RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C CBP6P07253 162 aaPredicted RBP6.66□□□□□ -1.34
SNP1YIL061C YBL010CP32788 280 aa6.66□□□□□ -1.34
SNP1YIL061C OSH7P38755 437 aa6.66□□□□□ -1.34
SNP1YIL061C ATF1P40353 525 aa6.66□□□□□ -1.34
SNP1YIL061C YIL169CP40442 995 aa6.66□□□□□ -1.34
SNP1YIL061C TNA1P53322 534 aa6.66□□□□□ -1.34
SNP1YIL061C TIM44Q01852 431 aa6.66□□□□□ -1.34
SNP1YIL061C SPR28Q04921 423 aa6.66□□□□□ -1.34
SNP1YIL061C COQ11Q05892 277 aa6.66□□□□□ -1.34
SNP1YIL061C GRC3Q07845 632 aa6.66□□□□□ -1.34
SNP1YIL061C SCP1Q08873 200 aa6.66□□□□□ -1.34
SNP1YIL061C Q0144Q9ZZW2 109 aa6.66□□□□□ -1.34
SNP1YIL061C SEC16P48415 2195 aaKnown RBP6.66□□□□□ -1.34
SNP1YIL061C TPI1P00942 248 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C GAL1P04385 528 aa6.65□□□□□ -1.34
SNP1YIL061C SEC62P21825 274 aa6.65□□□□□ -1.34
SNP1YIL061C MIR1P23641 311 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C PEX4P29340 183 aa6.65□□□□□ -1.34
SNP1YIL061C YBR197CP38306 217 aa6.65□□□□□ -1.34
SNP1YIL061C YND1P40009 630 aa6.65□□□□□ -1.34
SNP1YIL061C GLR1P41921 483 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C GNA1P43577 159 aaPredicted RBP6.65□□□□□ -1.34
SNP1YIL061C IKS1P47042 667 aa6.65□□□□□ -1.34
SNP1YIL061C YJL016WP47072 561 aa6.65□□□□□ -1.34
SNP1YIL061C YJR111CP47148 283 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C UBP8P50102 471 aa6.65□□□□□ -1.34
SNP1YIL061C HRI1Q05905 244 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C NOC4Q06512 552 aaPredicted RBP6.65□□□□□ -1.34
SNP1YIL061C USB1Q12208 290 aaKnown RBP6.65□□□□□ -1.34
SNP1YIL061C IZH2Q12442 317 aa6.65□□□□□ -1.34
SNP1YIL061C SRY1P36007 326 aa6.64□□□□□ -1.35
SNP1YIL061C MRPL39P36533 70 aa6.64□□□□□ -1.35
SNP1YIL061C ALG9P53868 555 aaKnown RBP6.64□□□□□ -1.35
SNP1YIL061C INN1P53901 409 aa6.64□□□□□ -1.35
SNP1YIL061C MRP51Q02950 344 aa6.64□□□□□ -1.35
SNP1YIL061C YML108WQ03759 105 aa6.64□□□□□ -1.35
SNP1YIL061C CAB5Q03941 241 aa6.64□□□□□ -1.35
SNP1YIL061C YDR391CQ04170 232 aa6.64□□□□□ -1.35
SNP1YIL061C RTT103Q05543 409 aa6.64□□□□□ -1.35
SNP1YIL061C YDL086WQ07505 273 aa6.64□□□□□ -1.35
SNP1YIL061C THI72Q08579 599 aa6.64□□□□□ -1.35
SNP1YIL061C VAM3Q12241 283 aa6.64□□□□□ -1.35
SNP1YIL061C YLR108CQ12259 485 aa6.64□□□□□ -1.35
SNP1YIL061C HUT1Q12520 339 aa6.64□□□□□ -1.35
SNP1YIL061C ISN1Q99312 450 aa6.64□□□□□ -1.35
SNP1YIL061C UBA3Q99344 299 aa6.64□□□□□ -1.35
SNP1YIL061C FAT1P38225 669 aa6.63□□□□□ -1.35
SNP1YIL061C ASP1P38986 381 aaPredicted RBP6.63□□□□□ -1.35
SNP1YIL061C GCV3P39726 170 aaPredicted RBP6.63□□□□□ -1.35
SNP1YIL061C UFD1P53044 361 aa6.63□□□□□ -1.35
SNP1YIL061C TIM11P81449 96 aaPredicted RBP6.63□□□□□ -1.35
SNP1YIL061C YAP6Q03935 383 aa6.63□□□□□ -1.35
SNP1YIL061C THI74Q04083 370 aa6.63□□□□□ -1.35
SNP1YIL061C RFU1Q08003 200 aa6.63□□□□□ -1.35
SNP1YIL061C YDL180WQ12301 547 aa6.63□□□□□ -1.35
SNP1YIL061C EAF3Q12432 401 aa6.63□□□□□ -1.35
SNP1YIL061C YJR112W-AQ3E743 109 aa6.63□□□□□ -1.35
SNP1YIL061C QCR2P07257 368 aa6.62□□□□□ -1.35
SNP1YIL061C FUS3P16892 353 aaKnown RBP6.62□□□□□ -1.35
SNP1YIL061C TIP1P27654 210 aaPredicted RBP6.62□□□□□ -1.35
SNP1YIL061C REC114P32841 428 aa6.62□□□□□ -1.35
SNP1YIL061C PDC2P32896 925 aa6.62□□□□□ -1.35
SNP1YIL061C KAE1P36132 386 aa6.62□□□□□ -1.35
SNP1YIL061C LAG1P38703 411 aa6.62□□□□□ -1.35
SNP1YIL061C MTC6P38849 526 aa6.62□□□□□ -1.35
SNP1YIL061C SSO2P39926 295 aa6.62□□□□□ -1.35
SNP1YIL061C YIR035CP40579 254 aa6.62□□□□□ -1.35
SNP1YIL061C YHC3P47040 408 aa6.62□□□□□ -1.35
SNP1YIL061C YJR011CP47086 261 aaPredicted RBP6.62□□□□□ -1.35
SNP1YIL061C SSN8P47821 323 aa6.62□□□□□ -1.35
SNP1YIL061C PNC1P53184 216 aaKnown RBP6.62□□□□□ -1.35
SNP1YIL061C YNR040WP53736 256 aa6.62□□□□□ -1.35
SNP1YIL061C SRP1Q02821 542 aaKnown RBP6.62□□□□□ -1.35
SNP1YIL061C YCT1Q12235 531 aa6.62□□□□□ -1.35
SNP1YIL061C MED4Q12343 284 aa6.62□□□□□ -1.35
SNP1YIL061C REP2P03872 296 aa6.61□□□□□ -1.35
SNP1YIL061C RPP1AP05318 106 aaPredicted RBP6.61□□□□□ -1.35
SNP1YIL061C RPB10P22139 70 aa6.61□□□□□ -1.35
SNP1YIL061C YCR101CP25607 182 aa6.61□□□□□ -1.35
SNP1YIL061C ATG15P25641 520 aa6.61□□□□□ -1.35
SNP1YIL061C DEG1P31115 442 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C RPD3P32561 433 aa6.61□□□□□ -1.35
SNP1YIL061C FIG1P38224 298 aa6.61□□□□□ -1.35
SNP1YIL061C LSM12P38828 187 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C RPL13BP40212 199 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C SEC24P40482 926 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C SRB7P47822 140 aa6.61□□□□□ -1.35
SNP1YIL061C ACT1P60010 375 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C HAS1Q03532 505 aaKnown RBP6.61□□□□□ -1.35
SNP1YIL061C RPL13AQ12690 199 aaPredicted RBP6.61□□□□□ -1.35
SNP1YIL061C SPS4P09937 338 aa6.6□□□□□ -1.35
SNP1YIL061C SAG1P20840 650 aa6.6□□□□□ -1.35
SNP1YIL061C VMA3P25515 160 aa6.6□□□□□ -1.35
SNP1YIL061C CDC39P25655 2108 aaKnown RBP6.6□□□□□ -1.35
SNP1YIL061C OCH1P31755 480 aa6.6□□□□□ -1.35
SNP1YIL061C MRPS5P33759 307 aa6.6□□□□□ -1.35
SNP1YIL061C ARC40P38328 384 aaKnown RBP6.6□□□□□ -1.35
SNP1YIL061C COS8P38723 381 aa6.6□□□□□ -1.35
SNP1YIL061C POP2P39008 433 aa6.6□□□□□ -1.35
SNP1YIL061C CCS1P40202 249 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms