RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C YER079WP40052 210 aaKnown RBP9.2□□□□□ -0.94
VPS60YDR486C MID1P41821 548 aa9.2□□□□□ -0.94
VPS60YDR486C GNA1P43577 159 aaPredicted RBP9.2□□□□□ -0.94
VPS60YDR486C SKP1P52286 194 aa9.2□□□□□ -0.94
VPS60YDR486C CRZ1P53968 678 aa9.2□□□□□ -0.94
VPS60YDR486C YDC1Q02896 317 aa9.2□□□□□ -0.94
VPS60YDR486C GAT3Q07928 141 aa9.2□□□□□ -0.94
VPS60YDR486C YOR385WQ08909 290 aa9.2□□□□□ -0.94
VPS60YDR486C RDI1Q12434 202 aa9.2□□□□□ -0.94
VPS60YDR486C FSH3Q99369 266 aa9.2□□□□□ -0.94
VPS60YDR486C REP2P03872 296 aa9.19□□□□□ -0.94
VPS60YDR486C AAC1P04710 309 aa9.19□□□□□ -0.94
VPS60YDR486C RPS31P05759 152 aaKnown RBP9.19□□□□□ -0.94
VPS60YDR486C SPS100P13130 326 aa9.19□□□□□ -0.94
VPS60YDR486C GCN3P14741 305 aa9.19□□□□□ -0.94
VPS60YDR486C PEX4P29340 183 aa9.19□□□□□ -0.94
VPS60YDR486C EGT2P42835 1041 aa9.19□□□□□ -0.94
VPS60YDR486C RSM27P53305 110 aa9.19□□□□□ -0.94
VPS60YDR486C GIM3P53900 129 aa9.19□□□□□ -0.94
VPS60YDR486C SKO1Q02100 647 aa9.19□□□□□ -0.94
VPS60YDR486C FMT1P32785 401 aa9.18□□□□□ -0.94
VPS60YDR486C PPQ1P32945 549 aa9.18□□□□□ -0.94
VPS60YDR486C GWT1P47026 490 aa9.18□□□□□ -0.94
VPS60YDR486C GPG1P53130 126 aa9.18□□□□□ -0.94
VPS60YDR486C ARG5,6Q01217 863 aa9.18□□□□□ -0.94
VPS60YDR486C LAP3Q01532 483 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
VPS60YDR486C YDR248CQ03786 193 aa9.18□□□□□ -0.94
VPS60YDR486C PIN3Q06449 215 aa9.18□□□□□ -0.94
VPS60YDR486C YOR186WQ08560 144 aa9.18□□□□□ -0.94
VPS60YDR486C EAF3Q12432 401 aa9.18□□□□□ -0.94
VPS60YDR486C RPL25P04456 142 aaKnown RBP9.17□□□□□ -0.94
VPS60YDR486C RPL6BP05739 176 aaKnown RBP9.17□□□□□ -0.94
VPS60YDR486C RPS23AP0CX29 145 aaKnown RBP9.17□□□□□ -0.94
VPS60YDR486C RPS23BP0CX30 145 aa9.17□□□□□ -0.94
VPS60YDR486C MTR2P34232 184 aaKnown RBP9.17□□□□□ -0.94
VPS60YDR486C SRL3P36167 246 aa9.17□□□□□ -0.94
VPS60YDR486C FLO10P36170 1169 aa9.17□□□□□ -0.94
VPS60YDR486C FIG1P38224 298 aa9.17□□□□□ -0.94
VPS60YDR486C PRS3P38689 320 aaKnown RBP9.17□□□□□ -0.94
VPS60YDR486C YMR279CQ03263 540 aa9.17□□□□□ -0.94
VPS60YDR486C SPS4P09937 338 aa9.16□□□□□ -0.94
VPS60YDR486C YLL053CP0CD98 152 aa9.16□□□□□ -0.94
VPS60YDR486C GRX2P17695 143 aaKnown RBP9.16□□□□□ -0.94
VPS60YDR486C IFM1P25038 676 aa9.16□□□□□ -0.94
VPS60YDR486C NAT2P37293 288 aa9.16□□□□□ -0.94
VPS60YDR486C SED1Q01589 338 aa9.16□□□□□ -0.94
VPS60YDR486C YML018CQ03730 393 aa9.16□□□□□ -0.94
VPS60YDR486C VBA1Q04301 562 aa9.16□□□□□ -0.94
VPS60YDR486C MPD1Q12404 318 aaKnown RBP9.16□□□□□ -0.94
VPS60YDR486C PET20Q99373 253 aa9.16□□□□□ -0.94
VPS60YDR486C PET122P10355 254 aa9.15□□□□□ -0.94
VPS60YDR486C LSM1P47017 172 aaKnown RBP9.15□□□□□ -0.94
VPS60YDR486C GTF1P53260 183 aaPredicted RBP9.15□□□□□ -0.94
VPS60YDR486C NGL2Q03264 515 aaKnown RBP9.15□□□□□ -0.94
VPS60YDR486C YTH1Q06102 208 aaPredicted RBP9.15□□□□□ -0.94
VPS60YDR486C SYM1Q06563 197 aa9.15□□□□□ -0.94
VPS60YDR486C NUM1Q00402 2748 aa9.15□□□□□ -0.95
VPS60YDR486C SAR1P20606 190 aaKnown RBP9.14□□□□□ -0.95
VPS60YDR486C CPR4P25334 318 aa9.14□□□□□ -0.95
VPS60YDR486C IMP1P28627 190 aa9.14□□□□□ -0.95
VPS60YDR486C ERG3P32353 365 aa9.14□□□□□ -0.95
VPS60YDR486C YOX1P34161 385 aa9.14□□□□□ -0.95
VPS60YDR486C PAN3P36102 679 aaPredicted RBP9.14□□□□□ -0.95
VPS60YDR486C YJR011CP47086 261 aaPredicted RBP9.14□□□□□ -0.95
VPS60YDR486C TAF4P50105 388 aa9.14□□□□□ -0.95
VPS60YDR486C OKP1P53298 406 aa9.14□□□□□ -0.95
VPS60YDR486C YLR125WQ12138 136 aa9.14□□□□□ -0.95
VPS60YDR486C URA3P03962 267 aa9.13□□□□□ -0.95
VPS60YDR486C YCR101CP25607 182 aa9.13□□□□□ -0.95
VPS60YDR486C DAL80P26343 269 aa9.13□□□□□ -0.95
VPS60YDR486C OCH1P31755 480 aa9.13□□□□□ -0.95
VPS60YDR486C YKL107WP34251 309 aa9.13□□□□□ -0.95
VPS60YDR486C EDS1P38073 919 aa9.13□□□□□ -0.95
VPS60YDR486C MRX5P47007 382 aa9.13□□□□□ -0.95
VPS60YDR486C YMR254CQ04838 102 aa9.13□□□□□ -0.95
VPS60YDR486C GRC3Q07845 632 aa9.13□□□□□ -0.95
VPS60YDR486C TRM13Q12383 476 aa9.13□□□□□ -0.95
VPS60YDR486C DIT1P21623 536 aa9.12□□□□□ -0.95
VPS60YDR486C YCR016WP25617 290 aaKnown RBP9.12□□□□□ -0.95
VPS60YDR486C SHM2P37291 469 aaKnown RBP9.12□□□□□ -0.95
VPS60YDR486C PRS2P38620 318 aaKnown RBP9.12□□□□□ -0.95
VPS60YDR486C LNP1P38878 278 aa9.12□□□□□ -0.95
VPS60YDR486C CCS1P40202 249 aaKnown RBP9.12□□□□□ -0.95
VPS60YDR486C ALG9P53868 555 aaKnown RBP9.12□□□□□ -0.95
VPS60YDR486C NRG1Q03125 231 aa9.12□□□□□ -0.95
VPS60YDR486C FCY22Q12119 530 aa9.12□□□□□ -0.95
VPS60YDR486C YLR108CQ12259 485 aa9.12□□□□□ -0.95
VPS60YDR486C MRP17P28778 131 aa9.11□□□□□ -0.95
VPS60YDR486C YKL187CP34231 750 aa9.11□□□□□ -0.95
VPS60YDR486C UTP30P36144 274 aaKnown RBP9.11□□□□□ -0.95
VPS60YDR486C SWD3P38123 315 aa9.11□□□□□ -0.95
VPS60YDR486C POP8P38208 133 aa9.11□□□□□ -0.95
VPS60YDR486C YBR197CP38306 217 aa9.11□□□□□ -0.95
VPS60YDR486C ECM14P38836 430 aa9.11□□□□□ -0.95
VPS60YDR486C RPS0BP46654 252 aaKnown RBP9.11□□□□□ -0.95
VPS60YDR486C PRM15Q03262 622 aa9.11□□□□□ -0.95
VPS60YDR486C YDR114CQ04597 100 aa9.11□□□□□ -0.95
VPS60YDR486C UBA3Q99344 299 aa9.11□□□□□ -0.95
VPS60YDR486C RPL39P04650 51 aa9.1□□□□□ -0.95
VPS60YDR486C ARG80P07249 177 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms