RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W CTR3Q06686 241 aa2.19□□□□□ -2.06
SPF1YEL031W MCH1Q07376 486 aa2.19□□□□□ -2.06
SPF1YEL031W TGS1Q12052 315 aa2.19□□□□□ -2.06
SPF1YEL031W YPR011CQ12251 326 aa2.19□□□□□ -2.06
SPF1YEL031W YPR014CQ6B0W2 109 aa2.19□□□□□ -2.06
SPF1YEL031W DFR1P07807 211 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SPF1YEL031W MET3P08536 511 aa2.18□□□□□ -2.06
SPF1YEL031W RPS25BP0C0T4 108 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W CAF20P12962 161 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W SAC7P17121 654 aa2.18□□□□□ -2.06
SPF1YEL031W AGP1P25376 633 aa2.18□□□□□ -2.06
SPF1YEL031W DAL80P26343 269 aa2.18□□□□□ -2.06
SPF1YEL031W SUA7P29055 345 aaPredicted RBP2.18□□□□□ -2.06
SPF1YEL031W YKL069WP36088 180 aa2.18□□□□□ -2.06
SPF1YEL031W VBA2P38358 474 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W DOG1P38774 246 aa2.18□□□□□ -2.06
SPF1YEL031W YEL057CP39983 233 aa2.18□□□□□ -2.06
SPF1YEL031W GPP1P41277 250 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W TAF4P50105 388 aa2.18□□□□□ -2.06
SPF1YEL031W RIB4P50861 169 aaPredicted RBP2.18□□□□□ -2.06
SPF1YEL031W AVT4P50944 713 aa2.18□□□□□ -2.06
SPF1YEL031W YAP1802P53309 568 aa2.18□□□□□ -2.06
SPF1YEL031W HHT1P61830 136 aa2.18□□□□□ -2.06
SPF1YEL031W YDR132CQ03900 495 aa2.18□□□□□ -2.06
SPF1YEL031W MRX8Q05473 314 aa2.18□□□□□ -2.06
SPF1YEL031W YDR344CQ05510 147 aa2.18□□□□□ -2.06
SPF1YEL031W CTS2Q06350 511 aa2.18□□□□□ -2.06
SPF1YEL031W TAZ1Q06510 381 aa2.18□□□□□ -2.06
SPF1YEL031W ATG10Q07879 167 aa2.18□□□□□ -2.06
SPF1YEL031W XYL2Q07993 356 aa2.18□□□□□ -2.06
SPF1YEL031W TMS1Q12116 473 aa2.18□□□□□ -2.06
SPF1YEL031W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SPF1YEL031W HUT1Q12520 339 aa2.18□□□□□ -2.06
SPF1YEL031W RPS25AQ3E792 108 aaPredicted RBP2.18□□□□□ -2.06
SPF1YEL031W YIL134C-AQ45U18 67 aa2.18□□□□□ -2.06
SPF1YEL031W SEC4P07560 215 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W YOL162WP0CF19 215 aa2.18□□□□□ -2.06
SPF1YEL031W CNE1P27825 502 aa2.18□□□□□ -2.06
SPF1YEL031W ECM15P35195 104 aa2.18□□□□□ -2.06
SPF1YEL031W CMC1P36064 111 aa2.18□□□□□ -2.06
SPF1YEL031W GMH1P36125 273 aa2.18□□□□□ -2.06
SPF1YEL031W HMT1P38074 348 aa2.18□□□□□ -2.06
SPF1YEL031W YBR013CP38215 129 aa2.18□□□□□ -2.06
SPF1YEL031W AXL2P38928 823 aa2.18□□□□□ -2.06
SPF1YEL031W IKS1P47042 667 aa2.18□□□□□ -2.06
SPF1YEL031W VPS25P47142 202 aa2.18□□□□□ -2.06
SPF1YEL031W YJR111CP47148 283 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W OST3P48439 350 aa2.18□□□□□ -2.06
SPF1YEL031W RHO3Q00245 231 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W YMR166CQ03829 368 aa2.18□□□□□ -2.06
SPF1YEL031W PKR1Q03880 122 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W PAL1Q05518 499 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W TMA10Q06177 86 aa2.18□□□□□ -2.06
SPF1YEL031W CDD1Q06549 142 aa2.18□□□□□ -2.06
SPF1YEL031W IRC10Q08118 586 aa2.18□□□□□ -2.06
SPF1YEL031W GAS5Q08193 484 aa2.18□□□□□ -2.06
SPF1YEL031W SRF1Q12516 437 aa2.18□□□□□ -2.06
SPF1YEL031W PHO5P00635 467 aa2.18□□□□□ -2.06
SPF1YEL031W GDH1P07262 454 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W MATALPHA1P0CY06 175 aa2.18□□□□□ -2.06
SPF1YEL031W HMLALPHA1P0CY07 175 aa2.18□□□□□ -2.06
SPF1YEL031W RFA3P26755 122 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W ARO2P28777 376 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W MDH3P32419 343 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SPF1YEL031W ERG1P32476 496 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W GSP1P32835 219 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W GSP2P32836 220 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W YKL187CP34231 750 aa2.18□□□□□ -2.06
SPF1YEL031W YIL012WP40551 113 aa2.18□□□□□ -2.06
SPF1YEL031W IRC24P40580 263 aa2.18□□□□□ -2.06
SPF1YEL031W SFH5P47008 294 aa2.18□□□□□ -2.06
SPF1YEL031W YDL183CP48569 320 aa2.18□□□□□ -2.06
SPF1YEL031W MIC26P50087 233 aa2.18□□□□□ -2.06
SPF1YEL031W TIM13P53299 105 aa2.18□□□□□ -2.06
SPF1YEL031W SCW4P53334 386 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W HOL1P53389 586 aa2.18□□□□□ -2.06
SPF1YEL031W MEP3P53390 489 aa2.18□□□□□ -2.06
SPF1YEL031W YNR064CP53750 290 aa2.18□□□□□ -2.06
SPF1YEL031W TGL2P54857 326 aa2.18□□□□□ -2.06
SPF1YEL031W GMC1Q04399 608 aa2.18□□□□□ -2.06
SPF1YEL031W YPR114WQ06107 315 aa2.18□□□□□ -2.06
SPF1YEL031W YLR179CQ06252 201 aaKnown RBP2.18□□□□□ -2.06
SPF1YEL031W ATG5Q12380 294 aa2.18□□□□□ -2.06
SPF1YEL031W MSW1P04803 379 aa2.17□□□□□ -2.06
SPF1YEL031W RPL9AP05738 191 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W MIR1P23641 311 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W DAL3P32459 195 aa2.17□□□□□ -2.06
SPF1YEL031W HXT4P32467 576 aa2.17□□□□□ -2.06
SPF1YEL031W SGE1P33335 543 aa2.17□□□□□ -2.06
SPF1YEL031W EHT1P38295 451 aa2.17□□□□□ -2.06
SPF1YEL031W URA8P38627 578 aaPredicted RBP2.17□□□□□ -2.06
SPF1YEL031W NSA2P40078 261 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W RRD1P40454 393 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W ASK10P48361 1146 aa2.17□□□□□ -2.06
SPF1YEL031W RPL9BP51401 191 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W SUT1P53032 299 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W YGR250CP53316 781 aaKnown RBP2.17□□□□□ -2.06
SPF1YEL031W YPL067CQ02754 198 aa2.17□□□□□ -2.06
SPF1YEL031W RCE1Q03530 315 aa2.17□□□□□ -2.06
SPF1YEL031W SNT309Q06091 175 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms