RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 GPC3P51654 580 aa13.42□□□□□ -0.26
CDC6-201ENST00000209728 CDH6P55285 790 aa13.42□□□□□ -0.26
CDC6-201ENST00000209728 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
CDC6-201ENST00000209728 TMEM143Q96AN5 459 aa13.42□□□□□ -0.26
CDC6-201ENST00000209728 OSBPL1AQ9BXW6 950 aa13.42□□□□□ -0.26
CDC6-201ENST00000209728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDC6-201ENST00000209728 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 WTIPA6NIX2 430 aaPredicted RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 AKAP3O75969 853 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 LMNAP02545 664 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 KLF6Q99612 283 aaPredicted RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 MKNK1Q9BUB5 465 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 OSBPL8Q9BZF1 889 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 FNDC3AQ9Y2H6 1198 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 NEU2Q9Y3R4 380 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 PIK3R2O00459 728 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 SDC4P31431 198 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 ITGA8P53708 1063 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 C2CD6Q53TS8 623 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 NUDCD3Q8IVD9 361 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 MAPK7Q13164 816 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 HSP90AA5PQ58FG0 334 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 FBXO25Q8TCJ0 367 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 KIFC3Q9BVG8 833 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
CDC6-201ENST00000209728 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 NPHS2Q9NP85 383 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 EIF3DO15371 548 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDC6-201ENST00000209728 SLC4A1P02730 911 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 STX1BP61266 288 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 LRRC34Q8IZ02 419 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 RAPGEF5Q92565 580 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
CDC6-201ENST00000209728 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 NFIAQ12857 509 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 LRRC43Q8N309 656 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 KCND1Q9NSA2 647 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 KLHL8Q9P2G9 620 aaPredicted RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 KRT3P12035 628 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 CHRNA5P30532 468 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 COILP38432 576 aaPredicted RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 ROR1Q01973 937 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 PDZD8Q8NEN9 1154 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 DTX3LQ8TDB6 740 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 FAM47DPA6NHR8 397 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 ITGA4P13612 1032 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 MX2P20592 715 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 EIF3EP60228 445 aaKnown RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 BAATQ14032 418 aaPredicted RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 GIT2Q14161 759 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.26
CDC6-201ENST00000209728 CCDC124Q96CT7 223 aaKnown RBP13.4□□□□□ -0.26
CDC6-201ENST00000209728 FAM237AA0A1B0GTK4 181 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CAND2O75155 1236 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 FAM153BP0C7A2 387 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CASP2P42575 452 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 SH3BGRP55822 239 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 FAM153CQ494X1 144 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 MEI1Q5TIA1 1274 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 HHIPL2Q6UWX4 724 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 SLC30A10Q6XR72 485 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 MCEEQ96PE7 176 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 EHD4Q9H223 541 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 JPH1Q9HDC5 661 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 FAM153AQ9UHL3 310 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 LRRC10BA6NIK2 292 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CLGNO14967 610 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CNGA1P29973 690 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 RYBPQ8N488 228 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 MRPL4Q9BYD3 311 aaKnown RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 CYP26B1Q9NR63 512 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 PSMC6P62333 389 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 CAPRIN2Q6IMN6 1127 aaKnown RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
CDC6-201ENST00000209728 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 SENP1Q9P0U3 644 aa13.39□□□□□ -0.27
CDC6-201ENST00000209728 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms