02
EBP2YKL172W PEX4P29340 183 aa2.44□□□□□ -2.02
EBP2YKL172W MSN4P33749 630 aa2.44□□□□□ -2.02
EBP2YKL172W BMH2P34730 273 aaKnown RBP2.44□□□□□ -2.02
EBP2YKL172W RPF1P38805 295 aaKnown RBP2.44□□□□□ -2.02
EBP2YKL172W YAR068WP39564 161 aa2.44□□□□□ -2.02
EBP2YKL172W FCY21P40039 528 aa2.44□□□□□ -2.02
EBP2YKL172W YER085CP40058 173 aa2.44□□□□□ -2.02
EBP2YKL172W MSS2P40990 351 aa2.44□□□□□ -2.02
EBP2YKL172W MCM22P47167 239 aa2.44□□□□□ -2.02
EBP2YKL172W SSQ1Q05931 657 aaPredicted RBP2.44□□□□□ -2.02
EBP2YKL172W ATG39Q06159 398 aa2.44□□□□□ -2.02
EBP2YKL172W MDH3P32419 343 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
EBP2YKL172W SIP3P38717 1229 aa2.43□□□□□ -2.02
EBP2YKL172W CTR2P38865 189 aa2.43□□□□□ -2.02
EBP2YKL172W YER034WP40022 185 aaKnown RBP2.43□□□□□ -2.02
EBP2YKL172W RTR1P40084 226 aaPredicted RBP2.43□□□□□ -2.02
EBP2YKL172W CAT5P41735 233 aa2.43□□□□□ -2.02
EBP2YKL172W ABF2Q02486 183 aa2.43□□□□□ -2.02
EBP2YKL172W MRPS17Q03246 237 aaPredicted RBP2.43□□□□□ -2.02
EBP2YKL172W ATO3Q12359 275 aa2.43□□□□□ -2.02
EBP2YKL172W OTU1P43558 301 aa2.42□□□□□ -2.02
EBP2YKL172W RPA43P46669 326 aa2.42□□□□□ -2.02
EBP2YKL172W BAT2P47176 376 aaKnown RBP2.42□□□□□ -2.02
EBP2YKL172W RAD17P48581 401 aa2.42□□□□□ -2.02
EBP2YKL172W HOP2P53187 214 aa2.42□□□□□ -2.02
EBP2YKL172W YML096WQ04489 525 aa2.42□□□□□ -2.02
EBP2YKL172W NIP7Q08962 181 aaKnown RBP2.42□□□□□ -2.02
EBP2YKL172W MSW1P04803 379 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms