RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C VPS51P36116 164 aa9.89□□□□□ -0.83
SPT8YLR055C UBS1P38290 277 aa9.89□□□□□ -0.83
SPT8YLR055C RMD6P39975 231 aa9.89□□□□□ -0.83
SPT8YLR055C ASK10P48361 1146 aa9.89□□□□□ -0.83
SPT8YLR055C BXI1P48558 297 aa9.89□□□□□ -0.83
SPT8YLR055C SMX3P54999 86 aaPredicted RBP9.89□□□□□ -0.83
SPT8YLR055C MDM30Q05930 598 aa9.89□□□□□ -0.83
SPT8YLR055C NPC2Q12408 173 aa9.89□□□□□ -0.83
SPT8YLR055C FAS1P07149 2051 aaKnown RBP9.89□□□□□ -0.83
SPT8YLR055C CPR4P25334 318 aa9.89□□□□□ -0.83
SPT8YLR055C ADH7P25377 361 aa9.89□□□□□ -0.83
SPT8YLR055C YIL152WP40455 235 aa9.89□□□□□ -0.83
SPT8YLR055C UBP8P50102 471 aa9.89□□□□□ -0.83
SPT8YLR055C TPP1Q03796 238 aa9.89□□□□□ -0.83
SPT8YLR055C MRX8Q05473 314 aa9.89□□□□□ -0.83
SPT8YLR055C NNT1Q05874 261 aa9.89□□□□□ -0.83
SPT8YLR055C HEM25Q07534 307 aa9.89□□□□□ -0.83
SPT8YLR055C PET20Q99373 253 aa9.89□□□□□ -0.83
SPT8YLR055C GAS1P22146 559 aaKnown RBP9.88□□□□□ -0.83
SPT8YLR055C PET18P25362 215 aa9.88□□□□□ -0.83
SPT8YLR055C MTC7P32633 139 aa9.88□□□□□ -0.83
SPT8YLR055C POP8P38208 133 aa9.88□□□□□ -0.83
SPT8YLR055C NIT3P49954 291 aa9.88□□□□□ -0.83
SPT8YLR055C SMA2Q04658 369 aa9.88□□□□□ -0.83
SPT8YLR055C YPD1Q07688 167 aa9.88□□□□□ -0.83
SPT8YLR055C RDR1Q08904 546 aa9.88□□□□□ -0.83
SPT8YLR055C YPL272CQ08984 517 aa9.88□□□□□ -0.83
SPT8YLR055C AI1P03875 834 aa9.87□□□□□ -0.83
SPT8YLR055C RPS13P05756 151 aaKnown RBP9.87□□□□□ -0.83
SPT8YLR055C YML003WP0CF16 290 aa9.87□□□□□ -0.83
SPT8YLR055C SAC7P17121 654 aa9.87□□□□□ -0.83
SPT8YLR055C IFM1P25038 676 aa9.87□□□□□ -0.83
SPT8YLR055C NAS2P40555 220 aa9.87□□□□□ -0.83
SPT8YLR055C PMT3P47190 753 aa9.87□□□□□ -0.83
SPT8YLR055C SOL1P50278 321 aa9.87□□□□□ -0.83
SPT8YLR055C YCL001W-AP87012 153 aa9.87□□□□□ -0.83
SPT8YLR055C TRS23Q03784 219 aa9.87□□□□□ -0.83
SPT8YLR055C MRPL51Q06090 140 aaPredicted RBP9.87□□□□□ -0.83
SPT8YLR055C YLR146W-AQ2V2P1 62 aa9.87□□□□□ -0.83
SPT8YLR055C SCW4P53334 386 aaKnown RBP9.86□□□□□ -0.83
SPT8YLR055C PDR16P53860 351 aaKnown RBP9.86□□□□□ -0.83
SPT8YLR055C PRS5Q12265 496 aaKnown RBP9.86□□□□□ -0.83
SPT8YLR055C CMC2Q3E7A4 109 aa9.86□□□□□ -0.83
SPT8YLR055C RIP1P08067 215 aa9.86□□□□□ -0.83
SPT8YLR055C TRR1P29509 319 aaKnown RBP9.86□□□□□ -0.83
SPT8YLR055C VMA5P31412 392 aaKnown RBP9.86□□□□□ -0.83
SPT8YLR055C DCG1P32460 244 aa9.86□□□□□ -0.83
SPT8YLR055C YBL010CP32788 280 aa9.86□□□□□ -0.83
SPT8YLR055C MSN4P33749 630 aa9.86□□□□□ -0.83
SPT8YLR055C PAD1P33751 242 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
SPT8YLR055C GPX1P36014 167 aa9.86□□□□□ -0.83
SPT8YLR055C ERV15P38312 142 aa9.86□□□□□ -0.83
SPT8YLR055C GPI16P38875 610 aa9.86□□□□□ -0.83
SPT8YLR055C APJ1P53940 528 aa9.86□□□□□ -0.83
SPT8YLR055C SYM1Q06563 197 aa9.86□□□□□ -0.83
SPT8YLR055C MED4Q12343 284 aa9.86□□□□□ -0.83
SPT8YLR055C SGA1P08019 549 aa9.85□□□□□ -0.83
SPT8YLR055C NUP1P20676 1076 aa9.85□□□□□ -0.83
SPT8YLR055C SNC2P33328 115 aa9.85□□□□□ -0.83
SPT8YLR055C YJL016WP47072 561 aa9.85□□□□□ -0.83
SPT8YLR055C MTM1P53320 366 aa9.85□□□□□ -0.83
SPT8YLR055C YLR152CP54072 576 aa9.85□□□□□ -0.83
SPT8YLR055C ARL3Q02804 198 aa9.85□□□□□ -0.83
SPT8YLR055C YML018CQ03730 393 aa9.85□□□□□ -0.83
SPT8YLR055C HNT1Q04344 158 aaKnown RBP9.85□□□□□ -0.83
SPT8YLR055C HOP09932 586 aa9.84□□□□□ -0.83
SPT8YLR055C RPL20AP0CX23 172 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C RPL20BP0CX24 172 aaPredicted RBP9.84□□□□□ -0.83
SPT8YLR055C YER158CP40095 573 aa9.84□□□□□ -0.83
SPT8YLR055C VMA21P41806 77 aa9.84□□□□□ -0.83
SPT8YLR055C ADO1P47143 340 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C ACS2P52910 683 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C AAH1P53909 347 aa9.84□□□□□ -0.83
SPT8YLR055C SNP1Q00916 300 aaPredicted RBP9.84□□□□□ -0.83
SPT8YLR055C RVB1Q03940 463 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C FIT1Q04433 528 aa9.84□□□□□ -0.83
SPT8YLR055C YPR063CQ12160 140 aa9.84□□□□□ -0.83
SPT8YLR055C RPL17AP05740 184 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C FAA1P30624 700 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C TRS65P32893 560 aa9.84□□□□□ -0.83
SPT8YLR055C SHG1P38337 142 aa9.84□□□□□ -0.83
SPT8YLR055C SSH1P38353 490 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C RPL17BP46990 184 aaKnown RBP9.84□□□□□ -0.83
SPT8YLR055C YJR056CP47115 236 aa9.84□□□□□ -0.83
SPT8YLR055C GPI15P53961 229 aa9.84□□□□□ -0.83
SPT8YLR055C YPR174CQ06616 221 aaPredicted RBP9.84□□□□□ -0.83
SPT8YLR055C CDC26P14724 124 aa9.83□□□□□ -0.84
SPT8YLR055C RPB3P16370 318 aaKnown RBP9.83□□□□□ -0.84
SPT8YLR055C GLK1P17709 500 aaKnown RBP9.83□□□□□ -0.84
SPT8YLR055C MKK2P32491 506 aa9.83□□□□□ -0.84
SPT8YLR055C SLC1P33333 303 aa9.83□□□□□ -0.84
SPT8YLR055C YIL067CP40514 678 aa9.83□□□□□ -0.84
SPT8YLR055C IDP2P41939 412 aa9.83□□□□□ -0.84
SPT8YLR055C DAN1P47178 298 aa9.83□□□□□ -0.84
SPT8YLR055C MPP6P53725 186 aaPredicted RBP9.83□□□□□ -0.84
SPT8YLR055C YDR248CQ03786 193 aa9.83□□□□□ -0.84
SPT8YLR055C STE18P18852 110 aa9.82□□□□□ -0.84
SPT8YLR055C SEN34P39707 275 aa9.82□□□□□ -0.84
SPT8YLR055C BUD8P41698 603 aa9.82□□□□□ -0.84
SPT8YLR055C CAB5Q03941 241 aa9.82□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms