RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C APC9Q12107 265 aa3.35□□□□□ -1.87
CIT1YNR001C RGT2Q12300 763 aa3.35□□□□□ -1.87
CIT1YNR001C SFM1Q12314 213 aa3.35□□□□□ -1.87
CIT1YNR001C BI3Q9ZZW7 517 aa3.35□□□□□ -1.87
CIT1YNR001C NSP1P14907 823 aaKnown RBP3.34□□□□□ -1.88
CIT1YNR001C BUB2P26448 306 aaPredicted RBP3.34□□□□□ -1.88
CIT1YNR001C IES6P32617 166 aa3.34□□□□□ -1.88
CIT1YNR001C PDC2P32896 925 aa3.34□□□□□ -1.88
CIT1YNR001C TIR2P33890 251 aa3.34□□□□□ -1.88
CIT1YNR001C JEN1P36035 616 aa3.34□□□□□ -1.88
CIT1YNR001C MRP21P38175 177 aa3.34□□□□□ -1.88
CIT1YNR001C LEU5P38702 357 aa3.34□□□□□ -1.88
CIT1YNR001C SOP4P39543 234 aaPredicted RBP3.34□□□□□ -1.88
CIT1YNR001C YIL169CP40442 995 aa3.34□□□□□ -1.88
CIT1YNR001C DFG10P40526 253 aa3.34□□□□□ -1.88
CIT1YNR001C ATG18P43601 500 aa3.34□□□□□ -1.88
CIT1YNR001C SFH5P47008 294 aa3.34□□□□□ -1.88
CIT1YNR001C GWT1P47026 490 aa3.34□□□□□ -1.88
CIT1YNR001C IRC18P47056 224 aa3.34□□□□□ -1.88
CIT1YNR001C TPN1P53099 579 aa3.34□□□□□ -1.88
CIT1YNR001C POP6P53218 158 aa3.34□□□□□ -1.88
CIT1YNR001C RTT103Q05543 409 aa3.34□□□□□ -1.88
CIT1YNR001C GRX8Q05926 109 aa3.34□□□□□ -1.88
CIT1YNR001C GAS2Q06135 555 aa3.34□□□□□ -1.88
CIT1YNR001C YOR289WQ12012 251 aaPredicted RBP3.34□□□□□ -1.88
CIT1YNR001C YLR108CQ12259 485 aa3.34□□□□□ -1.88
CIT1YNR001C RRP42Q12277 265 aaPredicted RBP3.34□□□□□ -1.88
CIT1YNR001C GTT2Q12390 233 aa3.34□□□□□ -1.88
CIT1YNR001C DET1Q99288 334 aaKnown RBP3.34□□□□□ -1.88
CIT1YNR001C FKS1P38631 1876 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C RIF1P29539 1916 aa3.33□□□□□ -1.88
CIT1YNR001C RAD10P06838 210 aa3.33□□□□□ -1.88
CIT1YNR001C RPS1BP23248 255 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C EXG1P23776 448 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C RPS1AP33442 255 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C CBT1P36038 271 aaPredicted RBP3.33□□□□□ -1.88
CIT1YNR001C TVP38P36164 337 aa3.33□□□□□ -1.88
CIT1YNR001C MRPL17P36528 281 aa3.33□□□□□ -1.88
CIT1YNR001C RIB1P38066 345 aa3.33□□□□□ -1.88
CIT1YNR001C CHK1P38147 527 aa3.33□□□□□ -1.88
CIT1YNR001C SHG1P38337 142 aa3.33□□□□□ -1.88
CIT1YNR001C MIC12P38341 106 aa3.33□□□□□ -1.88
CIT1YNR001C NSG1P38837 291 aa3.33□□□□□ -1.88
CIT1YNR001C VPS52P39904 641 aa3.33□□□□□ -1.88
CIT1YNR001C RGI1P40043 161 aaPredicted RBP3.33□□□□□ -1.88
CIT1YNR001C AYR1P40471 297 aa3.33□□□□□ -1.88
CIT1YNR001C SIM1P40472 476 aa3.33□□□□□ -1.88
CIT1YNR001C RPL10P41805 221 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C YFL040WP43562 540 aa3.33□□□□□ -1.88
CIT1YNR001C PMT4P46971 762 aa3.33□□□□□ -1.88
CIT1YNR001C IBD2P53892 351 aa3.33□□□□□ -1.88
CIT1YNR001C LSM7P53905 115 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C IDP3P53982 420 aaKnown RBP3.33□□□□□ -1.88
CIT1YNR001C ASI3P53983 676 aa3.33□□□□□ -1.88
CIT1YNR001C MRPS16Q02608 121 aa3.33□□□□□ -1.88
CIT1YNR001C RMI1Q02685 241 aa3.33□□□□□ -1.88
CIT1YNR001C YMD8Q03697 442 aa3.33□□□□□ -1.88
CIT1YNR001C YPR091CQ06833 770 aa3.33□□□□□ -1.88
CIT1YNR001C MFG1Q07684 458 aa3.33□□□□□ -1.88
CIT1YNR001C RAS2P01120 322 aaKnown RBP3.32□□□□□ -1.88
CIT1YNR001C CBS2P14905 389 aa3.32□□□□□ -1.88
CIT1YNR001C AHC2P25649 128 aa3.32□□□□□ -1.88
CIT1YNR001C LDS1P31379 325 aa3.32□□□□□ -1.88
CIT1YNR001C GLC7P32598 312 aaKnown RBP3.32□□□□□ -1.88
CIT1YNR001C CAF4P36130 643 aa3.32□□□□□ -1.88
CIT1YNR001C YCR087C-AP37263 153 aa3.32□□□□□ -1.88
CIT1YNR001C DTR1P38125 572 aa3.32□□□□□ -1.88
CIT1YNR001C NVJ1P38881 321 aa3.32□□□□□ -1.88
CIT1YNR001C MST28P39552 234 aa3.32□□□□□ -1.88
CIT1YNR001C COX15P40086 486 aa3.32□□□□□ -1.88
CIT1YNR001C PGD1P40356 397 aa3.32□□□□□ -1.88
CIT1YNR001C YKE4P40544 346 aa3.32□□□□□ -1.88
CIT1YNR001C GTT1P40582 234 aa3.32□□□□□ -1.88
CIT1YNR001C SNO3P43544 222 aa3.32□□□□□ -1.88
CIT1YNR001C AIF1P52923 378 aa3.32□□□□□ -1.88
CIT1YNR001C JAC1P53193 184 aa3.32□□□□□ -1.88
CIT1YNR001C SWC4P53201 476 aa3.32□□□□□ -1.88
CIT1YNR001C CDC14Q00684 551 aa3.32□□□□□ -1.88
CIT1YNR001C MZM1Q03429 123 aaPredicted RBP3.32□□□□□ -1.88
CIT1YNR001C MAK3Q03503 176 aa3.32□□□□□ -1.88
CIT1YNR001C YDR249CQ03787 373 aa3.32□□□□□ -1.88
CIT1YNR001C DCR2Q05924 578 aa3.32□□□□□ -1.88
CIT1YNR001C GAT3Q07928 141 aa3.32□□□□□ -1.88
CIT1YNR001C IES4Q08561 116 aa3.32□□□□□ -1.88
CIT1YNR001C YLR046CQ12253 270 aa3.32□□□□□ -1.88
CIT1YNR001C PST2Q12335 198 aaKnown RBP3.32□□□□□ -1.88
CIT1YNR001C UTP23Q12339 254 aaKnown RBP3.32□□□□□ -1.88
CIT1YNR001C YDL199CQ12407 687 aa3.32□□□□□ -1.88
CIT1YNR001C SNF8Q12483 233 aa3.32□□□□□ -1.88
CIT1YNR001C YBR298C-AQ8TGK4 73 aa3.32□□□□□ -1.88
CIT1YNR001C SPS2P08459 502 aa3.31□□□□□ -1.88
CIT1YNR001C YBR121C-AP0C5L4 52 aa3.31□□□□□ -1.88
CIT1YNR001C TFS1P14306 219 aa3.31□□□□□ -1.88
CIT1YNR001C AMD1P15274 810 aaKnown RBP3.31□□□□□ -1.88
CIT1YNR001C RNA15P25299 296 aaPredicted RBP3.31□□□□□ -1.88
CIT1YNR001C YCR099CP25657 155 aa3.31□□□□□ -1.88
CIT1YNR001C RPL16BP26785 198 aaKnown RBP3.31□□□□□ -1.88
CIT1YNR001C IDH1P28834 360 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
CIT1YNR001C NDC1P32500 655 aa3.31□□□□□ -1.88
CIT1YNR001C SHE2P36068 246 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms