RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W SNF8Q12483 233 aa2.02□□□□□ -2.09
SRP1YNL189W TY3A-IQ99219 290 aa2.02□□□□□ -2.09
SRP1YNL189W RNP1P32385 249 aa2.01□□□□□ -2.09
SRP1YNL189W GOS1P38736 223 aa2.01□□□□□ -2.09
SRP1YNL189W JHD2P47156 728 aaPredicted RBP2.01□□□□□ -2.09
SRP1YNL189W RGM1Q00453 211 aa2.01□□□□□ -2.09
SRP1YNL189W RRN5Q02983 363 aa2.01□□□□□ -2.09
SRP1YNL189W YPR147CQ06522 304 aaKnown RBP2.01□□□□□ -2.09
SRP1YNL189W SLD7Q08457 257 aa2.01□□□□□ -2.09
SRP1YNL189W MYO5Q04439 1219 aaKnown RBP2□□□□□ -2.09
SRP1YNL189W VPS68Q12016 184 aa2□□□□□ -2.09
SRP1YNL189W RPL26AP05743 127 aaKnown RBP1.99□□□□□ -2.09
SRP1YNL189W YKR104WP0CE69 306 aa1.99□□□□□ -2.09
SRP1YNL189W SEC22P22214 214 aa1.99□□□□□ -2.09
SRP1YNL189W RNA15P25299 296 aaPredicted RBP1.99□□□□□ -2.09
SRP1YNL189W DSK2P48510 373 aa1.99□□□□□ -2.09
SRP1YNL189W NUP84P52891 726 aa1.99□□□□□ -2.09
SRP1YNL189W USE1P53146 245 aa1.99□□□□□ -2.09
SRP1YNL189W RPL26BP53221 127 aaKnown RBP1.99□□□□□ -2.09
SRP1YNL189W YPR098CQ06089 161 aa1.99□□□□□ -2.09
SRP1YNL189W ATG17Q06410 417 aa1.99□□□□□ -2.09
SRP1YNL189W SUE1Q06524 206 aa1.99□□□□□ -2.09
SRP1YNL189W SGA1P08019 549 aa1.99□□□□□ -2.09
SRP1YNL189W MRH4P53166 561 aa1.99□□□□□ -2.09
SRP1YNL189W SLM2P53955 656 aa1.99□□□□□ -2.09
SRP1YNL189W CDD1Q06549 142 aa1.99□□□□□ -2.09
SRP1YNL189W YCT1Q12235 531 aa1.99□□□□□ -2.09
SRP1YNL189W EMP46Q12396 444 aa1.99□□□□□ -2.09
SRP1YNL189W MSA2P36157 363 aa1.98□□□□□ -2.09
SRP1YNL189W HOC1P47124 396 aa1.98□□□□□ -2.09
SRP1YNL189W SPG4Q04438 115 aa1.98□□□□□ -2.09
SRP1YNL189W PAM18Q07914 168 aa1.98□□□□□ -2.09
SRP1YNL189W RRS1Q08746 203 aaKnown RBP1.98□□□□□ -2.09
SRP1YNL189W CFT1Q06632 1357 aaKnown RBP1.97□□□□□ -2.09
SRP1YNL189W ARG80P07249 177 aa1.97□□□□□ -2.09
SRP1YNL189W SGE1P33335 543 aa1.97□□□□□ -2.09
SRP1YNL189W SPT8P38915 602 aa1.97□□□□□ -2.09
SRP1YNL189W BFR1P38934 470 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09 RIP-Chip
SRP1YNL189W THO1P40040 218 aaKnown RBP1.97□□□□□ -2.09
SRP1YNL189W COG3P40094 801 aa1.97□□□□□ -2.09
SRP1YNL189W YJR079WP47126 109 aa1.97□□□□□ -2.09
SRP1YNL189W YOR186WQ08560 144 aa1.97□□□□□ -2.09
SRP1YNL189W CSM4Q08955 156 aa1.97□□□□□ -2.09
SRP1YNL189W SNF6P18888 332 aa1.96□□□□□ -2.1
SRP1YNL189W RCN1P36054 211 aa1.96□□□□□ -2.1
SRP1YNL189W LDB7P38210 180 aa1.96□□□□□ -2.1
SRP1YNL189W YJL016WP47072 561 aa1.96□□□□□ -2.1
SRP1YNL189W RHO3Q00245 231 aaKnown RBP1.96□□□□□ -2.1
SRP1YNL189W GOT1Q03554 138 aa1.96□□□□□ -2.1
SRP1YNL189W RRP40Q08285 240 aaKnown RBP1.96□□□□□ -2.1
SRP1YNL189W BBP1Q12365 385 aa1.96□□□□□ -2.1
SRP1YNL189W YPL229WQ99395 206 aa1.96□□□□□ -2.1
SRP1YNL189W CHD1P32657 1468 aa1.96□□□□□ -2.1
SRP1YNL189W CLB6P32943 380 aa1.95□□□□□ -2.1
SRP1YNL189W SSH1P38353 490 aaKnown RBP1.95□□□□□ -2.1
SRP1YNL189W YGP1P38616 354 aaKnown RBP1.95□□□□□ -2.1
SRP1YNL189W SMD3P43321 101 aaKnown RBP1.95□□□□□ -2.1
SRP1YNL189W YNL046WP53956 172 aa1.95□□□□□ -2.1
SRP1YNL189W SRL4Q03085 281 aa1.95□□□□□ -2.1
SRP1YNL189W PEX12Q04370 399 aa1.95□□□□□ -2.1
SRP1YNL189W YDR124WQ04608 324 aa1.95□□□□□ -2.1
SRP1YNL189W SPO77Q06134 477 aa1.95□□□□□ -2.1
SRP1YNL189W MSA1Q08471 629 aa1.95□□□□□ -2.1
SRP1YNL189W SYC1Q08553 188 aaPredicted RBP1.95□□□□□ -2.1
SRP1YNL189W MATALPHA1P0CY06 175 aa1.95□□□□□ -2.1
SRP1YNL189W HMLALPHA1P0CY07 175 aa1.95□□□□□ -2.1
SRP1YNL189W RPS5P26783 225 aaKnown RBP1.95□□□□□ -2.1
SRP1YNL189W DRE2P36152 348 aa1.95□□□□□ -2.1
SRP1YNL189W TIF34P40217 347 aaKnown RBP1.95□□□□□ -2.1
SRP1YNL189W PET117Q02771 107 aa1.95□□□□□ -2.1
SRP1YNL189W MED4Q12343 284 aa1.95□□□□□ -2.1
SRP1YNL189W SAS5Q99314 248 aa1.95□□□□□ -2.1
SRP1YNL189W YHR032W-AP0C5N6 59 aa1.94□□□□□ -2.1
SRP1YNL189W MSN4P33749 630 aa1.94□□□□□ -2.1
SRP1YNL189W MRPL39P36533 70 aa1.94□□□□□ -2.1
SRP1YNL189W YHR127WP38833 243 aaKnown RBP1.94□□□□□ -2.1
SRP1YNL189W YHB1P39676 399 aaKnown RBP1.94□□□□□ -2.1
SRP1YNL189W YER189WP40104 122 aa1.94□□□□□ -2.1
SRP1YNL189W OST2P46964 130 aa1.94□□□□□ -2.1
SRP1YNL189W YGL159WP53110 370 aa1.94□□□□□ -2.1
SRP1YNL189W COS6P53344 381 aa1.94□□□□□ -2.1
SRP1YNL189W YLR030WQ07967 263 aa1.94□□□□□ -2.1
SRP1YNL189W YLR126CQ12288 251 aa1.94□□□□□ -2.1
SRP1YNL189W FKS1P38631 1876 aaKnown RBP1.93□□□□□ -2.1
SRP1YNL189W YCR102CP25608 368 aa1.93□□□□□ -2.1
SRP1YNL189W YKL075CP36083 450 aa1.93□□□□□ -2.1
SRP1YNL189W FZO1P38297 855 aa1.93□□□□□ -2.1
SRP1YNL189W DAN1P47178 298 aa1.93□□□□□ -2.1
SRP1YNL189W SNU23Q12368 194 aaPredicted RBP1.93□□□□□ -2.1
SRP1YNL189W YHR139C-AO13536 103 aa1.92□□□□□ -2.1
SRP1YNL189W RPO26P20435 155 aa1.92□□□□□ -2.1
SRP1YNL189W SCO1P23833 295 aa1.92□□□□□ -2.1
SRP1YNL189W YCR016WP25617 290 aaKnown RBP1.92□□□□□ -2.1
SRP1YNL189W FMC1P40491 155 aa1.92□□□□□ -2.1
SRP1YNL189W SEI1Q06058 285 aa1.92□□□□□ -2.1
SRP1YNL189W SAC3P46674 1301 aa1.92□□□□□ -2.1
SRP1YNL189W YLR462WO13556 202 aa1.91□□□□□ -2.1
SRP1YNL189W ERG24P32462 438 aaKnown RBP1.91□□□□□ -2.1
SRP1YNL189W CTR2P38865 189 aa1.91□□□□□ -2.1
SRP1YNL189W YEL075CP39972 122 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms