RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W QCR2P07257 368 aa5.89□□□□□ -1.47
RGD2YFL047W NAM2P11325 894 aa5.89□□□□□ -1.47
RGD2YFL047W MRS4P23500 304 aa5.89□□□□□ -1.47
RGD2YFL047W IFM1P25038 676 aa5.89□□□□□ -1.47
RGD2YFL047W APD1P38281 316 aa5.89□□□□□ -1.47
RGD2YFL047W POG1P40473 351 aa5.89□□□□□ -1.47
RGD2YFL047W SOL1P50278 321 aa5.89□□□□□ -1.47
RGD2YFL047W SKO1Q02100 647 aa5.89□□□□□ -1.47
RGD2YFL047W VAM3Q12241 283 aa5.89□□□□□ -1.47
RGD2YFL047W SWM1Q12379 170 aa5.89□□□□□ -1.47
RGD2YFL047W WHI5Q12416 295 aa5.89□□□□□ -1.47
RGD2YFL047W MIR1P23641 311 aaKnown RBP5.89□□□□□ -1.47
RGD2YFL047W FIG1P38224 298 aa5.89□□□□□ -1.47
RGD2YFL047W YEA6P39953 335 aa5.89□□□□□ -1.47
RGD2YFL047W YJR056CP47115 236 aa5.89□□□□□ -1.47
RGD2YFL047W PMT3P47190 753 aa5.89□□□□□ -1.47
RGD2YFL047W SSN8P47821 323 aa5.89□□□□□ -1.47
RGD2YFL047W RDL2Q08742 149 aaKnown RBP5.89□□□□□ -1.47
RGD2YFL047W REX3Q12090 404 aa5.89□□□□□ -1.47
RGD2YFL047W YCT1Q12235 531 aa5.89□□□□□ -1.47
RGD2YFL047W ISA2Q12425 185 aa5.89□□□□□ -1.47
RGD2YFL047W UBA3Q99344 299 aa5.89□□□□□ -1.47
RGD2YFL047W YAL064W-BO13512 126 aa5.88□□□□□ -1.47
RGD2YFL047W MES1P00958 751 aaKnown RBP5.88□□□□□ -1.47
RGD2YFL047W SCEIP03882 235 aa5.88□□□□□ -1.47
RGD2YFL047W YML003WP0CF16 290 aa5.88□□□□□ -1.47
RGD2YFL047W RFA3P26755 122 aaKnown RBP5.88□□□□□ -1.47
RGD2YFL047W AIR1P40507 360 aaKnown RBP5.88□□□□□ -1.47
RGD2YFL047W ERP1Q05359 219 aaKnown RBP5.88□□□□□ -1.47
RGD2YFL047W YDL086WQ07505 273 aa5.88□□□□□ -1.47
RGD2YFL047W YIL046W-AQ3E7Z4 54 aa5.88□□□□□ -1.47
RGD2YFL047W YHR214C-EQ8TGK0 99 aa5.88□□□□□ -1.47
RGD2YFL047W OLE1P21147 510 aaKnown RBP5.87□□□□□ -1.47
RGD2YFL047W ATG8P38182 117 aaRIP-Chip data5.87□□□□□ -1.47not detected
RGD2YFL047W FAT1P38225 669 aa5.87□□□□□ -1.47
RGD2YFL047W GTT1P40582 234 aa5.87□□□□□ -1.47
RGD2YFL047W YJR011CP47086 261 aaPredicted RBP5.87□□□□□ -1.47
RGD2YFL047W UFD1P53044 361 aa5.87□□□□□ -1.47
RGD2YFL047W LCL3P53153 274 aa5.87□□□□□ -1.47
RGD2YFL047W PKP2P53170 491 aa5.87□□□□□ -1.47
RGD2YFL047W GPI15P53961 229 aa5.87□□□□□ -1.47
RGD2YFL047W PAR32Q12515 295 aaKnown RBP5.87□□□□□ -1.47
RGD2YFL047W COX19Q3E731 98 aa5.87□□□□□ -1.47
RGD2YFL047W COX5BP00425 151 aa5.87□□□□□ -1.47
RGD2YFL047W SNF5P18480 905 aa5.87□□□□□ -1.47
RGD2YFL047W AFG1P32317 509 aa5.87□□□□□ -1.47
RGD2YFL047W MKK2P32491 506 aa5.87□□□□□ -1.47
RGD2YFL047W SHM2P37291 469 aaKnown RBP5.87□□□□□ -1.47
RGD2YFL047W YHR210CP38893 341 aa5.87□□□□□ -1.47
RGD2YFL047W RFC2P40348 353 aa5.87□□□□□ -1.47
RGD2YFL047W ATF1P40353 525 aa5.87□□□□□ -1.47
RGD2YFL047W GWT1P47026 490 aa5.87□□□□□ -1.47
RGD2YFL047W MOG1P47123 218 aa5.87□□□□□ -1.47
RGD2YFL047W VPS28Q02767 242 aa5.87□□□□□ -1.47
RGD2YFL047W SRP1Q02821 542 aaKnown RBP5.87□□□□□ -1.47
RGD2YFL047W TPP1Q03796 238 aa5.87□□□□□ -1.47
RGD2YFL047W YMR253CQ04835 414 aa5.87□□□□□ -1.47
RGD2YFL047W BDS1Q08347 646 aa5.87□□□□□ -1.47
RGD2YFL047W HNT3Q08702 217 aa5.87□□□□□ -1.47
RGD2YFL047W YLL053CP0CD98 152 aa5.86□□□□□ -1.47
RGD2YFL047W YBR197CP38306 217 aa5.86□□□□□ -1.47
RGD2YFL047W SPC25P40014 221 aa5.86□□□□□ -1.47
RGD2YFL047W CTK2P46962 323 aa5.86□□□□□ -1.47
RGD2YFL047W NIT2P47016 307 aa5.86□□□□□ -1.47
RGD2YFL047W BSC5P53755 489 aa5.86□□□□□ -1.47
RGD2YFL047W ADD37Q03233 198 aa5.86□□□□□ -1.47
RGD2YFL047W YPD1Q07688 167 aa5.86□□□□□ -1.47
RGD2YFL047W ZEO1Q08245 113 aa5.86□□□□□ -1.47
RGD2YFL047W DGK1Q12382 290 aa5.86□□□□□ -1.47
RGD2YFL047W GAL1P04385 528 aa5.86□□□□□ -1.47
RGD2YFL047W MET3P08536 511 aa5.86□□□□□ -1.47
RGD2YFL047W YFR010W-AP0C5N0 62 aa5.86□□□□□ -1.47
RGD2YFL047W ARC40P38328 384 aaKnown RBP5.86□□□□□ -1.47
RGD2YFL047W HSV2P50079 448 aaPredicted RBP5.86□□□□□ -1.47
RGD2YFL047W SKP1P52286 194 aa5.86□□□□□ -1.47
RGD2YFL047W NSA1P53136 463 aaPredicted RBP5.86□□□□□ -1.47
RGD2YFL047W HAS1Q03532 505 aaKnown RBP5.86□□□□□ -1.47
RGD2YFL047W LRS4Q04087 347 aaKnown RBP5.86□□□□□ -1.47
RGD2YFL047W NIP7Q08962 181 aaKnown RBP5.86□□□□□ -1.47
RGD2YFL047W CDC36P06100 191 aaPredicted RBP5.85□□□□□ -1.47
RGD2YFL047W YEA4P40004 342 aa5.85□□□□□ -1.47
RGD2YFL047W YER010CP40011 234 aa5.85□□□□□ -1.47
RGD2YFL047W YER158CP40095 573 aa5.85□□□□□ -1.47
RGD2YFL047W RPL13BP40212 199 aaKnown RBP5.85□□□□□ -1.47
RGD2YFL047W GPP1P41277 250 aaKnown RBP5.85□□□□□ -1.47
RGD2YFL047W VMA21P41806 77 aa5.85□□□□□ -1.47
RGD2YFL047W MOB2P43563 287 aa5.85□□□□□ -1.47
RGD2YFL047W DAN1P47178 298 aa5.85□□□□□ -1.47
RGD2YFL047W AVT4P50944 713 aa5.85□□□□□ -1.47
RGD2YFL047W MRPL22P53881 309 aa5.85□□□□□ -1.47
RGD2YFL047W GIS1Q03833 894 aa5.85□□□□□ -1.47
RGD2YFL047W FIT1Q04433 528 aa5.85□□□□□ -1.47
RGD2YFL047W TGS1Q12052 315 aa5.85□□□□□ -1.47
RGD2YFL047W RPL13AQ12690 199 aaPredicted RBP5.85□□□□□ -1.47
RGD2YFL047W RPB3P16370 318 aaKnown RBP5.84□□□□□ -1.47
RGD2YFL047W CLB6P32943 380 aa5.84□□□□□ -1.47
RGD2YFL047W SWD2P36104 329 aaPredicted RBP5.84□□□□□ -1.47
RGD2YFL047W AIM3P38266 947 aaKnown RBP5.84□□□□□ -1.47
RGD2YFL047W YND1P40009 630 aa5.84□□□□□ -1.47
RGD2YFL047W XBP1P40489 647 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms