RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C EMC5P40540 141 aa5.71□□□□□ -1.5
YPT1YFL038C CUP9P41817 306 aa5.71□□□□□ -1.5
YPT1YFL038C MOB2P43563 287 aa5.71□□□□□ -1.5
YPT1YFL038C AGX1P43567 385 aa5.71□□□□□ -1.5
YPT1YFL038C MRX5P47007 382 aa5.71□□□□□ -1.5
YPT1YFL038C NIT2P47016 307 aa5.71□□□□□ -1.5
YPT1YFL038C PMT3P47190 753 aa5.71□□□□□ -1.5
YPT1YFL038C UFD1P53044 361 aa5.71□□□□□ -1.5
YPT1YFL038C APJ1P53940 528 aa5.71□□□□□ -1.5
YPT1YFL038C ERV25P54837 211 aaKnown RBP5.71□□□□□ -1.5
YPT1YFL038C DIG2Q03373 323 aaKnown RBP5.71□□□□□ -1.5
YPT1YFL038C CGI121Q03705 181 aaKnown RBP5.71□□□□□ -1.5
YPT1YFL038C YDR102CQ03864 110 aa5.71□□□□□ -1.5
YPT1YFL038C THI74Q04083 370 aa5.71□□□□□ -1.5
YPT1YFL038C MRX9Q07349 420 aaKnown RBP5.71□□□□□ -1.5
YPT1YFL038C YDL086WQ07505 273 aa5.71□□□□□ -1.5
YPT1YFL038C ERP4Q12450 207 aa5.71□□□□□ -1.5
YPT1YFL038C UBA3Q99344 299 aa5.71□□□□□ -1.5
YPT1YFL038C IPP1P00817 287 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C MES1P00958 751 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C RPP2BP02400 110 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C MSK1P32048 576 aa5.7□□□□□ -1.5
YPT1YFL038C FAT1P38225 669 aa5.7□□□□□ -1.5
YPT1YFL038C YBR197CP38306 217 aa5.7□□□□□ -1.5
YPT1YFL038C SHG1P38337 142 aa5.7□□□□□ -1.5
YPT1YFL038C SHO1P40073 367 aa5.7□□□□□ -1.5
YPT1YFL038C POG1P40473 351 aa5.7□□□□□ -1.5
YPT1YFL038C GPP1P41277 250 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C GNA1P43577 159 aaPredicted RBP5.7□□□□□ -1.5
YPT1YFL038C CTK2P46962 323 aa5.7□□□□□ -1.5
YPT1YFL038C GWT1P47026 490 aa5.7□□□□□ -1.5
YPT1YFL038C YJR011CP47086 261 aaPredicted RBP5.7□□□□□ -1.5
YPT1YFL038C MSY1P48527 492 aa5.7□□□□□ -1.5
YPT1YFL038C AVT4P50944 713 aa5.7□□□□□ -1.5
YPT1YFL038C NSA1P53136 463 aaPredicted RBP5.7□□□□□ -1.5
YPT1YFL038C GPI15P53961 229 aa5.7□□□□□ -1.5
YPT1YFL038C SRP1Q02821 542 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C YLR456WQ06199 204 aa5.7□□□□□ -1.5
YPT1YFL038C FCF2Q12035 217 aaPredicted RBP5.7□□□□□ -1.5
YPT1YFL038C YOR032W-AQ8TGS1 66 aa5.7□□□□□ -1.5
YPT1YFL038C POL2P21951 2222 aaKnown RBP5.7□□□□□ -1.5
YPT1YFL038C TY1A-DR4O74302 440 aa5.69□□□□□ -1.5
YPT1YFL038C COX5BP00425 151 aa5.69□□□□□ -1.5
YPT1YFL038C CDC28P00546 298 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C TY1A-AP0CX57 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-PR1P0CX58 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-ORP0CX59 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-PR2P0CX60 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-DR5P0CX65 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-ER2P0CX66 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-GR3P0CX67 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-LR1P0CX68 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-MR2P0CX69 440 aa5.69□□□□□ -1.5
YPT1YFL038C RPL30P14120 105 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C MRPL33P20084 86 aa5.69□□□□□ -1.5
YPT1YFL038C OLE1P21147 510 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C YBR096WP38256 230 aa5.69□□□□□ -1.5
YPT1YFL038C AIM3P38266 947 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C YEA6P39953 335 aa5.69□□□□□ -1.5
YPT1YFL038C SPC25P40014 221 aa5.69□□□□□ -1.5
YPT1YFL038C XBP1P40489 647 aa5.69□□□□□ -1.5
YPT1YFL038C REE1P40893 198 aa5.69□□□□□ -1.5
YPT1YFL038C QRI1P43123 477 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C TY1A-JR2P47099 440 aa5.69□□□□□ -1.5
YPT1YFL038C ADO1P47143 340 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C PCP1P53259 346 aa5.69□□□□□ -1.5
YPT1YFL038C YNL165WP53891 406 aa5.69□□□□□ -1.5
YPT1YFL038C RSM23Q01163 450 aa5.69□□□□□ -1.5
YPT1YFL038C GIS1Q03833 894 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-DR1Q03856 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-ML1Q04706 440 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C ERP1Q05359 219 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C YPD1Q07688 167 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-BRQ12217 440 aa5.69□□□□□ -1.5
YPT1YFL038C PRS5Q12265 496 aaKnown RBP5.69□□□□□ -1.5
YPT1YFL038C MED4Q12343 284 aa5.69□□□□□ -1.5
YPT1YFL038C SNU23Q12368 194 aaPredicted RBP5.69□□□□□ -1.5
YPT1YFL038C TY1A-NL2Q12470 440 aa5.69□□□□□ -1.5
YPT1YFL038C TY1A-GR2Q12485 440 aa5.69□□□□□ -1.5
YPT1YFL038C YPR117WQ06116 2489 aa5.69□□□□□ -1.5
YPT1YFL038C TDH3P00359 332 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
YPT1YFL038C YML003WP0CF16 290 aa5.68□□□□□ -1.5
YPT1YFL038C PDX1P16451 410 aa5.68□□□□□ -1.5
YPT1YFL038C PCL1P24867 279 aa5.68□□□□□ -1.5
YPT1YFL038C PRS3P38689 320 aaKnown RBP5.68□□□□□ -1.5
YPT1YFL038C PGD1P40356 397 aa5.68□□□□□ -1.5
YPT1YFL038C PKP2P53170 491 aa5.68□□□□□ -1.5
YPT1YFL038C NRM1P53718 249 aa5.68□□□□□ -1.5
YPT1YFL038C YNR048WP53740 393 aa5.68□□□□□ -1.5
YPT1YFL038C ATG21Q02887 496 aa5.68□□□□□ -1.5
YPT1YFL038C YDR387CQ04162 555 aa5.68□□□□□ -1.5
YPT1YFL038C ZEO1Q08245 113 aa5.68□□□□□ -1.5
YPT1YFL038C YOR376WQ08900 122 aa5.68□□□□□ -1.5
YPT1YFL038C ARO3P14843 370 aaKnown RBP5.67□□□□□ -1.5
YPT1YFL038C ERG8P24521 451 aa5.67□□□□□ -1.5
YPT1YFL038C PEX4P29340 183 aa5.67□□□□□ -1.5
YPT1YFL038C SOF1P33750 489 aaKnown RBP5.67□□□□□ -1.5
YPT1YFL038C POP2P39008 433 aa5.67□□□□□ -1.5
YPT1YFL038C YEA4P40004 342 aa5.67□□□□□ -1.5
YPT1YFL038C YND1P40009 630 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms