RNA–Protein interactions for RNA: YDL051W

LHP1, RNA binding protein required for maturation of tRNA and U6 snRNA, yeast

Gene LHP1, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LHP1	YDL051W	NPY1	P53164	384 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	TIM21	P53220	239 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	PBP1	P53297	722 aa	Known RBP	4.28	□□□□□ -1.72
LHP1	YDL051W	MRPL22	P53881	309 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	TDA7	P53882	636 aa	Predicted RBP	4.28	□□□□□ -1.72
LHP1	YDL051W	APJ1	P53940	528 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	NCE101	Q02820	53 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	SRP1	Q02821	542 aa	Known RBP	4.28	□□□□□ -1.72
LHP1	YDL051W	RSM10	Q03201	203 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	HOF1	Q05080	669 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	IRC19	Q07843	230 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	REX3	Q12090	404 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	MCP1	Q12106	302 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	WHI5	Q12416	295 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	SET6	Q12529	373 aa		4.28	□□□□□ -1.72
LHP1	YDL051W	YMR084W	A2P2R3	262 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	TPI1	P00942	248 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	SCEI	P03882	235 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	GDH1	P07262	454 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	GLK1	P17709	500 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	SPO7	P18410	259 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	APA2	P22108	325 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	SEC22	P22214	214 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	PPH21	P23594	369 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	CLB6	P32943	380 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	CPR5	P35176	225 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	FRM2	P37261	193 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	ATG8	P38182	117 aa	RIP-Chip data	4.27	□□□□□ -1.73	not detected
LHP1	YDL051W	YBR197C	P38306	217 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	IMD2	P38697	523 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	ANS1	P38832	159 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	PZF1	P39933	429 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	GPP1	P41277	250 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	SHR5	P41912	237 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	NIT3	P49954	291 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	SKP1	P52286	194 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	SEH1	P53011	349 aa	Known RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	MPA43	P53583	542 aa	Predicted RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	YNR066C	P53752	436 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	AAH1	P53909	347 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	SAM50	P53969	484 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	TMA23	Q03525	211 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	EKI1	Q03764	534 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	YDR415C	Q04033	374 aa	Predicted RBP	4.27	□□□□□ -1.73
LHP1	YDL051W	MRPL1	Q04599	285 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	DFG5	Q05031	458 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	RRT7	Q07829	113 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	YOL073C	Q08232	322 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	AVO1	Q08236	1176 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	HRT1	Q08273	121 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	SRO7	Q12038	1033 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	WTM2	Q12206	467 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	RLM1	Q12224	676 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	MED4	Q12343	284 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	NAG1	Q8TGN9	163 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	UBA3	Q99344	299 aa		4.27	□□□□□ -1.73
LHP1	YDL051W	GAL1	P04385	528 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	HIS5	P07172	385 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	QCR2	P07257	368 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	SPS4	P09937	338 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	STE18	P18852	110 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	RNQ1	P25367	405 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	TRR1	P29509	319 aa	Known RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
LHP1	YDL051W	SSS1	P35179	80 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	FLO10	P36170	1169 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	ERV15	P38312	142 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	TRS20	P38334	175 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YPT31	P38555	223 aa	Known RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	FMO1	P38866	432 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YEA4	P40004	342 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	LSM4	P40070	187 aa	Known RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	YNL195C	P40168	261 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	LRO1	P40345	661 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	NSE4	P43124	402 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	AGX1	P43567	385 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YJR011C	P47086	261 aa	Predicted RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	UBP8	P50102	471 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	TYW3	P53177	273 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	TPC1	P53257	314 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	HOL1	P53389	586 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	MPP6	P53725	186 aa	Predicted RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	SNP1	Q00916	300 aa	Predicted RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	ERP1	Q05359	219 aa	Known RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	YPR174C	Q06616	221 aa	Predicted RBP	4.26	□□□□□ -1.73
LHP1	YDL051W	GRC3	Q07845	632 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	THI73	Q07904	523 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YOL029C	Q08187	201 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YCT1	Q12235	531 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	MCT1	Q12283	360 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	ERP4	Q12450	207 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	AGC1	Q12482	902 aa		4.26	□□□□□ -1.73
LHP1	YDL051W	YLR422W	Q06409	1932 aa		4.25	□□□□□ -1.73
LHP1	YDL051W	RPS14A	P06367	137 aa	Known RBP	4.25	□□□□□ -1.73
LHP1	YDL051W	YSF3	P0C074	85 aa	Predicted RBP	4.25	□□□□□ -1.73
LHP1	YDL051W	RPL20A	P0CX23	172 aa	Known RBP	4.25	□□□□□ -1.73
LHP1	YDL051W	RPL20B	P0CX24	172 aa	Predicted RBP	4.25	□□□□□ -1.73
LHP1	YDL051W	ARF1	P11076	181 aa	Known RBP	4.25	□□□□□ -1.73
LHP1	YDL051W	CKA1	P15790	372 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms