RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	DCR2	Q05924	578 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	SOR2	Q07786	357 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	YPQ1	Q12010	308 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	PER33	Q12144	273 aa		2.98	□□□□□ -1.93
CMD1	YBR109C	IPP1	P00817	287 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	REP2	P03872	296 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	CAR2	P07991	424 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	SPO7	P18410	259 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	RPB5	P20434	215 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PEX34	P25584	144 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	CPR3	P25719	182 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ADE1	P27616	306 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ACB1	P31787	87 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	RNP1	P32385	249 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	MKK1	P32490	508 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SRB6	P32570	121 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	GLC7	P32598	312 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	ECT1	P33412	323 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	DOA1	P36037	715 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SOL2	P37262	315 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PAU24	P38155	120 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SHE1	P38200	338 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	RRN10	P38204	145 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	TRM7	P38238	310 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	ICE2	P40499	491 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	YDL186W	P48568	277 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	COG7	P53195	279 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SAY1	P53324	424 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ERV29	P53337	310 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PAU12	P53343	120 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ASI3	P53983	676 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ODC1	Q03028	310 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	YMR310C	Q04867	317 aa	Predicted RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	ELP6	Q04868	273 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	BOP2	Q06150	570 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PEX30	Q06169	523 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	ARV1	Q06541	321 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	REX4	Q08237	289 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	AEP3	Q12089	606 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SNU23	Q12368	194 aa	Predicted RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	RDI1	Q12434	202 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PSF1	Q12488	208 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	PAR32	Q12515	295 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	YLR099W-A	Q3E798	87 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	YBR298C-A	Q8TGK4	73 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	YHR213W-A	Q8TGT4	77 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	SLH1	P53327	1967 aa	Known RBP	2.97	□□□□□ -1.93
CMD1	YBR109C	YLR422W	Q06409	1932 aa		2.97	□□□□□ -1.93
CMD1	YBR109C	COX9	P07255	59 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	RPC40	P07703	335 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	MSF1	P08425	469 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	MET2	P08465	486 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	SSA3	P09435	649 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	MRP1	P10662	321 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	NHP6B	P11633	99 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	ARO3	P14843	370 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	UTR1	P21373	530 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	PDC2	P32896	925 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	LHP1	P33399	275 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	KKQ8	P36004	724 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YOR062C	P36025	268 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	DTR1	P38125	572 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	SHG1	P38337	142 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YEL073C	P39974	107 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	OSW5	P40219	148 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	VHS2	P40463	436 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YJL213W	P40896	331 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	IDP2	P41939	412 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YGR210C	P42942	411 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	PRM10	P42946	383 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	RAD17	P48581	401 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	CGR1	P53188	120 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	JAC1	P53193	184 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	NRK1	P53915	240 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	SEC13	Q04491	297 aa	Known RBP	2.96	□□□□□ -1.94
CMD1	YBR109C	PLB3	Q08108	686 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	DCI1	Q08558	271 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YOR387C	Q08910	206 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	YOL107W	Q12239	342 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	FRE6	Q12473	712 aa		2.96	□□□□□ -1.94
CMD1	YBR109C	MSB2	P32334	1306 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	ILV5	P06168	395 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	HIS3	P06633	220 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	ARG80	P07249	177 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	GDH1	P07262	454 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	YOL162W	P0CF19	215 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	REV1	P12689	985 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	SPT15	P13393	240 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	IFM1	P25038	676 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	MRP17	P28778	131 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	LDS1	P31379	325 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	PAU2	P32612	120 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	MGM101	P32787	269 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	SFK1	P35735	353 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	VPS51	P36116	164 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	FMP46	P36141	133 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	RRP4	P38792	359 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	LSM12	P38828	187 aa	Known RBP	2.95	□□□□□ -1.94
CMD1	YBR109C	NSG1	P38837	291 aa		2.95	□□□□□ -1.94
CMD1	YBR109C	FET3	P38993	636 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms