RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SUR7P54003 302 aa1.12□□□□□ -2.23
MSN5YDR335W GOT1Q03554 138 aa1.12□□□□□ -2.23
MSN5YDR335W ECI1Q05871 280 aa1.12□□□□□ -2.23
MSN5YDR335W HRI1Q05905 244 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W YET3Q07451 203 aa1.12□□□□□ -2.23
MSN5YDR335W ADE6P38972 1358 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W MRS3P10566 314 aa1.12□□□□□ -2.23
MSN5YDR335W PHO80P20052 293 aa1.12□□□□□ -2.23
MSN5YDR335W IDP1P21954 428 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W TRM7P38238 310 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W TIM17P39515 158 aa1.12□□□□□ -2.23
MSN5YDR335W BDH1P39714 382 aa1.12□□□□□ -2.23
MSN5YDR335W AVT7P40501 490 aa1.12□□□□□ -2.23
MSN5YDR335W MRPL49P40858 161 aaPredicted RBP1.12□□□□□ -2.23
MSN5YDR335W CDC1P40986 491 aa1.12□□□□□ -2.23
MSN5YDR335W TDA10P42938 290 aa1.12□□□□□ -2.23
MSN5YDR335W RRT5P43607 289 aa1.12□□□□□ -2.23
MSN5YDR335W MIC26P50087 233 aa1.12□□□□□ -2.23
MSN5YDR335W EAF7P53911 425 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W NRK1P53915 240 aa1.12□□□□□ -2.23
MSN5YDR335W ODC1Q03028 310 aa1.12□□□□□ -2.23
MSN5YDR335W YDR115WQ04598 105 aa1.12□□□□□ -2.23
MSN5YDR335W LIP2Q06005 328 aa1.12□□□□□ -2.23
MSN5YDR335W SEI1Q06058 285 aa1.12□□□□□ -2.23
MSN5YDR335W YOL024WQ08172 172 aa1.12□□□□□ -2.23
MSN5YDR335W SLD7Q08457 257 aa1.12□□□□□ -2.23
MSN5YDR335W FLO11P08640 1367 aa1.12□□□□□ -2.23
MSN5YDR335W HHF1P02309 103 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W SEC14P24280 304 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W SEC1P30619 724 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W UTP11P34247 250 aaPredicted RBP1.12□□□□□ -2.23
MSN5YDR335W UPS2P35200 230 aa1.12□□□□□ -2.23
MSN5YDR335W ECM33P38248 429 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W PHO89P38361 574 aa1.12□□□□□ -2.23
MSN5YDR335W GLE2P40066 365 aa1.12□□□□□ -2.23
MSN5YDR335W XBP1P40489 647 aa1.12□□□□□ -2.23
MSN5YDR335W STB1P42845 420 aa1.12□□□□□ -2.23
MSN5YDR335W QRI1P43123 477 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W FMP32P43557 207 aa1.12□□□□□ -2.23
MSN5YDR335W YFR057WP43625 151 aa1.12□□□□□ -2.23
MSN5YDR335W IKS1P47042 667 aa1.12□□□□□ -2.23
MSN5YDR335W YGL193CP53097 103 aa1.12□□□□□ -2.23
MSN5YDR335W YGL034CP53186 121 aa1.12□□□□□ -2.23
MSN5YDR335W SGT1Q08446 395 aa1.12□□□□□ -2.23
MSN5YDR335W FRE8Q12209 686 aa1.12□□□□□ -2.23
MSN5YDR335W MCT1Q12283 360 aa1.12□□□□□ -2.23
MSN5YDR335W RPN6Q12377 434 aa1.12□□□□□ -2.23
MSN5YDR335W RPL21BQ12672 160 aaKnown RBP1.12□□□□□ -2.23
MSN5YDR335W YBL008W-AQ3E821 79 aa1.12□□□□□ -2.23
MSN5YDR335W RIB3Q99258 208 aa1.12□□□□□ -2.23
MSN5YDR335W CMD1P06787 147 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W MAK32P23060 363 aa1.11□□□□□ -2.23
MSN5YDR335W AAT2P23542 418 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YHL044WP38727 235 aa1.11□□□□□ -2.23
MSN5YDR335W MOB2P43563 287 aa1.11□□□□□ -2.23
MSN5YDR335W UBC13P52490 153 aa1.11□□□□□ -2.23
MSN5YDR335W HST4P53688 370 aa1.11□□□□□ -2.23
MSN5YDR335W CRZ1P53968 678 aa1.11□□□□□ -2.23
MSN5YDR335W UTP15Q04305 513 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YMR114CQ04471 368 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YLR030WQ07967 263 aa1.11□□□□□ -2.23
MSN5YDR335W YOR283WQ12040 230 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YPR011CQ12251 326 aa1.11□□□□□ -2.23
MSN5YDR335W TPO4Q12256 659 aa1.11□□□□□ -2.23
MSN5YDR335W MRX4Q12467 430 aa1.11□□□□□ -2.23
MSN5YDR335W SLO1Q3E784 85 aa1.11□□□□□ -2.23
MSN5YDR335W DYN1P36022 4092 aa1.11□□□□□ -2.23
MSN5YDR335W NSP1P14907 823 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W DEP1P31385 405 aa1.11□□□□□ -2.23
MSN5YDR335W MDH3P32419 343 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
MSN5YDR335W CPR5P35176 225 aa1.11□□□□□ -2.23
MSN5YDR335W LEU5P38702 357 aa1.11□□□□□ -2.23
MSN5YDR335W PCI8P40512 444 aa1.11□□□□□ -2.23
MSN5YDR335W YFL064CP43540 174 aa1.11□□□□□ -2.23
MSN5YDR335W COQ5P49017 307 aa1.11□□□□□ -2.23
MSN5YDR335W FMP48P53233 369 aa1.11□□□□□ -2.23
MSN5YDR335W MPA43P53583 542 aaPredicted RBP1.11□□□□□ -2.23
MSN5YDR335W YPR091CQ06833 770 aa1.11□□□□□ -2.23
MSN5YDR335W MRX9Q07349 420 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W IRC10Q08118 586 aa1.11□□□□□ -2.23
MSN5YDR335W YPR202WQ08993 238 aa1.11□□□□□ -2.23
MSN5YDR335W THP3Q12049 470 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W USB1Q12208 290 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W RDL1Q12305 139 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W CYC3P06182 269 aa1.11□□□□□ -2.23
MSN5YDR335W YPR170W-BP0C5R9 85 aa1.11□□□□□ -2.23
MSN5YDR335W BGL2P15703 313 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W MIR1P23641 311 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YCR023CP25351 611 aa1.11□□□□□ -2.23
MSN5YDR335W NTF2P33331 125 aaKnown RBP1.11□□□□□ -2.23
MSN5YDR335W YBR096WP38256 230 aa1.11□□□□□ -2.23
MSN5YDR335W MDM31P38880 579 aa1.11□□□□□ -2.23
MSN5YDR335W MDM34P53083 459 aa1.11□□□□□ -2.23
MSN5YDR335W YNL140CP53910 189 aa1.11□□□□□ -2.23
MSN5YDR335W VPS60Q03390 229 aa1.11□□□□□ -2.23
MSN5YDR335W SCS7Q03529 384 aa1.11□□□□□ -2.23
MSN5YDR335W GAS3Q03655 524 aa1.11□□□□□ -2.23
MSN5YDR335W SPG4Q04438 115 aa1.11□□□□□ -2.23
MSN5YDR335W YLR177WQ06251 628 aa1.11□□□□□ -2.23
MSN5YDR335W YLR361C-AQ3E795 98 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 682.4 ms