RNA–Protein interactions for RNA: YDR189W

SLY1, Transcript of Hydrophilic protein involved in ER/Golgi vesicle trafficking, yeast

Gene SLY1, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLY1	YDR189W	JEN1	P36035	616 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	DDI1	P40087	428 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	RPL10	P41805	221 aa	Known RBP	0.88	□□□□□ -2.27
SLY1	YDR189W	SLX9	P53251	210 aa	Predicted RBP	0.88	□□□□□ -2.27
SLY1	YDR189W	PEX12	Q04370	399 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	KAP95	Q06142	861 aa	Known RBP	0.88	□□□□□ -2.27
SLY1	YDR189W	SLD7	Q08457	257 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	MSA1	Q08471	629 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	BTS1	Q12051	335 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	YOL107W	Q12239	342 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	PST1	Q12355	444 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	EMP46	Q12396	444 aa		0.88	□□□□□ -2.27
SLY1	YDR189W	MSF1	P08425	469 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	TCP1	P12612	559 aa	Known RBP	0.87	□□□□□ -2.27
SLY1	YDR189W	DAL82	P21705	255 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	CWP1	P28319	239 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	DOA4	P32571	926 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	YOR062C	P36025	268 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	PET100	P38958	111 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	TEM1	P38987	245 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	RRT8	Q08219	342 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	YOR029W	Q12243	111 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	YBL008W-A	Q3E821	79 aa		0.87	□□□□□ -2.27
SLY1	YDR189W	RPS5	P26783	225 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	YUH1	P35127	236 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	PRS2	P38620	318 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	GOS1	P38736	223 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	SPT8	P38915	602 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	MRPL49	P40858	161 aa	Predicted RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	YDR209C	Q03480	137 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	ADH6	Q04894	360 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	CYR1	P08678	2026 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	VPS3	P23643	1011 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	HOM6	P31116	359 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	TIF34	P40217	347 aa	Known RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	JHD2	P47156	728 aa	Predicted RBP	0.86	□□□□□ -2.27
SLY1	YDR189W	SNZ2	P53824	298 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	SPO77	Q06134	477 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	YLR030W	Q07967	263 aa		0.86	□□□□□ -2.27
SLY1	YDR189W	COX5A	P00424	153 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	RAD3	P06839	778 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	RSR1	P13856	272 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	RCN1	P36054	211 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	SSH1	P38353	490 aa	Known RBP	0.85	□□□□□ -2.27
SLY1	YDR189W	SNX4	P47057	423 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	ASI3	P53983	676 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
SLY1	YDR189W	SDO1	Q07953	250 aa	Known RBP	0.85	□□□□□ -2.27
SLY1	YDR189W	BBP1	Q12365	385 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	SAS5	Q99314	248 aa		0.85	□□□□□ -2.27
SLY1	YDR189W	YGP1	P38616	354 aa	Known RBP	0.84	□□□□□ -2.27
SLY1	YDR189W	YGL159W	P53110	370 aa		0.84	□□□□□ -2.27
SLY1	YDR189W	YPR147C	Q06522	304 aa	Known RBP	0.84	□□□□□ -2.27
SLY1	YDR189W	YKR104W	P0CE69	306 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	SCM4	P32564	187 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	MRX3	P38172	270 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	BNA6	P43619	295 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	OST2	P46964	130 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	BAT2	P47176	376 aa	Known RBP	0.84	□□□□□ -2.28
SLY1	YDR189W	YNL134C	P53912	376 aa	Known RBP	0.84	□□□□□ -2.28
SLY1	YDR189W	YNL046W	P53956	172 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	ATG17	Q06410	417 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	YOR186W	Q08560	144 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	RRS1	Q08746	203 aa	Known RBP	0.84	□□□□□ -2.28
SLY1	YDR189W	YOR283W	Q12040	230 aa	Known RBP	0.84	□□□□□ -2.28
SLY1	YDR189W	EMC6	Q12431	108 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	DNA2	P38859	1522 aa		0.84	□□□□□ -2.28
SLY1	YDR189W	Q0255	P03881	472 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	SGE1	P33335	543 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	YHL026C	P38740	315 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	LSM4	P40070	187 aa	Known RBP	0.83	□□□□□ -2.28
SLY1	YDR189W	USE1	P53146	245 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	MRH4	P53166	561 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	YDR124W	Q04608	324 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	YPR098C	Q06089	161 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	TY3A-G	Q12173	290 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	MSH5	Q12175	901 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	SNF8	Q12483	233 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	TY3A-I	Q99219	290 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	KOG1	P38873	1557 aa		0.83	□□□□□ -2.28
SLY1	YDR189W	RNA15	P25299	296 aa	Predicted RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	DRE2	P36152	348 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	MRPL39	P36533	70 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	YHR125W	P38831	101 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	THO1	P40040	218 aa	Known RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	GOT1	Q03554	138 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	YLR173W	Q06247	608 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	PAM18	Q07914	168 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	ATG31	Q12421	196 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	FZO1	P38297	855 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	YHB1	P39676	399 aa	Known RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	RPA43	P46669	326 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	RHO3	Q00245	231 aa	Known RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	SPG4	Q04438	115 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	RRP40	Q08285	240 aa	Known RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	SYC1	Q08553	188 aa	Predicted RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	YCT1	Q12235	531 aa		0.82	□□□□□ -2.28
SLY1	YDR189W	SNU23	Q12368	194 aa	Predicted RBP	0.82	□□□□□ -2.28
SLY1	YDR189W	CCA1	P21269	546 aa		0.81	□□□□□ -2.28
SLY1	YDR189W	ERG24	P32462	438 aa	Known RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 111 ms