RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	AGE1	Q04412	482 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	BNA5	Q05979	453 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YLR446W	Q06204	433 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	KEI1	Q06346	221 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	SUE1	Q06524	206 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	FRE7	Q12333	620 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	YLR118C	Q12354	227 aa		4.75	□□□□□ -1.65
DBF4	YDR052C	COX3	P00420	269 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	SRD1	P09007	221 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PAU19	P0CE85	124 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PAU21	P0CE86	164 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PAU22	P0CE87	164 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	TIR1	P10863	254 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PAU3	P25610	124 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	YCR099C	P25657	155 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	CWP1	P28319	239 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	COX13	P32799	129 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	EMC3	P36039	253 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	YIR007W	P40566	764 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	SPG5	P42933	373 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PFD1	P46988	109 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	SAM37	P50110	327 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	ELC1	Q03071	99 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	NOC4	Q06512	552 aa	Predicted RBP	4.74	□□□□□ -1.65
DBF4	YDR052C	PAU23	Q07987	124 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	DCI1	Q08558	271 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	THI72	Q08579	599 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	YPL260W	Q08977	551 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	PRS5	Q12265	496 aa	Known RBP	4.74	□□□□□ -1.65
DBF4	YDR052C	PAU17	Q12370	124 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	SWM1	Q12379	170 aa		4.74	□□□□□ -1.65
DBF4	YDR052C	CDC9	P04819	755 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	YHL041W	P38730	149 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	PTH1	P38876	190 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	AVT7	P40501	490 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	BOR1	P53838	576 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	RCE1	Q03530	315 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	TY1A-DR2	Q03964	440 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	YLR346C	Q06139	101 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	MCH1	Q07376	486 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	YPR027C	Q12079	277 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	PAR32	Q12515	295 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	YGR161W-C	Q3E744	92 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	MBF1	O14467	151 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	TY2A-F	P0CX61	438 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	TY2A-GR2	P0CX62	438 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	SPT15	P13393	240 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	TFS1	P14306	219 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	RPB5	P20434	215 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	MSN1	P22148	382 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	URK1	P27515	501 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	FMT1	P32785	401 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	YSC83	P32792	385 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	SCD5	P34758	872 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	UPS2	P35200	230 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	MCH2	P36032	473 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	YMC2	P38087	329 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	SHE1	P38200	338 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	SAF1	P38352	637 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	SEC72	P39742	193 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	NSA2	P40078	261 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	MSB3	P48566	633 aa	Predicted RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	ERG25	P53045	309 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	YGR066C	P53242	292 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	TY1A-MR1	Q04215	440 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	CUR1	Q06469	252 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	POS5	Q06892	414 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	IRC13	Q08630	104 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
DBF4	YDR052C	TY1A-BL	Q12266	440 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	AIR2	Q12476	344 aa	Known RBP	4.73	□□□□□ -1.65
DBF4	YDR052C	HUT1	Q12520	339 aa		4.73	□□□□□ -1.65
DBF4	YDR052C	TDH2	P00358	332 aa	Known RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
DBF4	YDR052C	CPA1	P07258	411 aa	Known RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	SAG1	P20840	650 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	DAL82	P21705	255 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	MEK1	P24719	497 aa	Predicted RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	PMU1	P36069	295 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	MRPS9	P38120	278 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	AYR1	P40471	297 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	LYS5	P50113	272 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	TAM41	P53230	385 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	YNR014W	P53719	212 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	SMM1	P53720	384 aa	Known RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	NSG2	P53898	299 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	APJ1	P53940	528 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	SKO1	Q02100	647 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	GIS1	Q03833	894 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	CAB5	Q03941	241 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	SCW10	Q04951	389 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	ALG6	Q12001	544 aa	Known RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	TRM13	Q12383	476 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	FOL3	Q12676	427 aa	Predicted RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	COX19	Q3E731	98 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	PAI3	P01094	68 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	CBS1	P14066	229 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	OLE1	P21147	510 aa	Known RBP	4.72	□□□□□ -1.65
DBF4	YDR052C	EMP70	P32802	667 aa		4.72	□□□□□ -1.65
DBF4	YDR052C	AIM26	P32858	118 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms