RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C LYS20P48570 428 aaKnown RBP2.03□□□□□ -2.08
CLN3YAL040C SEH1P53011 349 aaKnown RBP2.03□□□□□ -2.08
CLN3YAL040C MKC7P53379 596 aa2.03□□□□□ -2.08
CLN3YAL040C YNR062CP53748 327 aa2.03□□□□□ -2.08
CLN3YAL040C PGA1P53896 198 aa2.03□□□□□ -2.08
CLN3YAL040C DML1Q03652 475 aa2.03□□□□□ -2.08
CLN3YAL040C TRS23Q03784 219 aa2.03□□□□□ -2.08
CLN3YAL040C NUP53Q03790 475 aa2.03□□□□□ -2.08
CLN3YAL040C COX20Q04935 205 aa2.03□□□□□ -2.08
CLN3YAL040C DIC1Q06143 298 aa2.03□□□□□ -2.08
CLN3YAL040C NEJ1Q06148 342 aa2.03□□□□□ -2.08
CLN3YAL040C YLR446WQ06204 433 aa2.03□□□□□ -2.08
CLN3YAL040C CTS2Q06350 511 aa2.03□□□□□ -2.08
CLN3YAL040C MRPL35Q06678 367 aa2.03□□□□□ -2.08
CLN3YAL040C YLR030WQ07967 263 aa2.03□□□□□ -2.08
CLN3YAL040C THP3Q12049 470 aaKnown RBP2.03□□□□□ -2.08
CLN3YAL040C MSH5Q12175 901 aa2.03□□□□□ -2.08
CLN3YAL040C ATG31Q12421 196 aa2.03□□□□□ -2.08
CLN3YAL040C CDC36P06100 191 aaPredicted RBP2.03□□□□□ -2.09
CLN3YAL040C RPB8P20436 146 aa2.03□□□□□ -2.09
CLN3YAL040C RPI1P23250 407 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C MSK1P32048 576 aa2.03□□□□□ -2.09
CLN3YAL040C ACH1P32316 526 aa2.03□□□□□ -2.09
CLN3YAL040C MDH3P32419 343 aaKnown RBP RIP-Chip data2.03□□□□□ -2.09not detected
CLN3YAL040C HSP150P32478 413 aa2.03□□□□□ -2.09
CLN3YAL040C RAD23P32628 398 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C TIM12P32830 109 aa2.03□□□□□ -2.09
CLN3YAL040C AIM29P36154 155 aa2.03□□□□□ -2.09
CLN3YAL040C MAL32P38158 584 aa2.03□□□□□ -2.09
CLN3YAL040C MTC4P38335 694 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C RPS20P38701 121 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C RRP4P38792 359 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C MDM31P38880 579 aa2.03□□□□□ -2.09
CLN3YAL040C CHL4P38907 458 aa2.03□□□□□ -2.09
CLN3YAL040C SYG1P40528 902 aa2.03□□□□□ -2.09
CLN3YAL040C YJL218WP40892 196 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C SAS2P40963 338 aa2.03□□□□□ -2.09
CLN3YAL040C RBL2P48606 106 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C SAY1P53324 424 aa2.03□□□□□ -2.09
CLN3YAL040C MAL12P53341 584 aa2.03□□□□□ -2.09
CLN3YAL040C NCE101Q02820 53 aa2.03□□□□□ -2.09
CLN3YAL040C MSS11Q03825 758 aa2.03□□□□□ -2.09
CLN3YAL040C RRP17Q04031 235 aaPredicted RBP2.03□□□□□ -2.09
CLN3YAL040C YMR252CQ04814 134 aa2.03□□□□□ -2.09
CLN3YAL040C PAL1Q05518 499 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C TAZ1Q06510 381 aa2.03□□□□□ -2.09
CLN3YAL040C YDL114WQ07530 308 aa2.03□□□□□ -2.09
CLN3YAL040C BRX1Q08235 291 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C HRT1Q08273 121 aa2.03□□□□□ -2.09
CLN3YAL040C UIP4Q08926 304 aa2.03□□□□□ -2.09
CLN3YAL040C BTS1Q12051 335 aa2.03□□□□□ -2.09
CLN3YAL040C TIR4Q12218 487 aaPredicted RBP2.03□□□□□ -2.09
CLN3YAL040C RNH203Q12338 110 aa2.03□□□□□ -2.09
CLN3YAL040C PRP46Q12417 451 aaPredicted RBP2.03□□□□□ -2.09
CLN3YAL040C APC2Q12440 853 aa2.03□□□□□ -2.09
CLN3YAL040C CMC2Q3E7A4 109 aa2.03□□□□□ -2.09
CLN3YAL040C DET1Q99288 334 aaKnown RBP2.03□□□□□ -2.09
CLN3YAL040C SEN1Q00416 2231 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C YEL009C-AA0A023PZF2 135 aa2.02□□□□□ -2.09
CLN3YAL040C TDH2P00358 332 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C TDH3P00359 332 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
CLN3YAL040C YPT1P01123 206 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C RAD52P06778 471 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C GDH1P07262 454 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C RPS16AP0CX51 143 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C RPS16BP0CX52 143 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C RPL12AP0CX53 165 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C RPL12BP0CX54 165 aa2.02□□□□□ -2.09
CLN3YAL040C DPM1P14020 267 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C CTA1P15202 515 aa2.02□□□□□ -2.09
CLN3YAL040C DAL82P21705 255 aa2.02□□□□□ -2.09
CLN3YAL040C GIT1P25346 518 aa2.02□□□□□ -2.09
CLN3YAL040C PBN1P25580 416 aa2.02□□□□□ -2.09
CLN3YAL040C HSP30P25619 332 aa2.02□□□□□ -2.09
CLN3YAL040C ECM15P35195 104 aa2.02□□□□□ -2.09
CLN3YAL040C YOR062CP36025 268 aa2.02□□□□□ -2.09
CLN3YAL040C MRPL15P36523 253 aa2.02□□□□□ -2.09
CLN3YAL040C YMR262WP38430 313 aa2.02□□□□□ -2.09
CLN3YAL040C NSG1P38837 291 aa2.02□□□□□ -2.09
CLN3YAL040C PTH1P38876 190 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C NVJ1P38881 321 aa2.02□□□□□ -2.09
CLN3YAL040C POP1P41812 875 aa2.02□□□□□ -2.09
CLN3YAL040C PFS2P42841 465 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C BRR6P53062 197 aa2.02□□□□□ -2.09
CLN3YAL040C YGL117WP53133 265 aa2.02□□□□□ -2.09
CLN3YAL040C LSG1P53145 640 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C MRH4P53166 561 aa2.02□□□□□ -2.09
CLN3YAL040C RRN9P53437 365 aa2.02□□□□□ -2.09
CLN3YAL040C ASI3P53983 676 aa2.02□□□□□ -2.09
CLN3YAL040C YKR005CQ02203 525 aa2.02□□□□□ -2.09
CLN3YAL040C MRP51Q02950 344 aa2.02□□□□□ -2.09
CLN3YAL040C BNA7Q04066 261 aa2.02□□□□□ -2.09
CLN3YAL040C SEC13Q04491 297 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C GAL83Q04739 417 aa2.02□□□□□ -2.09
CLN3YAL040C NMA1Q06178 401 aaKnown RBP2.02□□□□□ -2.09
CLN3YAL040C SSK1Q07084 712 aa2.02□□□□□ -2.09
CLN3YAL040C RAX1Q08760 435 aa2.02□□□□□ -2.09
CLN3YAL040C RRG7Q08774 242 aaPredicted RBP2.02□□□□□ -2.09
CLN3YAL040C BLM10P43583 2143 aa2.01□□□□□ -2.09
CLN3YAL040C SIR2P06700 562 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms