RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C TY1B-NL2Q99337 1749 aaKnown RBP2.05□□□□□ -2.08
CTK2YJL006C MRPL49P40858 161 aaPredicted RBP2.04□□□□□ -2.08
CTK2YJL006C TRM3Q07527 1436 aa2.04□□□□□ -2.08
CTK2YJL006C RRT8Q08219 342 aa2.04□□□□□ -2.08
CTK2YJL006C YBL008W-AQ3E821 79 aa2.04□□□□□ -2.08
CTK2YJL006C TY3B-GQ99315 1547 aa2.03□□□□□ -2.08
CTK2YJL006C SMC4Q12267 1418 aa2.03□□□□□ -2.08
CTK2YJL006C MSF1P08425 469 aa2.03□□□□□ -2.08
CTK2YJL006C JEN1P36035 616 aa2.03□□□□□ -2.08
CTK2YJL006C YGP1P38616 354 aaKnown RBP2.03□□□□□ -2.08
CTK2YJL006C YHL026CP38740 315 aa2.03□□□□□ -2.08
CTK2YJL006C NUP84P52891 726 aa2.03□□□□□ -2.08
CTK2YJL006C RSM10Q03201 203 aa2.03□□□□□ -2.08
CTK2YJL006C PEX12Q04370 399 aa2.03□□□□□ -2.08
CTK2YJL006C BTS1Q12051 335 aa2.03□□□□□ -2.08
CTK2YJL006C YPR011CQ12251 326 aa2.03□□□□□ -2.08
CTK2YJL006C EMP46Q12396 444 aa2.03□□□□□ -2.08
CTK2YJL006C TY2B-BQ12491 1770 aa2.03□□□□□ -2.09
CTK2YJL006C SGA1P08019 549 aa2.02□□□□□ -2.09
CTK2YJL006C RSR1P13856 272 aa2.02□□□□□ -2.09
CTK2YJL006C EHD3P28817 500 aa2.02□□□□□ -2.09
CTK2YJL006C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
CTK2YJL006C MRX3P38172 270 aa2.02□□□□□ -2.09
CTK2YJL006C SMB1P40018 196 aaKnown RBP2.02□□□□□ -2.09
CTK2YJL006C OST2P46964 130 aa2.02□□□□□ -2.09
CTK2YJL006C LIA1P47120 325 aaKnown RBP2.02□□□□□ -2.09
CTK2YJL006C YGL034CP53186 121 aa2.02□□□□□ -2.09
CTK2YJL006C ATG17Q06410 417 aa2.02□□□□□ -2.09
CTK2YJL006C SDO1Q07953 250 aaKnown RBP2.02□□□□□ -2.09
CTK2YJL006C MED4Q12343 284 aa2.02□□□□□ -2.09
CTK2YJL006C SAS5Q99314 248 aa2.02□□□□□ -2.09
CTK2YJL006C TOP2P06786 1428 aaKnown RBP2.01□□□□□ -2.09
CTK2YJL006C SSN2P38931 1420 aa2.01□□□□□ -2.09
CTK2YJL006C SNT2P53127 1403 aa2.01□□□□□ -2.09
CTK2YJL006C SCO1P23833 295 aa2.01□□□□□ -2.09
CTK2YJL006C SCM4P32564 187 aa2.01□□□□□ -2.09
CTK2YJL006C SSH1P38353 490 aaKnown RBP2.01□□□□□ -2.09
CTK2YJL006C YAP3P38749 330 aa2.01□□□□□ -2.09
CTK2YJL006C BIG1P38813 335 aa2.01□□□□□ -2.09
CTK2YJL006C ASI3P53983 676 aa2.01□□□□□ -2.09
CTK2YJL006C TIM11P81449 96 aaPredicted RBP2.01□□□□□ -2.09
CTK2YJL006C YDR209CQ03480 137 aa2.01□□□□□ -2.09
CTK2YJL006C YLR173WQ06247 608 aa2.01□□□□□ -2.09
CTK2YJL006C YPR147CQ06522 304 aaKnown RBP2.01□□□□□ -2.09
CTK2YJL006C COQ10Q08058 207 aa2.01□□□□□ -2.09
CTK2YJL006C BUD3P25558 1636 aa2.01□□□□□ -2.09
CTK2YJL006C MYO4P32492 1471 aa2.01□□□□□ -2.09
CTK2YJL006C SNF2P22082 1703 aa2□□□□□ -2.09
CTK2YJL006C HOM6P31116 359 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C RCN1P36054 211 aa2□□□□□ -2.09
CTK2YJL006C PRS4P38063 326 aaPredicted RBP2□□□□□ -2.09
CTK2YJL006C THO1P40040 218 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C YER189WP40104 122 aa2□□□□□ -2.09
CTK2YJL006C SNZ3P43545 298 aa2□□□□□ -2.09
CTK2YJL006C GLG2P47011 380 aa2□□□□□ -2.09
CTK2YJL006C DAN1P47178 298 aa2□□□□□ -2.09
CTK2YJL006C MRH4P53166 561 aa2□□□□□ -2.09
CTK2YJL006C YDR124WQ04608 324 aa2□□□□□ -2.09
CTK2YJL006C RNH1Q04740 348 aa2□□□□□ -2.09
CTK2YJL006C RUD3Q12234 484 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C YOL107WQ12239 342 aa2□□□□□ -2.09
CTK2YJL006C EMC6Q12431 108 aa2□□□□□ -2.09
CTK2YJL006C IML1P47170 1584 aa2□□□□□ -2.09
CTK2YJL006C TY1B-JR2P47100 1755 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C TY1B-ER2Q03619 1755 aa2□□□□□ -2.09
CTK2YJL006C TY1B-MR1Q04214 1755 aa2□□□□□ -2.09
CTK2YJL006C TY1B-MR2Q04670 1755 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C TY1B-LR1Q12088 1755 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C TY1B-NL1Q12112 1755 aa2□□□□□ -2.09
CTK2YJL006C TY1B-GR1Q12141 1755 aa2□□□□□ -2.09
CTK2YJL006C TY1B-BLQ12490 1755 aa2□□□□□ -2.09
CTK2YJL006C SEC7P11075 2009 aaKnown RBP2□□□□□ -2.09
CTK2YJL006C YSP2Q06681 1438 aa2□□□□□ -2.09
CTK2YJL006C YBT1P32386 1661 aa1.99□□□□□ -2.09
CTK2YJL006C BEM2P39960 2167 aaKnown RBP1.99□□□□□ -2.09
CTK2YJL006C CCA1P21269 546 aa1.99□□□□□ -2.09
CTK2YJL006C RPT5P33297 434 aaKnown RBP1.99□□□□□ -2.09
CTK2YJL006C GRE3P38715 327 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
CTK2YJL006C IRA2P19158 3079 aa1.99□□□□□ -2.09
CTK2YJL006C PDR5P33302 1511 aaKnown RBP1.98□□□□□ -2.09
CTK2YJL006C YLR462WO13556 202 aa1.98□□□□□ -2.09
CTK2YJL006C YKR104WP0CE69 306 aa1.98□□□□□ -2.09
CTK2YJL006C SEC22P22214 214 aa1.98□□□□□ -2.09
CTK2YJL006C RNA15P25299 296 aaPredicted RBP1.98□□□□□ -2.09
CTK2YJL006C NRG2P38082 220 aa1.98□□□□□ -2.09
CTK2YJL006C YBR096WP38256 230 aa1.98□□□□□ -2.09
CTK2YJL006C COS8P38723 381 aa1.98□□□□□ -2.09
CTK2YJL006C YEL075CP39972 122 aa1.98□□□□□ -2.09
CTK2YJL006C SNZ2P53824 298 aa1.98□□□□□ -2.09
CTK2YJL006C CTF19Q02732 369 aa1.98□□□□□ -2.09
CTK2YJL006C PET117Q02771 107 aa1.98□□□□□ -2.09
CTK2YJL006C SRL4Q03085 281 aa1.98□□□□□ -2.09
CTK2YJL006C GOT1Q03554 138 aa1.98□□□□□ -2.09
CTK2YJL006C DCR2Q05924 578 aa1.98□□□□□ -2.09
CTK2YJL006C YPR098CQ06089 161 aa1.98□□□□□ -2.09
CTK2YJL006C SYC1Q08553 188 aaPredicted RBP1.98□□□□□ -2.09
CTK2YJL006C IRA1P18963 3092 aa1.98□□□□□ -2.09
CTK2YJL006C YCR102CP25608 368 aa1.97□□□□□ -2.09
CTK2YJL006C YOR062CP36025 268 aa1.97□□□□□ -2.09
CTK2YJL006C FZO1P38297 855 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms